| Chain sequence(s) |
H: QVQLVESGGGLVQPGGSLRLSCAASGSLPQGFSSYSLGWFRQAPGQGLEAVAAISGDGSETYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAAHYSTQLVGGEKSFYQYWGQGTLVTVS
T: DIVLTQSPASLSASVGETVTITCRASGNIHNYLAWYQQKQGKSPQLLVYYTTTLADGVPSRFSGSGSGTQYSLKINSLQPEDFGSYYCQHFWSTPRTFGGGTKLEIKQVQLQESGPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHTDDTARYYCARERDYRLDYWGQGTTLTVSSKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL input PDB |
| Selected Chain(s) | H,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:17)
[INFO] Main: Simulation completed successfully. (00:05:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6039 | |
| 2 | V | H | -1.1041 | |
| 3 | Q | H | -1.1161 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4956 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.3344 | |
| 8 | G | H | -0.6152 | |
| 9 | G | H | 0.1466 | |
| 10 | G | H | 0.6993 | |
| 11 | L | H | 1.3943 | |
| 12 | V | H | -0.0876 | |
| 13 | Q | H | -1.4110 | |
| 14 | P | H | -1.8527 | |
| 15 | G | H | -1.6666 | |
| 16 | G | H | -1.1931 | |
| 17 | S | H | -1.4432 | |
| 18 | L | H | -1.0658 | |
| 19 | R | H | -2.3162 | |
| 20 | L | H | 0.0000 | |
| 21 | S | H | -0.5713 | |
| 22 | C | H | 0.0000 | |
| 23 | A | H | -0.2907 | |
| 24 | A | H | -0.5140 | |
| 25 | S | H | -0.9131 | |
| 26 | G | H | -1.2479 | |
| 27 | S | H | -1.1710 | |
| 28 | L | H | -0.9458 | |
| 29 | P | H | -1.0192 | |
| 30 | Q | H | -1.3386 | |
| 31 | G | H | -1.0543 | |
| 32 | F | H | 0.0000 | |
| 33 | S | H | -1.1518 | |
| 34 | S | H | 0.0000 | |
| 35 | Y | H | 0.0000 | |
| 36 | S | H | 0.0000 | |
| 37 | L | H | 0.0000 | |
| 38 | G | H | 0.0000 | |
| 39 | W | H | 0.0000 | |
| 40 | F | H | 0.0000 | |
| 41 | R | H | -0.7449 | |
| 42 | Q | H | -1.1426 | |
| 43 | A | H | -1.2120 | |
| 44 | P | H | -0.9637 | |
| 45 | G | H | -1.3217 | |
| 46 | Q | H | -2.0467 | |
| 47 | G | H | -1.7159 | |
| 48 | L | H | -1.4567 | |
| 49 | E | H | -2.0814 | |
| 50 | A | H | 0.0000 | |
| 51 | V | H | 0.0000 | |
| 52 | A | H | 0.0000 | |
| 53 | A | H | 0.0000 | |
| 54 | I | H | 0.0000 | |
| 55 | S | H | 0.0000 | |
| 56 | G | H | 0.0000 | |
| 57 | D | H | -2.4931 | |
| 58 | G | H | -1.9209 | |
| 59 | S | H | -1.6683 | |
| 60 | E | H | -1.9963 | |
| 61 | T | H | -0.6297 | |
| 62 | Y | H | -0.2391 | |
| 63 | Y | H | -0.7690 | |
| 64 | A | H | 0.0000 | |
| 65 | D | H | -2.4966 | |
| 66 | S | H | -1.8712 | |
| 67 | V | H | 0.0000 | |
| 68 | K | H | -2.6303 | |
| 69 | G | H | -1.9291 | |
| 70 | R | H | -1.9452 | |
| 71 | F | H | 0.0000 | |
| 72 | T | H | -1.0838 | |
| 73 | I | H | 0.0000 | |
| 74 | S | H | -0.9361 | |
| 75 | R | H | -1.3966 | |
| 76 | D | H | -2.0405 | |
| 77 | N | H | -2.0752 | |
| 78 | S | H | -1.7005 | |
| 79 | K | H | -2.4187 | |
| 80 | N | H | -1.7592 | |
| 81 | T | H | -1.1221 | |
| 82 | L | H | 0.0000 | |
| 83 | Y | H | 0.0000 | |
| 84 | L | H | 0.0000 | |
| 85 | Q | H | -1.7317 | |
| 86 | M | H | 0.0000 | |
| 87 | N | H | -2.2762 | |
| 88 | S | H | -1.7194 | |
| 89 | L | H | 0.0000 | |
| 90 | R | H | -3.0146 | |
| 91 | A | H | -2.0427 | |
| 92 | E | H | -2.4700 | |
| 93 | D | H | 0.0000 | |
| 94 | T | H | -0.5635 | |
| 95 | A | H | 0.0000 | |
| 96 | V | H | 0.6600 | |
| 97 | Y | H | 0.0000 | |
| 98 | Y | H | 0.0005 | |
| 99 | C | H | 0.0000 | |
| 100 | A | H | 0.0000 | |
| 101 | A | H | 0.0000 | |
| 102 | H | H | 0.0000 | |
| 103 | Y | H | 0.5563 | |
| 104 | S | H | 0.0000 | |
| 105 | T | H | -0.5124 | |
| 106 | Q | H | -1.0287 | |
| 107 | L | H | -0.7965 | |
| 108 | V | H | 0.0000 | |
| 109 | G | H | -0.5589 | |
| 110 | G | H | -0.6609 | |
| 111 | E | H | -1.5843 | |
| 112 | K | H | -1.3026 | |
| 113 | S | H | -1.1125 | |
| 114 | F | H | 0.0000 | |
| 115 | Y | H | 0.0000 | |
| 116 | Q | H | 0.1449 | |
| 117 | Y | H | 0.1226 | |
| 118 | W | H | -0.0724 | |
| 119 | G | H | -0.3683 | |
| 120 | Q | H | -1.1468 | |
| 121 | G | H | 0.0000 | |
| 122 | T | H | 0.5582 | |
| 123 | L | H | 1.6964 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.2722 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8897 | |
| 128 | D | T | -1.3071 | |
| 129 | I | T | -0.1012 | |
| 130 | V | T | 1.0686 | |
| 131 | L | T | 0.0000 | |
| 132 | T | T | -0.5190 | |
| 133 | Q | T | -0.5639 | |
| 134 | S | T | -0.6321 | |
| 135 | P | T | -0.3770 | |
| 136 | A | T | -0.4127 | |
| 137 | S | T | -0.6860 | |
| 138 | L | T | -0.1484 | |
| 139 | S | T | -0.1016 | |
| 140 | A | T | 0.1036 | |
| 141 | S | T | 0.1940 | |
| 142 | V | T | 0.5725 | |
| 143 | G | T | -0.8735 | |
| 144 | E | T | -1.6866 | |
| 145 | T | T | -1.1361 | |
| 146 | V | T | -0.6803 | |
| 147 | T | T | -0.3631 | |
| 148 | I | T | 0.0000 | |
| 149 | T | T | -0.9068 | |
| 150 | C | T | 0.0000 | |
| 151 | R | T | -2.0470 | |
| 152 | A | T | 0.0000 | |
| 153 | S | T | -0.6074 | |
| 154 | G | T | -0.9431 | |
| 155 | N | T | -1.5482 | |
| 156 | I | T | 0.0000 | |
| 157 | H | T | -0.7225 | |
| 158 | N | T | -0.8067 | |
| 159 | Y | T | 0.0000 | |
| 160 | L | T | 0.0000 | |
| 161 | A | T | 0.0000 | |
| 162 | W | T | 0.0000 | |
| 163 | Y | T | 0.0000 | |
| 164 | Q | T | -0.9567 | |
| 165 | Q | T | 0.0000 | |
| 166 | K | T | -2.4238 | |
| 167 | Q | T | -2.2605 | |
| 168 | G | T | -2.1166 | |
| 169 | K | T | -2.6775 | |
| 170 | S | T | -1.5853 | |
| 171 | P | T | 0.0000 | |
| 172 | Q | T | -0.8512 | |
| 173 | L | T | 0.0000 | |
| 174 | L | T | 0.0000 | |
| 175 | V | T | 0.0000 | |
| 176 | Y | T | 0.0000 | |
| 177 | Y | T | -0.0984 | |
| 178 | T | T | 0.0000 | |
| 179 | T | T | -0.0866 | |
| 180 | T | T | 0.0000 | |
| 181 | L | T | 0.0000 | |
| 182 | A | T | 0.0000 | |
| 183 | D | T | -2.1857 | |
| 184 | G | T | -1.4255 | |
| 185 | V | T | 0.0000 | |
| 186 | P | T | -0.5805 | |
| 187 | S | T | -0.4305 | |
| 188 | R | T | -0.9236 | |
| 189 | F | T | 0.0000 | |
| 190 | S | T | -0.4587 | |
| 191 | G | T | 0.0000 | |
| 192 | S | T | -0.7860 | |
| 193 | G | T | -1.1916 | |
| 194 | S | T | -1.0240 | |
| 195 | G | T | -1.3200 | |
| 196 | T | T | -1.7533 | |
| 197 | Q | T | -2.2296 | |
| 198 | Y | T | 0.0000 | |
| 199 | S | T | -0.9043 | |
| 200 | L | T | 0.0000 | |
| 201 | K | T | -0.9996 | |
| 202 | I | T | 0.0000 | |
| 203 | N | T | -1.3845 | |
| 204 | S | T | -1.2943 | |
| 205 | L | T | 0.0000 | |
| 206 | Q | T | -0.9398 | |
| 207 | P | T | -0.8129 | |
| 208 | E | T | -1.8147 | |
| 209 | D | T | 0.0000 | |
| 210 | F | T | 0.0000 | |
| 211 | G | T | 0.0000 | |
| 212 | S | T | -1.0442 | |
| 213 | Y | T | 0.0000 | |
| 214 | Y | T | 0.0000 | |
| 215 | C | T | 0.0000 | |
| 216 | Q | T | 0.0000 | |
| 217 | H | T | 0.0000 | |
| 218 | F | T | 0.0000 | |
| 219 | W | T | -0.1503 | |
| 220 | S | T | -0.3254 | |
| 221 | T | T | -0.4276 | |
| 222 | P | T | -0.3975 | |
| 223 | R | T | 0.0000 | |
| 224 | T | T | 0.0784 | |
| 225 | F | T | 0.2037 | |
| 226 | G | T | 0.0000 | |
| 227 | G | T | -0.6918 | |
| 228 | G | T | -0.8406 | |
| 229 | T | T | 0.0000 | |
| 230 | K | T | -1.3531 | |
| 231 | L | T | 0.0000 | |
| 232 | E | T | -0.4667 | |
| 233 | I | T | 1.4075 | |
| 234 | K | T | 0.0000 | |
| 235 | Q | T | -1.5049 | |
| 236 | V | T | -0.8805 | |
| 237 | Q | T | -1.6808 | |
| 238 | L | T | 0.0000 | |
| 239 | Q | T | -1.7252 | |
| 240 | E | T | 0.0000 | |
| 241 | S | T | -0.7987 | |
| 242 | G | T | -0.3914 | |
| 243 | P | T | -0.0382 | |
| 244 | G | T | 0.2833 | |
| 245 | L | T | 1.3466 | |
| 246 | V | T | 0.0000 | |
| 247 | A | T | -0.3217 | |
| 248 | P | T | -1.1903 | |
| 249 | S | T | -1.1365 | |
| 250 | Q | T | -1.4945 | |
| 251 | S | T | -1.5983 | |
| 252 | L | T | 0.0000 | |
| 253 | S | T | -0.9313 | |
| 254 | I | T | 0.0000 | |
| 255 | T | T | -0.5334 | |
| 256 | C | T | 0.0000 | |
| 257 | T | T | -1.1233 | |
| 258 | V | T | 0.0000 | |
| 259 | S | T | -1.2911 | |
| 260 | G | T | -1.0883 | |
| 261 | F | T | -0.4374 | |
| 262 | S | T | -0.5236 | |
| 263 | L | T | 0.0000 | |
| 264 | T | T | -1.1460 | |
| 265 | G | T | -1.1602 | |
| 266 | Y | T | -0.4029 | |
| 267 | G | T | 0.0000 | |
| 268 | V | T | 0.0000 | |
| 269 | N | T | 0.0000 | |
| 270 | W | T | 0.0000 | |
| 271 | V | T | 0.0000 | |
| 272 | R | T | 0.0000 | |
| 273 | Q | T | -1.1806 | |
| 274 | P | T | -1.5048 | |
| 275 | P | T | -1.1698 | |
| 276 | G | T | -1.4370 | |
| 277 | K | T | -2.1521 | |
| 278 | G | T | -1.3498 | |
| 279 | L | T | 0.0000 | |
| 280 | E | T | -0.9524 | |
| 281 | W | T | 0.0000 | |
| 282 | L | T | 0.0000 | |
| 283 | G | T | 0.0000 | |
| 284 | M | T | 0.0000 | |
| 285 | I | T | 0.0000 | |
| 286 | W | T | 0.0000 | |
| 287 | G | T | -1.5613 | |
| 288 | D | T | -2.6869 | |
| 289 | G | T | -2.1097 | |
| 290 | N | T | -2.1305 | |
| 291 | T | T | -1.1916 | |
| 292 | D | T | -1.0340 | |
| 293 | Y | T | -0.8211 | |
| 294 | N | T | -1.0813 | |
| 295 | S | T | -1.1273 | |
| 296 | A | T | -0.5775 | |
| 297 | L | T | -1.0216 | |
| 298 | K | T | -1.9746 | |
| 299 | S | T | -1.3893 | |
| 300 | R | T | -1.5906 | |
| 301 | L | T | 0.0000 | |
| 302 | S | T | -1.1354 | |
| 303 | I | T | 0.0000 | |
| 304 | S | T | -0.9839 | |
| 305 | K | T | -1.4489 | |
| 306 | D | T | -2.2692 | |
| 307 | N | T | -2.5623 | |
| 308 | S | T | -2.0258 | |
| 309 | K | T | -2.6509 | |
| 310 | S | T | -1.9639 | |
| 311 | Q | T | -1.6559 | |
| 312 | V | T | 0.0000 | |
| 313 | F | T | -0.3646 | |
| 314 | L | T | 0.0000 | |
| 315 | K | T | -1.4919 | |
| 316 | M | T | 0.0000 | |
| 317 | N | T | -2.2397 | |
| 318 | S | T | -1.4645 | |
| 319 | L | T | 0.0000 | |
| 320 | H | T | -1.9225 | |
| 321 | T | T | -1.4587 | |
| 322 | D | T | -2.1709 | |
| 323 | D | T | 0.0000 | |
| 324 | T | T | -0.8398 | |
| 325 | A | T | 0.0000 | |
| 326 | R | T | -0.9463 | |
| 327 | Y | T | 0.0000 | |
| 328 | Y | T | 0.0000 | |
| 329 | C | T | 0.0000 | |
| 330 | A | T | 0.0000 | |
| 331 | R | T | 0.0000 | |
| 332 | E | T | 0.0000 | |
| 333 | R | T | -0.6951 | |
| 334 | D | T | -0.8668 | |
| 335 | Y | T | 0.0000 | |
| 336 | R | T | -0.4080 | |
| 337 | L | T | 0.0000 | |
| 338 | D | T | -0.2667 | |
| 339 | Y | T | 0.3088 | |
| 340 | W | T | -0.2454 | |
| 341 | G | T | 0.0000 | |
| 342 | Q | T | -1.9717 | |
| 343 | G | T | -1.3154 | |
| 344 | T | T | -0.8760 | |
| 345 | T | T | -0.4543 | |
| 346 | L | T | 0.0000 | |
| 347 | T | T | 0.0065 | |
| 348 | V | T | 0.0000 | |
| 349 | S | T | -0.4183 | |
| 350 | S | T | 0.0000 | |
| 1 | K | T | -1.4307 | |
| 2 | V | T | 0.4037 | |
| 3 | F | T | -0.2885 | |
| 4 | G | T | -0.8867 | |
| 5 | R | T | -1.0222 | |
| 6 | C | T | -1.3291 | |
| 7 | E | T | -2.1390 | |
| 8 | L | T | 0.0000 | |
| 9 | A | T | 0.0000 | |
| 10 | A | T | -1.5842 | |
| 11 | A | T | -1.6154 | |
| 12 | M | T | 0.0000 | |
| 13 | K | T | -1.7339 | |
| 14 | R | T | -2.3314 | |
| 15 | H | T | -1.6466 | |
| 16 | G | T | -1.0659 | |
| 17 | L | T | 0.0000 | |
| 18 | D | T | -0.7963 | |
| 19 | N | T | 0.0000 | |
| 20 | Y | T | 0.0000 | |
| 21 | R | T | -1.0046 | |
| 22 | G | T | -0.6667 | |
| 23 | Y | T | 0.0000 | |
| 24 | S | T | 0.0000 | |
| 25 | L | T | 0.0000 | |
| 26 | G | T | 0.0000 | |
| 27 | N | T | 0.0000 | |
| 28 | W | T | 0.0000 | |
| 29 | V | T | 0.0000 | |
| 30 | C | T | 0.0000 | |
| 31 | A | T | 0.0000 | |
| 32 | A | T | 0.0000 | |
| 33 | K | T | -0.8887 | |
| 34 | F | T | -0.2932 | |
| 35 | E | T | -0.3924 | |
| 36 | S | T | 0.0000 | |
| 37 | N | T | -1.1583 | |
| 38 | F | T | -0.6419 | |
| 39 | N | T | -0.9374 | |
| 40 | T | T | 0.0000 | |
| 41 | Q | T | -1.3741 | |
| 42 | A | T | -1.0900 | |
| 43 | T | T | -1.3520 | |
| 44 | N | T | -2.0353 | |
| 45 | R | T | -2.8087 | |
| 46 | N | T | -2.1313 | |
| 47 | T | T | -1.2123 | |
| 48 | D | T | -1.5551 | |
| 49 | G | T | -1.6435 | |
| 50 | S | T | 0.0000 | |
| 51 | T | T | 0.0000 | |
| 52 | D | T | -1.1517 | |
| 53 | Y | T | 0.0000 | |
| 54 | G | T | 0.0000 | |
| 55 | I | T | 0.0000 | |
| 56 | L | T | 0.0000 | |
| 57 | Q | T | 0.0000 | |
| 58 | I | T | 0.0000 | |
| 59 | N | T | 0.0000 | |
| 60 | S | T | 0.0000 | |
| 61 | R | T | -1.2170 | |
| 62 | W | T | -0.0894 | |
| 63 | W | T | -0.3131 | |
| 64 | C | T | 0.0000 | |
| 65 | N | T | -1.8618 | |
| 66 | D | T | -1.6099 | |
| 67 | G | T | -1.8973 | |
| 68 | R | T | -2.4947 | |
| 69 | T | T | 0.0000 | |
| 70 | P | T | -1.5823 | |
| 71 | G | T | -1.4504 | |
| 72 | S | T | -1.6901 | |
| 73 | R | T | -1.9516 | |
| 74 | N | T | -1.2639 | |
| 75 | L | T | -0.3473 | |
| 76 | C | T | 0.0000 | |
| 77 | N | T | -1.2886 | |
| 78 | I | T | -0.6113 | |
| 79 | P | T | -0.8423 | |
| 80 | C | T | 0.0000 | |
| 81 | S | T | -0.4486 | |
| 82 | A | T | -0.3556 | |
| 83 | L | T | 0.0000 | |
| 84 | L | T | -0.8620 | |
| 85 | S | T | -1.2603 | |
| 86 | S | T | -1.5498 | |
| 87 | D | T | -2.1015 | |
| 88 | I | T | 0.0000 | |
| 89 | T | T | -0.9686 | |
| 90 | A | T | -0.4397 | |
| 91 | S | T | 0.0000 | |
| 92 | V | T | 0.0000 | |
| 93 | N | T | -0.9009 | |
| 94 | C | T | 0.0000 | |
| 95 | A | T | 0.0000 | |
| 96 | K | T | 0.0000 | |
| 97 | K | T | -1.5828 | |
| 98 | I | T | 0.0000 | |
| 99 | V | T | 0.0000 | |
| 100 | S | T | -1.5116 | |
| 101 | D | T | -2.0513 | |
| 102 | G | T | -1.5176 | |
| 103 | N | T | -1.8709 | |
| 104 | G | T | -1.4153 | |
| 105 | M | T | 0.0000 | |
| 106 | N | T | -0.8476 | |
| 107 | A | T | -0.0633 | |
| 108 | W | T | 0.0000 | |
| 109 | V | T | 0.6863 | |
| 110 | A | T | -0.5652 | |
| 111 | W | T | 0.0000 | |
| 112 | R | T | -2.0129 | |
| 113 | N | T | -2.3804 | |
| 114 | R | T | -2.7601 | |
| 115 | C | T | 0.0000 | |
| 116 | K | T | -2.1436 | |
| 117 | G | T | -1.6184 | |
| 118 | T | T | -1.5952 | |
| 119 | D | T | -0.8502 | |
| 120 | V | T | 0.0000 | |
| 121 | Q | T | 0.0000 | |
| 122 | A | T | -0.1608 | |
| 123 | W | T | -0.1796 | |
| 124 | I | T | 0.0000 | |
| 125 | R | T | -0.7534 | |
| 126 | G | T | -0.9479 | |
| 127 | C | T | 0.0000 | |
| 128 | R | T | -1.8015 | |
| 129 | L | T | -0.4591 |