Project name: project 1

Status: done

Started: 2026-02-13 06:21:09
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Chain sequence(s) A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:03:28)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:29)
Show buried residues

Minimal score value
-3.5207
Maximal score value
0.5993
Average score
-1.1008
Total score value
-142.0053

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 K A -1.5958
2 V A 0.3471
3 F A -0.1978
4 G A -0.7450
5 R A -1.1235
6 C A -1.2490
7 E A -1.7472
8 L A 0.0000
9 A A 0.0000
10 A A -1.3304
11 A A -1.4415
12 M A 0.0000
13 K A -1.9322
14 R A -2.2391
15 H A -1.6532
16 G A -1.4043
17 L A 0.0000
18 D A -1.9267
19 N A -2.0719
20 Y A -1.5428
21 R A -2.2518
22 G A -1.7035
23 Y A -1.0042
24 S A -1.0283
25 L A 0.0000
26 G A 0.0000
27 N A -1.1170
28 W A 0.0000
29 V A 0.0000
30 C A 0.0000
31 A A 0.0000
32 A A 0.0000
33 K A -0.0440
34 F A 0.5993
35 E A -0.1395
36 S A 0.0000
37 N A -0.8381
38 F A -0.4312
39 N A -0.6792
40 T A 0.0000
41 Q A -1.6096
42 A A -1.1229
43 T A -1.4322
44 N A -2.7378
45 R A -3.5207
46 N A -3.0972
47 T A -1.9413
48 D A -2.8064
49 G A -2.5163
50 S A 0.0000
51 T A -2.6963
52 D A -1.7485
53 Y A -0.9111
54 G A 0.0000
55 I A 0.0000
56 L A 0.0000
57 Q A 0.0000
58 I A 0.0000
59 N A -1.2072
60 S A 0.0000
61 R A -2.2414
62 W A -0.6843
63 W A -0.6998
64 C A 0.0000
65 N A -2.0348
66 D A -1.7929
67 G A -1.8212
68 R A -2.6192
69 T A 0.0000
70 P A -1.9890
71 G A -1.9698
72 S A -2.2059
73 R A -2.3801
74 N A -1.7242
75 L A -0.6398
76 C A -0.8487
77 N A -1.2961
78 I A -0.4279
79 P A -0.8510
80 C A 0.0000
81 S A -0.4711
82 A A -0.4829
83 L A 0.0000
84 L A -0.9806
85 S A -1.4048
86 S A -1.6625
87 D A -2.1555
88 I A 0.0000
89 T A -0.8454
90 A A -0.5247
91 S A 0.0000
92 V A 0.0000
93 N A -1.0657
94 C A 0.0000
95 A A 0.0000
96 K A -1.6979
97 K A -2.4165
98 I A 0.0000
99 V A 0.0000
100 S A -2.3561
101 D A -2.8973
102 G A -2.2475
103 N A -2.0419
104 G A -2.0145
105 M A 0.0000
106 N A -1.2416
107 A A -0.5736
108 W A 0.0000
109 V A 0.5609
110 A A -0.7221
111 W A 0.0000
112 R A -3.1207
113 N A -2.9810
114 R A -2.9007
115 C A 0.0000
116 K A -3.4346
117 G A -2.3669
118 T A -1.9698
119 D A -2.3140
120 V A 0.0000
121 Q A -1.5743
122 A A -1.2714
123 W A -0.8715
124 I A -1.1161
125 R A -2.1027
126 G A -1.4051
127 C A -1.3779
128 R A -1.6219
129 L A -0.2710
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Laboratory of Theory of Biopolymers 2018