| Chain sequence(s) |
A: FQKGHQF
C: FQKGHQF B: FQKGHQF D: FQKGHQF input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:40)
[INFO] Main: Simulation completed successfully. (00:03:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 1.3235 | |
| 2 | Q | A | 0.3186 | |
| 3 | K | A | -1.2088 | |
| 4 | G | A | -0.7285 | |
| 5 | H | A | -0.7593 | |
| 6 | Q | A | -0.8347 | |
| 7 | F | A | 1.3125 | |
| 1 | F | B | 1.0987 | |
| 2 | Q | B | -0.1762 | |
| 3 | K | B | 0.0000 | |
| 4 | G | B | 0.0000 | |
| 5 | H | B | -0.9534 | |
| 6 | Q | B | -1.3936 | |
| 7 | F | B | 1.3691 | |
| 1 | F | C | 2.3145 | |
| 2 | Q | C | 1.0243 | |
| 3 | K | C | -0.2214 | |
| 4 | G | C | -1.4127 | |
| 5 | H | C | -1.0835 | |
| 6 | Q | C | -0.7356 | |
| 7 | F | C | 2.5230 | |
| 1 | F | D | 1.5916 | |
| 2 | Q | D | -0.0249 | |
| 3 | K | D | -1.7226 | |
| 4 | G | D | -1.2376 | |
| 5 | H | D | -1.0004 | |
| 6 | Q | D | -0.8946 | |
| 7 | F | D | 2.1828 |