Project name: 3f1e8040d22ffe

Status: done

Started: 2025-07-14 09:09:13
Settings
Chain sequence(s) H: QVQLVQSGAEVKKPGASVKVSCKASGYIFTDYYMHWVRQVPGQGLEWMGRINPNSGGTNYEQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDLSIVIVTTTMGDVFDIWGQGTMVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPLTFGGGTKVEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:23)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:25)
Show buried residues

Minimal score value
-3.0787
Maximal score value
3.5846
Average score
-0.5045
Total score value
-121.0807

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.3786
2 V H -0.5216
3 Q H -0.8927
4 L H 0.0000
5 V H 0.1890
6 Q H 0.0000
7 S H -0.5937
8 G H -0.5481
9 A H 0.0499
11 E H -0.0221
12 V H 0.9302
13 K H -0.9101
14 K H -2.3299
15 P H -2.5116
16 G H -2.2162
17 A H -1.7405
18 S H -1.7994
19 V H 0.0000
20 K H -2.0322
21 V H 0.0000
22 S H -0.6783
23 C H 0.0000
24 K H -0.6912
25 A H 0.0000
26 S H -0.1944
27 G H -0.4651
28 Y H 0.5761
29 I H 1.8728
30 F H 0.0000
35 T H -0.0661
36 D H 0.6539
37 Y H 1.2127
38 Y H 0.3858
39 M H 0.0000
40 H H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -0.3354
45 V H -0.4119
46 P H -0.5577
47 G H -1.1106
48 Q H -1.5720
49 G H -1.0082
50 L H 0.0000
51 E H -0.5925
52 W H 0.0000
53 M H 0.0000
54 G H 0.0000
55 R H 0.0000
56 I H 0.0000
57 N H -0.8992
58 P H 0.0000
59 N H -1.5326
62 S H -1.1976
63 G H -1.0937
64 G H -0.9421
65 T H -0.4979
66 N H -0.8343
67 Y H -1.1185
68 E H -1.7267
69 Q H -2.5994
70 K H -2.7352
71 F H 0.0000
72 Q H -2.4271
74 G H -1.7158
75 R H -1.6219
76 V H 0.0000
77 T H -0.8230
78 M H 0.0000
79 T H -0.5615
80 R H -1.0052
81 D H -0.8838
82 T H -0.2903
83 S H 0.2751
84 I H 1.0608
85 S H 0.3205
86 T H 0.0000
87 A H 0.0000
88 Y H -0.7774
89 M H 0.0000
90 E H -1.3931
91 L H 0.0000
92 S H -1.8136
93 R H -2.7497
94 L H 0.0000
95 R H -3.0787
96 S H -2.1711
97 D H -2.1217
98 D H 0.0000
99 T H -0.6134
100 A H 0.0000
101 V H 0.2679
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H 0.0000
107 D H 0.0000
108 L H 0.9524
109 S H 1.4201
110 I H 3.0068
111 V H 2.5444
111A I H 3.5846
111B V H 3.0874
111C T H 1.3577
112C T H 0.7055
112B T H 0.5368
112A M H 1.2428
112 G H 0.0000
113 D H 0.0000
114 V H 0.0000
115 F H 0.0000
116 D H 0.0000
117 I H 0.2736
118 W H 0.0000
119 G H 0.0000
120 Q H -1.0424
121 G H -0.4973
122 T H 0.0000
123 M H 0.3635
124 V H 0.0000
125 T H -0.2192
126 V H 0.0000
127 S H -1.1198
128 S H -0.7891
1 D L -1.6240
2 I L 0.0000
3 V L 0.7608
4 M L 0.0000
5 T L -0.9040
6 Q L -1.4579
7 S L -1.5340
8 P L -1.3940
9 D L -2.3191
10 S L -1.5121
11 L L -0.7275
12 A L -0.3816
13 V L -0.9162
14 S L -0.9229
15 L L -0.0066
16 G L -1.2628
17 E L -2.6929
18 R L -2.7668
19 A L 0.0000
20 T L -0.8737
21 I L 0.0000
22 N L -1.6915
23 C L 0.0000
24 K L -2.3762
25 S L 0.0000
26 S L -0.9746
27 Q L -1.5840
28 S L -0.9668
29 V L 0.0000
30 L L -0.3870
31 Y L -0.5062
32 S L -1.0629
33 S L -1.1137
34 N L -1.8589
35 N L -2.0067
36 K L -1.3324
37 N L -0.5072
38 Y L 0.2163
39 L L 0.0000
40 A L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.1698
46 P L -0.8862
47 G L -1.2360
48 Q L -1.6565
49 P L -1.0147
50 P L 0.0000
51 K L -0.7081
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 Y L 0.0780
56 W L 0.0540
57 A L 0.0000
65 S L -0.5178
66 T L -0.3756
67 R L -1.1478
68 E L -0.9364
69 S L -0.6671
70 G L -0.9357
71 V L -0.9483
72 P L -1.2464
74 D L -2.1560
75 R L -1.5332
76 F L 0.0000
77 S L -0.8332
78 G L -0.4831
79 S L -0.7232
80 G L -1.2126
83 S L -1.1188
84 G L -1.1002
85 T L -1.6104
86 D L -2.2824
87 F L 0.0000
88 T L -1.0626
89 L L 0.0000
90 T L -0.6834
91 I L 0.0000
92 S L -1.7469
93 S L -1.8181
94 L L 0.0000
95 Q L -1.3819
96 A L -0.7627
97 E L -1.9164
98 D L 0.0000
99 V L -0.2653
100 A L 0.0000
101 V L -0.5547
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 Y L 0.0000
108 Y L 0.4100
109 S L -0.2112
113 T L -0.0783
114 P L -0.3060
115 P L -0.8026
116 L L 0.0000
117 T L -0.0453
118 F L 0.0000
119 G L 0.0000
120 G L -0.9245
121 G L -1.2390
122 T L 0.0000
123 K L -1.5677
124 V L 0.0000
125 E L -0.7084
126 I L 0.0648
127 K L -1.2238
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Laboratory of Theory of Biopolymers 2018