Project name: query_structure

Status: done

Started: 2026-03-16 23:37:56
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Chain sequence(s) A: GSSVSSVPTKLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYYSYYNIFFADSPSSINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:26)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:27)
Show buried residues

Minimal score value
-2.6313
Maximal score value
3.4386
Average score
-0.2116
Total score value
-20.5214

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.4371
2 S A -0.1536
3 S A 0.3525
4 V A 1.4538
5 S A 0.5246
6 S A 0.0599
7 V A -0.4132
8 P A 0.0000
9 T A -1.3583
10 K A -2.6313
11 L A 0.0000
12 E A -1.5850
13 V A 0.2776
14 V A 1.6252
15 A A 0.9302
16 A A 0.2938
17 T A -0.3826
18 P A -0.8161
19 T A -0.5334
20 S A -0.3137
21 L A 0.0000
22 L A 0.7711
23 I A 0.0000
24 S A -0.6647
25 W A 0.0000
26 D A -2.5446
27 A A -1.2574
28 S A -0.9617
29 S A -0.6065
30 S A -0.4275
31 S A -0.2508
32 V A 0.0000
33 S A 0.3607
34 Y A 0.1117
35 Y A 0.0000
36 R A -0.4591
37 I A 0.0000
38 T A 0.0000
39 Y A -0.3737
40 G A 0.0000
41 E A -1.2376
42 T A -1.2051
43 G A -1.3061
44 G A -1.1795
45 N A -1.5991
46 S A -0.7897
47 P A -0.3096
48 V A 0.3529
49 Q A -1.1164
50 E A -1.7776
51 F A -0.6650
52 T A -0.1926
53 V A 0.0636
54 P A -0.2263
55 G A -0.2409
56 S A -0.3549
57 S A -0.3979
58 S A -0.6033
59 T A -0.2116
60 A A 0.0000
61 T A 0.2453
62 I A 0.0000
63 S A -0.4714
64 G A -0.6778
65 L A 0.0000
66 S A -0.8101
67 P A -1.0154
68 G A -1.1318
69 V A -0.9541
70 D A -1.7580
71 Y A 0.0000
72 T A -0.7162
73 I A 0.0000
74 T A -0.4552
75 V A 0.0000
76 Y A 0.0757
77 A A 0.0000
78 Y A 1.1497
79 Y A 0.0000
80 S A 1.8531
81 Y A 2.0909
82 Y A 1.8883
83 N A 1.0358
84 I A 3.1825
85 F A 3.4386
86 F A 2.4715
87 A A 0.8744
88 D A 0.0215
89 S A -0.2598
90 P A -0.3132
91 S A 0.0000
92 S A -0.6360
93 I A -0.7278
94 N A -1.6344
95 Y A -1.3528
96 R A -2.3212
97 T A -1.2076
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Laboratory of Theory of Biopolymers 2018