| Chain sequence(s) |
A: GPPITNPEPELKDTDEYVTPTDLLFIAETDLIEETGHPTKDIIENGKVVIPKVSALQYRVFKLTLPDPNKFPLPSKDFVDFSTEKLIWRLKAFKIEKYGELGKGSYGHSNWNRLGDVTNPTEYQQEGADDTVALSWRPVLRQEYIIGDEPPIGVYTARAAPAPGLPPGAPPPLTEVRTIIEHGDMADIGFGARDFAALEPRKNEVPDIILDTVTKVPDYDGMLADPTGRRLFTHNKYTKSYDVERYRLDGPDLFPLPDAPPPSPLYVKPPPSSPYAVRPSTRLFTLPDEGEITKEDEIFNKPIFLEKTAGKNNGILWHNQLYITVLDNSRATIETIETQVSTPAPNVYDPSNYVTSKRYTEKYKLSFIIQLCKIPLTPETLELLKRIDESILVNWNLPDIPPIEREDPYKGKKFIELDLTNKLSTDLSKSELGRLYLNR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:01)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -0.3253 | |
| 2 | P | A | -0.0950 | |
| 3 | P | A | 0.2843 | |
| 4 | I | A | 1.3386 | |
| 5 | T | A | -0.1696 | |
| 6 | N | A | -1.4526 | |
| 7 | P | A | -1.8344 | |
| 8 | E | A | -2.8602 | |
| 9 | P | A | -2.3380 | |
| 10 | E | A | -2.6636 | |
| 11 | L | A | -1.7533 | |
| 12 | K | A | -2.1728 | |
| 13 | D | A | -2.1862 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.6829 | |
| 16 | E | A | -2.7959 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | T | A | -0.8559 | |
| 20 | P | A | -0.8590 | |
| 21 | T | A | -0.9086 | |
| 22 | D | A | -1.6583 | |
| 23 | L | A | -0.5400 | |
| 24 | L | A | -0.2723 | |
| 25 | F | A | 0.0000 | |
| 26 | I | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | E | A | -1.1687 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -1.5813 | |
| 31 | L | A | -0.1603 | |
| 32 | I | A | 0.0000 | |
| 33 | E | A | -1.9261 | |
| 34 | E | A | -1.4574 | |
| 35 | T | A | -0.8511 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -1.4437 | |
| 38 | P | A | 0.0000 | |
| 39 | T | A | -1.6925 | |
| 40 | K | A | -1.8680 | |
| 41 | D | A | -0.7389 | |
| 42 | I | A | 0.8694 | |
| 43 | I | A | 1.0413 | |
| 44 | E | A | -1.3201 | |
| 45 | N | A | -2.0473 | |
| 46 | G | A | -1.3714 | |
| 47 | K | A | -1.0843 | |
| 48 | V | A | 1.2524 | |
| 49 | V | A | 1.7578 | |
| 50 | I | A | 1.5151 | |
| 51 | P | A | 0.3460 | |
| 52 | K | A | -0.9508 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | A | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | Y | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | K | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | T | A | -1.1767 | |
| 65 | L | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.2492 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.0373 | |
| 70 | K | A | -1.8344 | |
| 71 | F | A | -0.7880 | |
| 72 | P | A | -0.6332 | |
| 73 | L | A | -0.6350 | |
| 74 | P | A | -0.6824 | |
| 75 | S | A | -1.4962 | |
| 76 | K | A | -2.7858 | |
| 77 | D | A | -2.7837 | |
| 78 | F | A | -1.4356 | |
| 79 | V | A | 0.0000 | |
| 80 | D | A | -2.1310 | |
| 81 | F | A | -0.4231 | |
| 82 | S | A | -0.4497 | |
| 83 | T | A | -0.5846 | |
| 84 | E | A | -0.8238 | |
| 85 | K | A | -0.5357 | |
| 86 | L | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | K | A | -0.6423 | |
| 92 | A | A | 0.0000 | |
| 93 | F | A | 0.0000 | |
| 94 | K | A | 0.0000 | |
| 95 | I | A | 0.0000 | |
| 96 | E | A | -0.7574 | |
| 97 | K | A | 0.0000 | |
| 98 | Y | A | -0.3415 | |
| 99 | G | A | -1.1080 | |
| 100 | E | A | -2.0577 | |
| 101 | L | A | -1.1110 | |
| 102 | G | A | -0.9569 | |
| 103 | K | A | -1.6257 | |
| 104 | G | A | 0.0000 | |
| 105 | S | A | -0.6423 | |
| 106 | Y | A | 0.0000 | |
| 107 | G | A | -0.9142 | |
| 108 | H | A | -1.2629 | |
| 109 | S | A | -0.9803 | |
| 110 | N | A | -1.9787 | |
| 111 | W | A | 0.0000 | |
| 112 | N | A | 0.0000 | |
| 113 | R | A | -1.2320 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.3989 | |
| 117 | V | A | -0.8302 | |
| 118 | T | A | -1.0391 | |
| 119 | N | A | -1.9470 | |
| 120 | P | A | -1.3945 | |
| 121 | T | A | -1.4087 | |
| 122 | E | A | -2.1868 | |
| 123 | Y | A | -0.9758 | |
| 124 | Q | A | -1.8269 | |
| 125 | Q | A | -1.8573 | |
| 126 | E | A | -2.2592 | |
| 127 | G | A | -1.8166 | |
| 128 | A | A | -1.7418 | |
| 129 | D | A | -2.4981 | |
| 130 | D | A | -1.9879 | |
| 131 | T | A | -1.3074 | |
| 132 | V | A | -0.4526 | |
| 133 | A | A | -0.3037 | |
| 134 | L | A | -0.2129 | |
| 135 | S | A | -0.4241 | |
| 136 | W | A | 0.0000 | |
| 137 | R | A | -0.5514 | |
| 138 | P | A | 0.0000 | |
| 139 | V | A | -0.2947 | |
| 140 | L | A | 0.0000 | |
| 141 | R | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | E | A | 0.0000 | |
| 144 | Y | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | I | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | D | A | 0.0000 | |
| 149 | E | A | -0.2927 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | I | A | -0.1305 | |
| 153 | G | A | 0.0000 | |
| 154 | V | A | -0.5895 | |
| 155 | Y | A | -0.7301 | |
| 156 | T | A | -0.8604 | |
| 157 | A | A | -0.6644 | |
| 158 | R | A | -1.1507 | |
| 159 | A | A | -0.3785 | |
| 160 | A | A | -0.1902 | |
| 161 | P | A | -0.2946 | |
| 162 | A | A | -0.1583 | |
| 163 | P | A | -0.3684 | |
| 164 | G | A | -0.4090 | |
| 165 | L | A | -0.0217 | |
| 166 | P | A | -0.3762 | |
| 167 | P | A | -0.5454 | |
| 168 | G | A | -0.3989 | |
| 169 | A | A | -0.1344 | |
| 170 | P | A | -0.1313 | |
| 171 | P | A | -0.1822 | |
| 172 | P | A | 0.2183 | |
| 173 | L | A | 0.5398 | |
| 174 | T | A | -0.6106 | |
| 175 | E | A | -1.8089 | |
| 176 | V | A | -1.3201 | |
| 177 | R | A | -1.8203 | |
| 178 | T | A | -0.6148 | |
| 179 | I | A | -0.4818 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | -1.0861 | |
| 182 | H | A | -0.9992 | |
| 183 | G | A | -0.7278 | |
| 184 | D | A | -0.6215 | |
| 185 | M | A | 0.0000 | |
| 186 | A | A | 0.0000 | |
| 187 | D | A | -0.1820 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | -0.2896 | |
| 190 | F | A | -0.0828 | |
| 191 | G | A | -0.3132 | |
| 192 | A | A | -0.3273 | |
| 193 | R | A | -0.5839 | |
| 194 | D | A | -0.7769 | |
| 195 | F | A | 0.0000 | |
| 196 | A | A | -1.2600 | |
| 197 | A | A | -0.6740 | |
| 198 | L | A | -0.7897 | |
| 199 | E | A | -1.4194 | |
| 200 | P | A | -1.5351 | |
| 201 | R | A | -2.1189 | |
| 202 | K | A | -3.0711 | |
| 203 | N | A | -2.1402 | |
| 204 | E | A | -1.4180 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | D | A | -2.3962 | |
| 208 | I | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | L | A | -1.7777 | |
| 211 | D | A | -2.1171 | |
| 212 | T | A | -0.9510 | |
| 213 | V | A | -0.2190 | |
| 214 | T | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | V | A | 0.2302 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | -0.6033 | |
| 219 | Y | A | -0.5475 | |
| 220 | D | A | -1.5536 | |
| 221 | G | A | -1.0735 | |
| 222 | M | A | 0.0000 | |
| 223 | L | A | 0.1388 | |
| 224 | A | A | -0.2509 | |
| 225 | D | A | -0.5545 | |
| 226 | P | A | -0.7519 | |
| 227 | T | A | -0.5088 | |
| 228 | G | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | R | A | -0.2228 | |
| 231 | L | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | T | A | -0.4278 | |
| 234 | H | A | -0.9239 | |
| 235 | N | A | -1.2658 | |
| 236 | K | A | -1.4020 | |
| 237 | Y | A | -0.6038 | |
| 238 | T | A | -0.4408 | |
| 239 | K | A | -0.5485 | |
| 240 | S | A | -0.5315 | |
| 241 | Y | A | -0.2891 | |
| 242 | D | A | -1.0734 | |
| 243 | V | A | 0.3256 | |
| 244 | E | A | -1.0413 | |
| 245 | R | A | -1.6009 | |
| 246 | Y | A | 0.0000 | |
| 247 | R | A | -0.3302 | |
| 248 | L | A | 0.0000 | |
| 249 | D | A | -1.4371 | |
| 250 | G | A | -0.7020 | |
| 251 | P | A | -0.3129 | |
| 252 | D | A | 0.4402 | |
| 253 | L | A | 1.8008 | |
| 254 | F | A | 2.3321 | |
| 255 | P | A | 0.6315 | |
| 256 | L | A | 0.6487 | |
| 257 | P | A | -0.3864 | |
| 258 | D | A | -1.8631 | |
| 259 | A | A | -0.7229 | |
| 260 | P | A | -0.8013 | |
| 261 | P | A | -0.3333 | |
| 262 | P | A | -0.0308 | |
| 263 | S | A | 0.1585 | |
| 264 | P | A | 0.6550 | |
| 265 | L | A | 1.4930 | |
| 266 | Y | A | 1.4407 | |
| 267 | V | A | 1.7107 | |
| 268 | K | A | 0.3316 | |
| 269 | P | A | 0.3109 | |
| 270 | P | A | -0.0841 | |
| 271 | P | A | -0.1684 | |
| 272 | S | A | -0.1348 | |
| 273 | S | A | 0.2217 | |
| 274 | P | A | 0.3112 | |
| 275 | Y | A | 1.1109 | |
| 276 | A | A | 0.8111 | |
| 277 | V | A | 1.1724 | |
| 278 | R | A | -0.3111 | |
| 279 | P | A | -0.5745 | |
| 280 | S | A | 0.0000 | |
| 281 | T | A | 0.1507 | |
| 282 | R | A | 0.1419 | |
| 283 | L | A | 1.0210 | |
| 284 | F | A | 0.2882 | |
| 285 | T | A | -0.3595 | |
| 286 | L | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | D | A | -0.5551 | |
| 289 | E | A | 0.0000 | |
| 290 | G | A | -1.0332 | |
| 291 | E | A | -1.9053 | |
| 292 | I | A | -1.6034 | |
| 293 | T | A | -1.8918 | |
| 294 | K | A | -2.8720 | |
| 295 | E | A | -2.8591 | |
| 296 | D | A | -1.8758 | |
| 297 | E | A | -1.5805 | |
| 298 | I | A | -1.1703 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.2980 | |
| 301 | K | A | -1.6642 | |
| 302 | P | A | -0.6638 | |
| 303 | I | A | -0.0045 | |
| 304 | F | A | -0.3044 | |
| 305 | L | A | 0.0000 | |
| 306 | E | A | -2.5557 | |
| 307 | K | A | -2.7671 | |
| 308 | T | A | -1.3759 | |
| 309 | A | A | -0.2968 | |
| 310 | G | A | -0.4795 | |
| 311 | K | A | -1.3310 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | L | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.5417 | |
| 319 | N | A | -0.5342 | |
| 320 | Q | A | -0.5454 | |
| 321 | L | A | 0.0000 | |
| 322 | Y | A | 0.0000 | |
| 323 | I | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | L | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | S | A | 0.0000 | |
| 330 | R | A | 0.0000 | |
| 331 | A | A | 0.0000 | |
| 332 | T | A | -0.9757 | |
| 333 | I | A | -0.9069 | |
| 334 | E | A | -1.5827 | |
| 335 | T | A | -1.2806 | |
| 336 | I | A | -0.5020 | |
| 337 | E | A | -1.1848 | |
| 338 | T | A | -0.1807 | |
| 339 | Q | A | -0.1790 | |
| 340 | V | A | 1.4388 | |
| 341 | S | A | 0.5296 | |
| 342 | T | A | 0.0336 | |
| 343 | P | A | 0.1486 | |
| 344 | A | A | 0.1793 | |
| 345 | P | A | -0.1428 | |
| 346 | N | A | -0.3076 | |
| 347 | V | A | 1.5151 | |
| 348 | Y | A | 1.3583 | |
| 349 | D | A | 0.0758 | |
| 350 | P | A | 0.0552 | |
| 351 | S | A | 0.1507 | |
| 352 | N | A | 0.2639 | |
| 353 | Y | A | 0.6879 | |
| 354 | V | A | 1.3652 | |
| 355 | T | A | -0.3164 | |
| 356 | S | A | -1.1093 | |
| 357 | K | A | -2.2748 | |
| 358 | R | A | -1.7432 | |
| 359 | Y | A | 0.0000 | |
| 360 | T | A | -0.9636 | |
| 361 | E | A | 0.0000 | |
| 362 | K | A | -1.0680 | |
| 363 | Y | A | 0.0000 | |
| 364 | K | A | -0.9273 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | 0.0000 | |
| 367 | F | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | I | A | 0.0000 | |
| 370 | Q | A | -0.3962 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.5636 | |
| 374 | I | A | 0.0000 | |
| 375 | P | A | -0.5858 | |
| 376 | L | A | -0.4015 | |
| 377 | T | A | -0.9245 | |
| 378 | P | A | -1.4921 | |
| 379 | E | A | -2.4298 | |
| 380 | T | A | 0.0000 | |
| 381 | L | A | -1.9050 | |
| 382 | E | A | -3.2902 | |
| 383 | L | A | 0.0000 | |
| 384 | L | A | 0.0000 | |
| 385 | K | A | -3.4364 | |
| 386 | R | A | -2.4935 | |
| 387 | I | A | -1.5599 | |
| 388 | D | A | -1.9103 | |
| 389 | E | A | -3.0713 | |
| 390 | S | A | -1.6187 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | 0.0000 | |
| 393 | V | A | -1.2956 | |
| 394 | N | A | -1.3377 | |
| 395 | W | A | -0.8891 | |
| 396 | N | A | -1.4313 | |
| 397 | L | A | -1.1421 | |
| 398 | P | A | -1.3067 | |
| 399 | D | A | -1.9879 | |
| 400 | I | A | -1.0005 | |
| 401 | P | A | -0.5168 | |
| 402 | P | A | -0.4150 | |
| 403 | I | A | 0.3742 | |
| 404 | E | A | -1.8467 | |
| 405 | R | A | -2.1345 | |
| 406 | E | A | -3.1121 | |
| 407 | D | A | -2.9820 | |
| 408 | P | A | -1.9688 | |
| 409 | Y | A | 0.0000 | |
| 410 | K | A | -3.1507 | |
| 411 | G | A | -2.2327 | |
| 412 | K | A | -2.5468 | |
| 413 | K | A | -2.7363 | |
| 414 | F | A | -1.4315 | |
| 415 | I | A | -1.1435 | |
| 416 | E | A | -2.2096 | |
| 417 | L | A | -1.7312 | |
| 418 | D | A | -2.4617 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.4076 | |
| 421 | N | A | -1.8863 | |
| 422 | K | A | -1.8636 | |
| 423 | L | A | -0.7339 | |
| 424 | S | A | -0.8613 | |
| 425 | T | A | -0.5013 | |
| 426 | D | A | -1.3371 | |
| 427 | L | A | 0.0000 | |
| 428 | S | A | -1.6177 | |
| 429 | K | A | -2.5809 | |
| 430 | S | A | 0.0000 | |
| 431 | E | A | -2.1535 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.9951 | |
| 435 | L | A | -0.6676 | |
| 436 | Y | A | -0.2894 | |
| 437 | L | A | 0.1422 | |
| 438 | N | A | -1.4918 | |
| 439 | R | A | -1.8815 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine