| Chain sequence(s) |
L: KVPGDVSYAVPEQWYD
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:12)
[INFO] Main: Simulation completed successfully. (00:00:13)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 113 | K | L | -1.6171 | |
| 114 | V | L | 0.0945 | |
| 115 | P | L | -0.2573 | |
| 116 | G | L | -0.8231 | |
| 117 | D | L | -1.4621 | |
| 118 | V | L | 1.1826 | |
| 119 | S | L | 0.3021 | |
| 120 | Y | L | 1.2778 | |
| 121 | A | L | 0.6005 | |
| 122 | V | L | 0.9407 | |
| 123 | P | L | -0.4134 | |
| 124 | E | L | -1.9212 | |
| 125 | Q | L | -0.6427 | |
| 126 | W | L | 1.3734 | |
| 127 | Y | L | 1.2116 | |
| 128 | D | L | -1.5911 |