| Chain sequence(s) |
H: EVQLVESGGGLVQPGGSLRISCAASGLTFTGYWMNWVRQAPGKGLEWVANIKEDGSEKYYVDSVKGRFTISRDNAKNSLYLQMNSLRVEDTAVYYCARLRWLRGNFDHWGQGTLVTVSSASTKGPSVFPLAPTAALGCLVKDYFPEPVTVSWNGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
L: FMLTQPHSVSESPGKTVTISCTGSNGYIANNYVQWYQQRPGSVPTVVIYEDNQRPSGVPDRFSGSIDSSSNSASLIISGLKTEDEADYYCQSYDTPNVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:01)
[INFO] Main: Simulation completed successfully. (00:03:03)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9998 | |
| 2 | V | H | -1.0857 | |
| 3 | Q | H | -1.2308 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.4340 | |
| 6 | E | H | -0.2671 | |
| 7 | S | H | -0.6592 | |
| 8 | G | H | -0.9107 | |
| 9 | G | H | -0.9025 | |
| 11 | G | H | -0.6518 | |
| 12 | L | H | -0.1972 | |
| 13 | V | H | 0.0000 | |
| 14 | Q | H | -1.4884 | |
| 15 | P | H | -1.3410 | |
| 16 | G | H | -1.3481 | |
| 17 | G | H | -1.2084 | |
| 18 | S | H | -1.3066 | |
| 19 | L | H | -1.1223 | |
| 20 | R | H | -2.0256 | |
| 21 | I | H | 0.0000 | |
| 22 | S | H | -0.4545 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.4475 | |
| 25 | A | H | -0.5628 | |
| 26 | S | H | -0.8806 | |
| 27 | G | H | -1.0009 | |
| 28 | L | H | -0.4909 | |
| 29 | T | H | -0.2993 | |
| 30 | F | H | 0.0000 | |
| 35 | T | H | -1.2042 | |
| 36 | G | H | -1.0043 | |
| 37 | Y | H | -0.5710 | |
| 38 | W | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | N | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -0.8688 | |
| 45 | A | H | -1.1436 | |
| 46 | P | H | -0.9808 | |
| 47 | G | H | -1.4661 | |
| 48 | K | H | -2.3024 | |
| 49 | G | H | -1.5758 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -1.1945 | |
| 52 | W | H | 0.0000 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | N | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | K | H | -1.6809 | |
| 58 | E | H | -2.0072 | |
| 59 | D | H | -2.6539 | |
| 62 | G | H | -2.0065 | |
| 63 | S | H | -1.5094 | |
| 64 | E | H | -1.4947 | |
| 65 | K | H | -1.0947 | |
| 66 | Y | H | -0.5577 | |
| 67 | Y | H | -0.8155 | |
| 68 | V | H | -1.1709 | |
| 69 | D | H | -2.3872 | |
| 70 | S | H | -1.7961 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.5604 | |
| 74 | G | H | -1.7585 | |
| 75 | R | H | -1.7522 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8483 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5322 | |
| 80 | R | H | -1.3876 | |
| 81 | D | H | -1.8999 | |
| 82 | N | H | -2.0250 | |
| 83 | A | H | -1.3928 | |
| 84 | K | H | -2.2687 | |
| 85 | N | H | -1.6505 | |
| 86 | S | H | 0.0000 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.4553 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.0964 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.6740 | |
| 93 | S | H | -1.3390 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -1.8683 | |
| 96 | V | H | -0.2089 | |
| 97 | E | H | -1.4971 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.2732 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.1019 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | 0.0000 | |
| 107 | L | H | 0.0000 | |
| 108 | R | H | -1.5321 | |
| 109 | W | H | 0.0522 | |
| 110 | L | H | 0.1030 | |
| 112 | R | H | -0.8277 | |
| 113 | G | H | 0.0000 | |
| 114 | N | H | 0.0000 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | -1.0487 | |
| 117 | H | H | -0.8021 | |
| 118 | W | H | -0.2854 | |
| 119 | G | H | 0.0000 | |
| 120 | Q | H | -1.0404 | |
| 121 | G | H | -0.4490 | |
| 122 | T | H | -0.3306 | |
| 123 | L | H | -0.0103 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.2717 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5379 | |
| 128 | S | H | -0.4044 | |
| 129 | A | H | -0.4999 | |
| 130 | S | H | -0.4565 | |
| 131 | T | H | -0.8329 | |
| 132 | K | H | -0.9448 | |
| 133 | G | H | -1.2399 | |
| 134 | P | H | -0.5707 | |
| 135 | S | H | -0.3357 | |
| 136 | V | H | 0.0000 | |
| 137 | F | H | 0.0000 | |
| 138 | P | H | -0.6953 | |
| 139 | L | H | 0.0000 | |
| 140 | A | H | -0.0904 | |
| 141 | P | H | -0.0602 | |
| 142 | T | H | -0.2244 | |
| 143 | A | H | -0.0979 | |
| 144 | A | H | -0.0539 | |
| 145 | L | H | 0.0000 | |
| 146 | G | H | 0.0000 | |
| 147 | C | H | 0.0000 | |
| 148 | L | H | 0.0000 | |
| 149 | V | H | 0.0000 | |
| 150 | K | H | -0.3825 | |
| 151 | D | H | -0.5417 | |
| 152 | Y | H | 0.0000 | |
| 153 | F | H | -0.1864 | |
| 154 | P | H | 0.0000 | |
| 155 | E | H | -0.7712 | |
| 156 | P | H | -0.7800 | |
| 157 | V | H | -0.4161 | |
| 158 | T | H | -0.5289 | |
| 159 | V | H | -0.2867 | |
| 160 | S | H | -0.3315 | |
| 161 | W | H | -0.4405 | |
| 162 | N | H | -1.1179 | |
| 163 | G | H | -0.0571 | |
| 164 | V | H | 0.6262 | |
| 165 | H | H | -0.3304 | |
| 166 | T | H | -0.1439 | |
| 167 | F | H | 0.0000 | |
| 168 | P | H | -0.1389 | |
| 169 | A | H | 0.2175 | |
| 170 | V | H | 0.0000 | |
| 171 | L | H | 1.1174 | |
| 172 | Q | H | 0.2033 | |
| 173 | S | H | -0.1497 | |
| 174 | S | H | -0.2184 | |
| 175 | G | H | 0.0846 | |
| 176 | L | H | 0.1365 | |
| 177 | Y | H | 0.3647 | |
| 178 | S | H | 0.0000 | |
| 179 | L | H | 0.0000 | |
| 180 | S | H | 0.0000 | |
| 181 | S | H | 0.0000 | |
| 182 | V | H | 0.1498 | |
| 183 | V | H | 0.0000 | |
| 184 | T | H | 0.0032 | |
| 185 | V | H | -0.0025 | |
| 186 | P | H | -0.2489 | |
| 187 | S | H | -0.3407 | |
| 188 | S | H | -0.4528 | |
| 189 | S | H | -0.4659 | |
| 190 | L | H | -0.0706 | |
| 191 | G | H | -0.6135 | |
| 192 | T | H | -0.7128 | |
| 193 | Q | H | -1.1255 | |
| 194 | T | H | -0.6127 | |
| 195 | Y | H | -0.3392 | |
| 196 | I | H | -0.8390 | |
| 197 | C | H | 0.0000 | |
| 198 | N | H | -1.5112 | |
| 199 | V | H | 0.0000 | |
| 200 | N | H | -1.7365 | |
| 201 | H | H | 0.0000 | |
| 202 | K | H | -2.6963 | |
| 203 | P | H | -1.5509 | |
| 204 | S | H | -1.7022 | |
| 205 | N | H | -2.3473 | |
| 206 | T | H | -1.9597 | |
| 207 | K | H | -2.5989 | |
| 208 | V | H | -1.5707 | |
| 209 | D | H | -2.5184 | |
| 210 | K | H | -1.7720 | |
| 211 | K | H | -1.7755 | |
| 212 | V | H | -0.0207 | |
| 2 | F | L | 0.5802 | |
| 3 | M | L | 0.9586 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.2491 | |
| 6 | Q | L | -0.7894 | |
| 7 | P | L | -0.9354 | |
| 8 | H | L | -1.5200 | |
| 9 | S | L | -1.1768 | |
| 11 | V | L | -0.5819 | |
| 12 | S | L | -0.3405 | |
| 13 | E | L | -0.8718 | |
| 14 | S | L | -1.0475 | |
| 15 | P | L | -1.6586 | |
| 16 | G | L | -1.9500 | |
| 17 | K | L | -2.3430 | |
| 18 | T | L | -1.3510 | |
| 19 | V | L | 0.0000 | |
| 20 | T | L | -0.0932 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.1792 | |
| 23 | C | L | 0.0000 | |
| 24 | T | L | -0.1582 | |
| 25 | G | L | 0.1027 | |
| 26 | S | L | -0.1105 | |
| 27 | N | L | -0.6564 | |
| 28 | G | L | -0.1381 | |
| 29 | Y | L | 0.4367 | |
| 30 | I | L | 0.0000 | |
| 35 | A | L | -0.3705 | |
| 36 | N | L | -1.1290 | |
| 37 | N | L | -1.0519 | |
| 38 | Y | L | -0.5719 | |
| 39 | V | L | 0.0000 | |
| 40 | Q | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | -0.7688 | |
| 45 | R | L | -1.2154 | |
| 46 | P | L | -0.9319 | |
| 47 | G | L | -0.7892 | |
| 48 | S | L | -0.6045 | |
| 49 | V | L | -0.1567 | |
| 50 | P | L | 0.0000 | |
| 51 | T | L | -0.1652 | |
| 52 | V | L | 0.0000 | |
| 53 | V | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | Y | L | -1.5740 | |
| 56 | E | L | -1.8977 | |
| 57 | D | L | -1.5324 | |
| 65 | N | L | -2.3248 | |
| 66 | Q | L | -2.5830 | |
| 67 | R | L | -2.5551 | |
| 68 | P | L | -1.3725 | |
| 69 | S | L | -1.0132 | |
| 70 | G | L | -0.9390 | |
| 71 | V | L | -0.8956 | |
| 72 | P | L | -1.3749 | |
| 74 | D | L | -2.3255 | |
| 75 | R | L | -1.6027 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -1.2958 | |
| 78 | G | L | -1.0213 | |
| 79 | S | L | -0.5015 | |
| 80 | I | L | -0.0584 | |
| 81 | D | L | -0.9123 | |
| 82 | S | L | -0.6480 | |
| 83 | S | L | -0.5599 | |
| 84 | S | L | -0.5532 | |
| 85 | N | L | -0.4799 | |
| 86 | S | L | -0.3186 | |
| 87 | A | L | 0.0000 | |
| 88 | S | L | -0.2435 | |
| 89 | L | L | 0.0000 | |
| 90 | I | L | -0.0801 | |
| 91 | I | L | 0.0000 | |
| 92 | S | L | -1.3090 | |
| 93 | G | L | -1.7256 | |
| 94 | L | L | 0.0000 | |
| 95 | K | L | -2.6365 | |
| 96 | T | L | -1.6098 | |
| 97 | E | L | -2.1058 | |
| 98 | D | L | 0.0000 | |
| 99 | E | L | 0.0000 | |
| 100 | A | L | 0.0000 | |
| 101 | D | L | -1.2290 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | S | L | 0.0000 | |
| 107 | Y | L | 0.0000 | |
| 108 | D | L | -1.3884 | |
| 109 | T | L | -0.9832 | |
| 114 | P | L | -0.6938 | |
| 115 | N | L | -0.8796 | |
| 116 | V | L | 0.0000 | |
| 117 | V | L | -0.0989 | |
| 118 | F | L | 0.0000 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.9995 | |
| 121 | G | L | -1.2847 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.8521 | |
| 124 | L | L | 0.0000 | |
| 125 | T | L | -0.3611 | |
| 126 | V | L | 0.0000 | |
| 127 | L | L | 0.4257 | |
| 128 | G | L | -0.4391 | |
| 129 | Q | L | -0.6754 | |
| 130 | P | L | -1.1051 | |
| 131 | K | L | -2.0934 | |
| 132 | A | L | -1.2871 | |
| 133 | A | L | -0.8135 | |
| 134 | P | L | 0.0000 | |
| 135 | S | L | -0.1989 | |
| 136 | V | L | -0.3113 | |
| 137 | T | L | -0.2905 | |
| 138 | L | L | 0.0000 | |
| 139 | F | L | 0.0000 | |
| 140 | P | L | -0.0953 | |
| 141 | P | L | 0.0000 | |
| 142 | S | L | 0.0000 | |
| 143 | S | L | -1.1868 | |
| 144 | E | L | -2.0262 | |
| 145 | E | L | 0.0000 | |
| 146 | L | L | -1.9539 | |
| 147 | Q | L | -2.2462 | |
| 148 | A | L | -1.9239 | |
| 149 | N | L | -2.7785 | |
| 150 | K | L | -2.8937 | |
| 151 | A | L | 0.0000 | |
| 152 | T | L | 0.0000 | |
| 153 | L | L | 0.0000 | |
| 154 | V | L | 0.0000 | |
| 155 | C | L | 0.0000 | |
| 156 | L | L | 0.0000 | |
| 157 | I | L | 0.0000 | |
| 158 | S | L | -0.4722 | |
| 159 | D | L | -0.8747 | |
| 160 | F | L | 0.0000 | |
| 161 | Y | L | -0.9398 | |
| 162 | P | L | -0.7522 | |
| 163 | G | L | -0.4957 | |
| 164 | A | L | -0.2112 | |
| 165 | V | L | -0.0839 | |
| 166 | T | L | -0.0473 | |
| 167 | V | L | 0.1206 | |
| 168 | A | L | -0.3024 | |
| 169 | W | L | 0.0000 | |
| 170 | K | L | -1.2129 | |
| 171 | A | L | 0.0000 | |
| 172 | D | L | -1.9107 | |
| 173 | S | L | -1.1837 | |
| 174 | S | L | -1.0126 | |
| 175 | P | L | -1.0150 | |
| 176 | V | L | -0.9759 | |
| 177 | K | L | -1.6344 | |
| 178 | A | L | -0.7889 | |
| 179 | G | L | -0.5101 | |
| 180 | V | L | -0.1380 | |
| 181 | E | L | -0.1432 | |
| 182 | T | L | 0.0308 | |
| 183 | T | L | 0.0000 | |
| 184 | T | L | -0.1808 | |
| 185 | P | L | -0.2522 | |
| 186 | S | L | -0.4742 | |
| 187 | K | L | -1.0310 | |
| 188 | Q | L | -1.1539 | |
| 189 | S | L | -1.2342 | |
| 190 | N | L | -1.3390 | |
| 191 | N | L | 0.0000 | |
| 192 | K | L | -1.1376 | |
| 193 | Y | L | -0.6159 | |
| 194 | A | L | 0.0000 | |
| 195 | A | L | 0.0000 | |
| 196 | S | L | 0.0000 | |
| 197 | S | L | 0.0000 | |
| 198 | Y | L | 0.0000 | |
| 199 | L | L | 0.0000 | |
| 200 | S | L | -0.5887 | |
| 201 | L | L | 0.0000 | |
| 202 | T | L | -1.8464 | |
| 203 | P | L | -2.5264 | |
| 204 | E | L | -3.0950 | |
| 205 | Q | L | -2.2884 | |
| 206 | W | L | 0.0000 | |
| 207 | K | L | -3.0129 | |
| 208 | S | L | -2.3384 | |
| 209 | H | L | -2.4675 | |
| 210 | R | L | -2.7063 | |
| 211 | S | L | 0.0000 | |
| 212 | Y | L | 0.0000 | |
| 213 | S | L | 0.0000 | |
| 214 | C | L | 0.0000 | |
| 215 | Q | L | -0.8922 | |
| 216 | V | L | 0.0000 | |
| 217 | T | L | -0.6275 | |
| 218 | H | L | 0.0000 | |
| 219 | E | L | -2.3085 | |
| 220 | G | L | -1.3636 | |
| 221 | S | L | -0.9522 | |
| 222 | T | L | -0.5920 | |
| 223 | V | L | -0.5265 | |
| 224 | E | L | -1.8283 | |
| 225 | K | L | -1.8532 | |
| 226 | T | L | -1.1251 | |
| 227 | V | L | -0.3938 | |
| 228 | A | L | -0.6687 | |
| 229 | P | L | -0.9639 | |
| 230 | T | L | -0.3229 |