| Chain sequence(s) |
B: GVKEREELKKKAAELEAAKAAAEAAGDKAKAEALKAAATKAKVEYLLLS
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:34)
[INFO] Main: Simulation completed successfully. (00:01:35)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | B | -1.0719 | |
| 2 | V | B | -0.4774 | |
| 3 | K | B | -3.1552 | |
| 4 | E | B | -3.7464 | |
| 5 | R | B | -3.1728 | |
| 6 | E | B | -4.3075 | |
| 7 | E | B | -4.9548 | |
| 8 | L | B | -4.2279 | |
| 9 | K | B | -4.7952 | |
| 10 | K | B | -5.1802 | |
| 11 | K | B | -4.6888 | |
| 12 | A | B | 0.0000 | |
| 13 | A | B | -3.2978 | |
| 14 | E | B | -3.5435 | |
| 15 | L | B | -2.9391 | |
| 16 | E | B | -3.1465 | |
| 17 | A | B | -1.9460 | |
| 18 | A | B | -1.6597 | |
| 19 | K | B | -2.8872 | |
| 20 | A | B | -1.7430 | |
| 21 | A | B | -1.1204 | |
| 22 | A | B | 0.0000 | |
| 23 | E | B | -3.3402 | |
| 24 | A | B | -1.3137 | |
| 25 | A | B | -1.4298 | |
| 26 | G | B | -2.0814 | |
| 27 | D | B | -2.9916 | |
| 28 | K | B | -3.7769 | |
| 29 | A | B | -2.7498 | |
| 30 | K | B | -3.3057 | |
| 31 | A | B | 0.0000 | |
| 32 | E | B | -3.5120 | |
| 33 | A | B | -1.8646 | |
| 34 | L | B | -2.5024 | |
| 35 | K | B | -3.0680 | |
| 36 | A | B | -1.9175 | |
| 37 | A | B | -1.6549 | |
| 38 | A | B | 0.0000 | |
| 39 | T | B | -1.7783 | |
| 40 | K | B | -2.1563 | |
| 41 | A | B | 0.0000 | |
| 42 | K | B | -1.9178 | |
| 43 | V | B | 0.0492 | |
| 44 | E | B | -0.9924 | |
| 45 | Y | B | -1.1154 | |
| 46 | L | B | 1.5919 | |
| 47 | L | B | 2.3331 | |
| 48 | L | B | 1.9149 | |
| 49 | S | B | 0.9650 |