| Chain sequence(s) |
A: APTSSSTKKTQLQLEHLLLDLQMILNGINNYKNPELTLMLTFKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFSDSIISTLT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:00)
[INFO] Main: Simulation completed successfully. (00:00:01)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.1250 | |
| 2 | P | A | -0.5587 | |
| 3 | T | A | -0.6144 | |
| 4 | S | A | -1.0964 | |
| 5 | S | A | -1.4392 | |
| 6 | S | A | -1.5422 | |
| 7 | T | A | -1.3975 | |
| 8 | K | A | -2.3862 | |
| 9 | K | A | -2.3265 | |
| 10 | T | A | -1.3809 | |
| 11 | Q | A | -0.9682 | |
| 12 | L | A | -0.1148 | |
| 13 | Q | A | -0.5420 | |
| 14 | L | A | 0.0000 | |
| 15 | E | A | -0.5026 | |
| 16 | H | A | -0.5626 | |
| 17 | L | A | 0.0000 | |
| 18 | L | A | 0.2893 | |
| 19 | L | A | 1.0032 | |
| 20 | D | A | -0.0238 | |
| 21 | L | A | 0.0000 | |
| 22 | Q | A | -0.1719 | |
| 23 | M | A | -0.0382 | |
| 24 | I | A | 0.0000 | |
| 25 | L | A | -1.0043 | |
| 26 | N | A | -1.7908 | |
| 27 | G | A | -1.5707 | |
| 28 | I | A | 0.0000 | |
| 29 | N | A | -1.7498 | |
| 30 | N | A | -1.4667 | |
| 31 | Y | A | -0.1318 | |
| 32 | K | A | -1.7440 | |
| 33 | N | A | 0.0000 | |
| 34 | P | A | -0.6474 | |
| 35 | E | A | -0.2062 | |
| 36 | L | A | 0.1455 | |
| 37 | T | A | 0.6158 | |
| 38 | L | A | 1.2475 | |
| 39 | M | A | 0.0000 | |
| 40 | L | A | 0.5945 | |
| 41 | T | A | 0.4484 | |
| 42 | F | A | 0.0055 | |
| 43 | K | A | -1.2070 | |
| 44 | F | A | 0.0000 | |
| 45 | Y | A | -0.1518 | |
| 46 | M | A | -1.2478 | |
| 47 | P | A | 0.0000 | |
| 48 | K | A | -3.2215 | |
| 49 | K | A | -3.0123 | |
| 50 | A | A | 0.0000 | |
| 51 | T | A | -1.2328 | |
| 52 | E | A | -1.8243 | |
| 53 | L | A | -0.9150 | |
| 54 | K | A | -1.1897 | |
| 55 | H | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | Q | A | -0.7135 | |
| 58 | C | A | 0.0000 | |
| 59 | L | A | 0.0000 | |
| 60 | E | A | -0.9549 | |
| 61 | E | A | -1.2907 | |
| 62 | E | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.7998 | |
| 65 | P | A | -1.8644 | |
| 66 | L | A | 0.0000 | |
| 67 | E | A | -2.8773 | |
| 68 | E | A | -2.7247 | |
| 69 | V | A | 0.0000 | |
| 70 | L | A | 0.0000 | |
| 71 | N | A | -2.5698 | |
| 72 | L | A | -0.8716 | |
| 73 | A | A | 0.0000 | |
| 74 | Q | A | -2.3807 | |
| 75 | S | A | -2.2925 | |
| 76 | K | A | -2.8176 | |
| 77 | N | A | -2.4513 | |
| 78 | F | A | 0.0000 | |
| 79 | H | A | -1.3296 | |
| 80 | L | A | -1.2559 | |
| 81 | R | A | -3.2298 | |
| 82 | P | A | -2.8877 | |
| 83 | R | A | -3.8157 | |
| 84 | D | A | -2.9921 | |
| 85 | L | A | 0.0000 | |
| 86 | I | A | 0.0000 | |
| 87 | S | A | -1.6047 | |
| 88 | N | A | -1.5119 | |
| 89 | I | A | 0.0000 | |
| 90 | N | A | -0.5491 | |
| 91 | V | A | 0.8149 | |
| 92 | I | A | -0.0712 | |
| 93 | V | A | 0.0000 | |
| 94 | L | A | 0.0802 | |
| 95 | E | A | -1.1779 | |
| 96 | L | A | 0.0000 | |
| 97 | K | A | -1.3875 | |
| 98 | G | A | -1.5000 | |
| 99 | S | A | -1.5530 | |
| 100 | E | A | -2.1467 | |
| 101 | T | A | -0.9271 | |
| 102 | T | A | -0.2658 | |
| 103 | F | A | 0.0229 | |
| 104 | M | A | 0.6303 | |
| 105 | C | A | -0.7439 | |
| 106 | E | A | -2.1360 | |
| 107 | Y | A | -1.5968 | |
| 108 | A | A | -2.3016 | |
| 109 | D | A | -2.8480 | |
| 110 | E | A | -2.7868 | |
| 111 | T | A | -1.4516 | |
| 112 | A | A | 0.0000 | |
| 113 | T | A | -0.5719 | |
| 114 | I | A | 0.0000 | |
| 115 | V | A | -0.9791 | |
| 116 | E | A | -1.8763 | |
| 117 | F | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | N | A | -1.4955 | |
| 120 | R | A | -1.3776 | |
| 121 | W | A | 0.0000 | |
| 122 | I | A | -0.6189 | |
| 123 | T | A | -0.6498 | |
| 124 | F | A | 0.0000 | |
| 125 | S | A | 0.0000 | |
| 126 | D | A | -1.0359 | |
| 127 | S | A | -0.6154 | |
| 128 | I | A | -0.2892 | |
| 129 | I | A | 0.0158 | |
| 130 | S | A | -0.2540 | |
| 131 | T | A | 0.0049 | |
| 132 | L | A | 0.1688 | |
| 133 | T | A | -0.0829 |