| Chain sequence(s) |
A: ARPKDRPSYCNLPADSGSGTKPEQRIYYNSAKKQCVTFTYNGKGGNGNNFSRTNDCRQTCQYPVG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:53)
[INFO] Main: Simulation completed successfully. (00:00:53)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | A | A | -0.9103 | |
| 2 | R | A | -2.3131 | |
| 3 | P | A | -2.5987 | |
| 4 | K | A | -3.6943 | |
| 5 | D | A | -3.4743 | |
| 6 | R | A | -3.1291 | |
| 7 | P | A | -1.6870 | |
| 8 | S | A | -0.7460 | |
| 9 | Y | A | 0.5692 | |
| 10 | C | A | 0.0000 | |
| 11 | N | A | -0.9072 | |
| 12 | L | A | 0.0104 | |
| 13 | P | A | -0.5903 | |
| 14 | A | A | -0.7530 | |
| 15 | D | A | -1.7947 | |
| 16 | S | A | -1.8556 | |
| 17 | G | A | -2.0179 | |
| 18 | S | A | -1.3900 | |
| 19 | G | A | -1.6699 | |
| 20 | T | A | -1.7066 | |
| 21 | K | A | -2.5802 | |
| 22 | P | A | -2.1025 | |
| 23 | E | A | -2.0515 | |
| 24 | Q | A | -1.9230 | |
| 25 | R | A | -1.2866 | |
| 26 | I | A | -0.6344 | |
| 27 | Y | A | -0.2105 | |
| 28 | Y | A | 0.0000 | |
| 29 | N | A | 0.0000 | |
| 30 | S | A | -1.1382 | |
| 31 | A | A | -1.3076 | |
| 32 | K | A | -1.8891 | |
| 33 | K | A | -1.2431 | |
| 34 | Q | A | -0.7343 | |
| 35 | C | A | -0.2918 | |
| 36 | V | A | 0.1865 | |
| 37 | T | A | -0.1694 | |
| 38 | F | A | 0.0000 | |
| 39 | T | A | -1.1517 | |
| 40 | Y | A | -1.7568 | |
| 41 | N | A | -2.1767 | |
| 42 | G | A | -2.3056 | |
| 43 | K | A | -2.8464 | |
| 44 | G | A | -2.0744 | |
| 45 | G | A | -1.8246 | |
| 46 | N | A | -1.7256 | |
| 47 | G | A | -1.3548 | |
| 48 | N | A | 0.0000 | |
| 49 | N | A | -0.9196 | |
| 50 | F | A | -1.3911 | |
| 51 | S | A | -1.8201 | |
| 52 | R | A | -3.3371 | |
| 53 | T | A | -2.6827 | |
| 54 | N | A | -3.7485 | |
| 55 | D | A | -3.9338 | |
| 56 | C | A | 0.0000 | |
| 57 | R | A | -3.5829 | |
| 58 | Q | A | -3.3644 | |
| 59 | T | A | -2.0150 | |
| 60 | C | A | 0.0000 | |
| 61 | Q | A | -1.0166 | |
| 62 | Y | A | 0.7376 | |
| 63 | P | A | 0.5757 | |
| 64 | V | A | 1.4664 | |
| 65 | G | A | 0.5609 |