Project name: fold_rfinf_37_22024_10_30_14_46_model_4

Status: done

Started: 2026-03-26 12:05:04
Settings
Chain sequence(s) B: GVKEREELKKKAAELEAAKAAAEAAGDKAKAEALKAAATKAKVEYLLLS
input PDB
Selected Chain(s) B
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with B chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:34)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:35)
Show buried residues

Minimal score value
-5.1802
Maximal score value
2.3331
Average score
-2.0138
Total score value
-98.6759

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G B -1.0719
2 V B -0.4774
3 K B -3.1552
4 E B -3.7464
5 R B -3.1728
6 E B -4.3075
7 E B -4.9548
8 L B -4.2279
9 K B -4.7952
10 K B -5.1802
11 K B -4.6888
12 A B 0.0000
13 A B -3.2978
14 E B -3.5435
15 L B -2.9391
16 E B -3.1465
17 A B -1.9460
18 A B -1.6597
19 K B -2.8872
20 A B -1.7430
21 A B -1.1204
22 A B 0.0000
23 E B -3.3402
24 A B -1.3137
25 A B -1.4298
26 G B -2.0814
27 D B -2.9916
28 K B -3.7769
29 A B -2.7498
30 K B -3.3057
31 A B 0.0000
32 E B -3.5120
33 A B -1.8646
34 L B -2.5024
35 K B -3.0680
36 A B -1.9175
37 A B -1.6549
38 A B 0.0000
39 T B -1.7783
40 K B -2.1563
41 A B 0.0000
42 K B -1.9178
43 V B 0.0492
44 E B -0.9924
45 Y B -1.1154
46 L B 1.5919
47 L B 2.3331
48 L B 1.9149
49 S B 0.9650
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Laboratory of Theory of Biopolymers 2018