Project name: query_structure

Status: done

Started: 2026-03-16 23:03:50
Settings
Chain sequence(s) A: DRDSCVDKSRCAKYGYYQECQDCCKNAGHNGGTCMFFKCKCA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:25)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:26)
Show buried residues

Minimal score value
-3.8414
Maximal score value
2.4479
Average score
-1.1844
Total score value
-49.7433

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 D A -2.5196
2 R A -2.4771
3 D A -3.1371
4 S A -2.6074
5 C A -2.3864
6 V A -1.9013
7 D A -2.6434
8 K A -3.3803
9 S A 0.0000
10 R A -2.5768
11 C A -0.8683
12 A A 0.4834
13 K A 0.5333
14 Y A 1.6617
15 G A 1.1537
16 Y A 0.6558
17 Y A -0.9044
18 Q A -2.2658
19 E A -3.0442
20 C A 0.0000
21 Q A -2.7507
22 D A -3.8414
23 C A -2.6841
24 C A 0.0000
25 K A -3.6389
26 N A -2.9033
27 A A -2.1341
28 G A -2.1616
29 H A -1.7774
30 N A -2.5963
31 G A -2.3175
32 G A -1.1979
33 T A 0.4453
34 C A 0.0000
35 M A 1.8361
36 F A 2.4479
37 F A 1.6308
38 K A -0.4458
39 C A 0.0000
40 K A -0.1096
41 C A -0.6002
42 A A -0.7204
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Laboratory of Theory of Biopolymers 2018