| Chain sequence(s) |
A: TNPYARGPNPTAASLEASSAGPFTVRRRSFTVSRRPSGYGAGTVYYPTNAGGTVGAIAIVPGYTARQSSSIIKKWWGPRLASHGFVVITIDTNSTLDQPSSSSRSSQQMAALRRQVASSSLNGTSSSPIYGKKVDTARMGVMGWSMGGGGSLISAANNPSSLKKAAAPQAPWDSSSSTNFSSVTVPTLIIFACENDSSIAPVNSSSSALPIYDSMSSRRNAKQFLLEINGGSHSCANSGNSSNQALIGKKGVAWMMKRFMMDNDTRYSTFACENPNSTRRVSDFRTANCSSLEH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 29 | T | A | -0.2506 | |
| 30 | N | A | -0.6286 | |
| 31 | P | A | -0.4461 | |
| 32 | Y | A | -0.1951 | |
| 33 | A | A | -0.6695 | |
| 34 | R | A | -0.6309 | |
| 35 | G | A | -0.9785 | |
| 36 | P | A | -1.1450 | |
| 37 | N | A | -1.6309 | |
| 38 | P | A | -0.8815 | |
| 39 | T | A | -0.5701 | |
| 40 | A | A | -0.2510 | |
| 41 | A | A | -0.3850 | |
| 42 | S | A | -0.6760 | |
| 43 | L | A | 0.0000 | |
| 44 | E | A | -1.2050 | |
| 45 | A | A | -0.6888 | |
| 46 | S | A | -0.5516 | |
| 47 | A | A | -0.2413 | |
| 48 | G | A | -0.3170 | |
| 49 | P | A | -0.3598 | |
| 50 | F | A | -0.5024 | |
| 51 | T | A | -0.5474 | |
| 52 | V | A | -0.7394 | |
| 53 | R | A | -1.6932 | |
| 54 | S | A | -0.8946 | |
| 55 | F | A | -0.2195 | |
| 56 | T | A | -0.2453 | |
| 57 | V | A | 0.0000 | |
| 58 | S | A | -1.1168 | |
| 59 | R | A | -2.1250 | |
| 60 | P | A | -1.4406 | |
| 61 | S | A | -1.3136 | |
| 62 | G | A | -1.3188 | |
| 63 | Y | A | 0.0000 | |
| 64 | G | A | -1.2145 | |
| 65 | A | A | -1.0040 | |
| 66 | G | A | 0.0000 | |
| 67 | T | A | -0.1428 | |
| 68 | V | A | 0.0000 | |
| 69 | Y | A | 0.0000 | |
| 70 | Y | A | 0.0000 | |
| 71 | P | A | 0.0000 | |
| 72 | T | A | -1.0817 | |
| 73 | N | A | -1.4683 | |
| 74 | A | A | -1.0253 | |
| 75 | G | A | -1.1210 | |
| 76 | G | A | -0.9212 | |
| 77 | T | A | -0.6296 | |
| 78 | V | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | A | A | 0.0000 | |
| 81 | I | A | 0.0000 | |
| 82 | A | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | V | A | 0.0000 | |
| 85 | P | A | 0.0000 | |
| 86 | G | A | 0.0000 | |
| 87 | Y | A | 0.7246 | |
| 88 | T | A | 0.2764 | |
| 89 | A | A | -0.5065 | |
| 90 | R | A | -1.9120 | |
| 91 | Q | A | -1.3663 | |
| 92 | S | A | -1.2201 | |
| 93 | S | A | -0.9955 | |
| 94 | I | A | 0.0000 | |
| 95 | K | A | -1.2890 | |
| 96 | W | A | -0.6181 | |
| 97 | W | A | 0.0000 | |
| 98 | G | A | 0.0000 | |
| 99 | P | A | -0.5061 | |
| 100 | R | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | A | A | 0.0000 | |
| 103 | S | A | 0.0000 | |
| 104 | H | A | 0.0000 | |
| 105 | G | A | 0.0000 | |
| 106 | F | A | 0.0000 | |
| 107 | V | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | I | A | 0.0000 | |
| 110 | T | A | 0.0000 | |
| 111 | I | A | 0.0000 | |
| 112 | D | A | 0.0000 | |
| 113 | T | A | 0.0000 | |
| 114 | N | A | -1.3833 | |
| 115 | S | A | -0.6408 | |
| 116 | T | A | -0.1404 | |
| 117 | L | A | 0.8529 | |
| 118 | D | A | -0.3425 | |
| 119 | Q | A | -0.9586 | |
| 120 | P | A | 0.0000 | |
| 121 | S | A | -0.6472 | |
| 122 | S | A | -0.6657 | |
| 123 | R | A | 0.0000 | |
| 124 | S | A | 0.0000 | |
| 125 | S | A | -0.4183 | |
| 126 | Q | A | 0.0000 | |
| 127 | Q | A | 0.0000 | |
| 128 | M | A | -0.5748 | |
| 129 | A | A | -0.9184 | |
| 130 | A | A | 0.0000 | |
| 131 | L | A | 0.0000 | |
| 132 | R | A | -1.9977 | |
| 133 | Q | A | -1.4125 | |
| 134 | V | A | 0.0000 | |
| 135 | A | A | -0.8830 | |
| 136 | S | A | -0.6934 | |
| 137 | L | A | -0.3465 | |
| 138 | N | A | -0.5305 | |
| 139 | G | A | -0.5011 | |
| 140 | T | A | -0.2156 | |
| 141 | S | A | -0.2079 | |
| 142 | S | A | -0.1826 | |
| 143 | S | A | -0.0317 | |
| 144 | P | A | -0.2316 | |
| 145 | I | A | 0.0000 | |
| 146 | Y | A | 0.3523 | |
| 147 | G | A | -0.4783 | |
| 148 | K | A | -0.8279 | |
| 149 | V | A | 0.0000 | |
| 150 | D | A | -0.4954 | |
| 151 | T | A | -0.5473 | |
| 152 | A | A | -0.1224 | |
| 153 | R | A | 0.0000 | |
| 154 | M | A | -0.0549 | |
| 155 | G | A | 0.0000 | |
| 156 | V | A | 0.0000 | |
| 157 | M | A | 0.0000 | |
| 158 | G | A | 0.0000 | |
| 159 | W | A | 0.3128 | |
| 160 | S | A | 0.0000 | |
| 161 | M | A | 0.2322 | |
| 162 | G | A | 0.0000 | |
| 163 | G | A | 0.0000 | |
| 164 | G | A | 0.0000 | |
| 165 | G | A | 0.0000 | |
| 166 | S | A | 0.0000 | |
| 167 | L | A | 0.0000 | |
| 168 | I | A | -0.2073 | |
| 169 | S | A | 0.0000 | |
| 170 | A | A | 0.0000 | |
| 171 | A | A | -0.7587 | |
| 172 | N | A | -1.4731 | |
| 173 | N | A | -1.0967 | |
| 174 | P | A | -0.9560 | |
| 175 | S | A | -0.6876 | |
| 176 | L | A | 0.0000 | |
| 177 | K | A | -0.6537 | |
| 178 | A | A | 0.0000 | |
| 179 | A | A | 0.0000 | |
| 180 | A | A | 0.0000 | |
| 181 | P | A | 0.0000 | |
| 182 | Q | A | 0.0000 | |
| 183 | A | A | 0.0000 | |
| 184 | P | A | 0.0000 | |
| 185 | W | A | 0.5331 | |
| 186 | D | A | -0.4318 | |
| 187 | S | A | -0.5869 | |
| 188 | S | A | -0.6538 | |
| 189 | T | A | -1.0006 | |
| 190 | N | A | -1.7113 | |
| 191 | F | A | 0.0000 | |
| 192 | S | A | -1.2434 | |
| 193 | S | A | -1.0060 | |
| 194 | V | A | 0.0000 | |
| 195 | T | A | -0.9376 | |
| 196 | V | A | 0.0000 | |
| 197 | P | A | -0.5268 | |
| 198 | T | A | 0.0000 | |
| 199 | L | A | 0.0000 | |
| 200 | I | A | 0.0000 | |
| 201 | F | A | 0.0000 | |
| 202 | A | A | 0.0000 | |
| 203 | C | A | 0.0000 | |
| 204 | E | A | -2.3949 | |
| 205 | N | A | -1.9999 | |
| 206 | D | A | 0.0000 | |
| 207 | S | A | 0.1915 | |
| 208 | I | A | 1.7007 | |
| 209 | A | A | 0.0000 | |
| 210 | P | A | -0.4721 | |
| 211 | V | A | 0.0000 | |
| 212 | N | A | -1.4827 | |
| 213 | S | A | -0.7936 | |
| 214 | S | A | 0.0000 | |
| 215 | A | A | 0.0000 | |
| 216 | L | A | -0.8984 | |
| 217 | P | A | -1.2377 | |
| 218 | I | A | 0.0000 | |
| 219 | Y | A | 0.0000 | |
| 220 | D | A | -2.0962 | |
| 221 | S | A | -1.6304 | |
| 222 | M | A | 0.0000 | |
| 223 | S | A | -1.6610 | |
| 224 | R | A | -2.2102 | |
| 225 | N | A | 0.0000 | |
| 226 | A | A | -0.7857 | |
| 227 | K | A | 0.0000 | |
| 228 | Q | A | 0.0000 | |
| 229 | F | A | 0.0000 | |
| 230 | L | A | 0.0000 | |
| 231 | E | A | 0.0000 | |
| 232 | I | A | 0.0000 | |
| 233 | N | A | -2.6454 | |
| 234 | G | A | -2.0840 | |
| 235 | G | A | 0.0000 | |
| 236 | S | A | -0.9495 | |
| 237 | H | A | -0.2344 | |
| 238 | S | A | -0.0641 | |
| 239 | C | A | -0.7883 | |
| 240 | A | A | 0.0000 | |
| 241 | N | A | 0.0000 | |
| 242 | S | A | -0.7143 | |
| 243 | G | A | -0.8284 | |
| 244 | N | A | -0.6464 | |
| 245 | S | A | -0.5931 | |
| 246 | N | A | -0.9822 | |
| 247 | Q | A | -0.9437 | |
| 248 | A | A | -0.8383 | |
| 249 | L | A | 0.0000 | |
| 250 | I | A | 0.0000 | |
| 251 | G | A | 0.0000 | |
| 252 | K | A | -0.6126 | |
| 253 | K | A | 0.0000 | |
| 254 | G | A | 0.0000 | |
| 255 | V | A | 0.0000 | |
| 256 | A | A | 0.0000 | |
| 257 | W | A | 0.0000 | |
| 258 | M | A | 0.0000 | |
| 259 | K | A | 0.0000 | |
| 260 | R | A | 0.0000 | |
| 261 | F | A | -0.4095 | |
| 262 | M | A | 0.0000 | |
| 263 | D | A | 0.0000 | |
| 264 | N | A | -1.3552 | |
| 265 | D | A | 0.0000 | |
| 266 | T | A | -0.5497 | |
| 267 | R | A | -1.0409 | |
| 268 | Y | A | 0.0000 | |
| 269 | S | A | -0.3988 | |
| 270 | T | A | -0.7101 | |
| 271 | F | A | -0.4475 | |
| 272 | A | A | 0.0000 | |
| 273 | C | A | -1.0048 | |
| 274 | E | A | -2.2550 | |
| 275 | N | A | -1.8908 | |
| 276 | P | A | -1.5673 | |
| 277 | N | A | -2.0116 | |
| 278 | S | A | -1.5452 | |
| 279 | T | A | -1.4878 | |
| 280 | R | A | -2.5597 | |
| 281 | V | A | -1.7649 | |
| 282 | S | A | -1.5090 | |
| 283 | D | A | -1.1386 | |
| 284 | F | A | -0.7666 | |
| 285 | R | A | -1.1691 | |
| 286 | T | A | -0.9743 | |
| 287 | A | A | -1.0391 | |
| 288 | N | A | -1.5612 | |
| 289 | C | A | 0.0000 | |
| 290 | S | A | -0.6131 | |
| 291 | L | A | 0.0656 | |
| 292 | E | A | -1.7623 | |
| 293 | H | A | -1.5283 |