| Chain sequence(s) |
A: DRDSCVDKSRCAKYGYYQECQDCCKNAGHNGGTCMFFKCKCA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:25)
[INFO] Main: Simulation completed successfully. (00:00:26)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.5196 | |
| 2 | R | A | -2.4771 | |
| 3 | D | A | -3.1371 | |
| 4 | S | A | -2.6074 | |
| 5 | C | A | -2.3864 | |
| 6 | V | A | -1.9013 | |
| 7 | D | A | -2.6434 | |
| 8 | K | A | -3.3803 | |
| 9 | S | A | 0.0000 | |
| 10 | R | A | -2.5768 | |
| 11 | C | A | -0.8683 | |
| 12 | A | A | 0.4834 | |
| 13 | K | A | 0.5333 | |
| 14 | Y | A | 1.6617 | |
| 15 | G | A | 1.1537 | |
| 16 | Y | A | 0.6558 | |
| 17 | Y | A | -0.9044 | |
| 18 | Q | A | -2.2658 | |
| 19 | E | A | -3.0442 | |
| 20 | C | A | 0.0000 | |
| 21 | Q | A | -2.7507 | |
| 22 | D | A | -3.8414 | |
| 23 | C | A | -2.6841 | |
| 24 | C | A | 0.0000 | |
| 25 | K | A | -3.6389 | |
| 26 | N | A | -2.9033 | |
| 27 | A | A | -2.1341 | |
| 28 | G | A | -2.1616 | |
| 29 | H | A | -1.7774 | |
| 30 | N | A | -2.5963 | |
| 31 | G | A | -2.3175 | |
| 32 | G | A | -1.1979 | |
| 33 | T | A | 0.4453 | |
| 34 | C | A | 0.0000 | |
| 35 | M | A | 1.8361 | |
| 36 | F | A | 2.4479 | |
| 37 | F | A | 1.6308 | |
| 38 | K | A | -0.4458 | |
| 39 | C | A | 0.0000 | |
| 40 | K | A | -0.1096 | |
| 41 | C | A | -0.6002 | |
| 42 | A | A | -0.7204 |