Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCKASGYIFTDYYMHWVRQVPGQGLEWMGRINPNSGGTNYEQKFQGRVTMTRDTSISTAYMELSRLRSDDTAVYYCARDLSIVIVTTTMGDVFDIWGQGTMVTVSS
L: DIVMTQSPDSLAVSLGERATINCKSSQSVLYSSNNKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPPLTFGGGTKVEIK input PDB |
Selected Chain(s) | H,L |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimalization (00:00:01) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:23) [INFO] Main: Simulation completed successfully. (00:01:25) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | H | -1.3786 | |
2 | V | H | -0.5216 | |
3 | Q | H | -0.8927 | |
4 | L | H | 0.0000 | |
5 | V | H | 0.1890 | |
6 | Q | H | 0.0000 | |
7 | S | H | -0.5937 | |
8 | G | H | -0.5481 | |
9 | A | H | 0.0499 | |
11 | E | H | -0.0221 | |
12 | V | H | 0.9302 | |
13 | K | H | -0.9101 | |
14 | K | H | -2.3299 | |
15 | P | H | -2.5116 | |
16 | G | H | -2.2162 | |
17 | A | H | -1.7405 | |
18 | S | H | -1.7994 | |
19 | V | H | 0.0000 | |
20 | K | H | -2.0322 | |
21 | V | H | 0.0000 | |
22 | S | H | -0.6783 | |
23 | C | H | 0.0000 | |
24 | K | H | -0.6912 | |
25 | A | H | 0.0000 | |
26 | S | H | -0.1944 | |
27 | G | H | -0.4651 | |
28 | Y | H | 0.5761 | |
29 | I | H | 1.8728 | |
30 | F | H | 0.0000 | |
35 | T | H | -0.0661 | |
36 | D | H | 0.6539 | |
37 | Y | H | 1.2127 | |
38 | Y | H | 0.3858 | |
39 | M | H | 0.0000 | |
40 | H | H | 0.0000 | |
41 | W | H | 0.0000 | |
42 | V | H | 0.0000 | |
43 | R | H | 0.0000 | |
44 | Q | H | -0.3354 | |
45 | V | H | -0.4119 | |
46 | P | H | -0.5577 | |
47 | G | H | -1.1106 | |
48 | Q | H | -1.5720 | |
49 | G | H | -1.0082 | |
50 | L | H | 0.0000 | |
51 | E | H | -0.5925 | |
52 | W | H | 0.0000 | |
53 | M | H | 0.0000 | |
54 | G | H | 0.0000 | |
55 | R | H | 0.0000 | |
56 | I | H | 0.0000 | |
57 | N | H | -0.8992 | |
58 | P | H | 0.0000 | |
59 | N | H | -1.5326 | |
62 | S | H | -1.1976 | |
63 | G | H | -1.0937 | |
64 | G | H | -0.9421 | |
65 | T | H | -0.4979 | |
66 | N | H | -0.8343 | |
67 | Y | H | -1.1185 | |
68 | E | H | -1.7267 | |
69 | Q | H | -2.5994 | |
70 | K | H | -2.7352 | |
71 | F | H | 0.0000 | |
72 | Q | H | -2.4271 | |
74 | G | H | -1.7158 | |
75 | R | H | -1.6219 | |
76 | V | H | 0.0000 | |
77 | T | H | -0.8230 | |
78 | M | H | 0.0000 | |
79 | T | H | -0.5615 | |
80 | R | H | -1.0052 | |
81 | D | H | -0.8838 | |
82 | T | H | -0.2903 | |
83 | S | H | 0.2751 | |
84 | I | H | 1.0608 | |
85 | S | H | 0.3205 | |
86 | T | H | 0.0000 | |
87 | A | H | 0.0000 | |
88 | Y | H | -0.7774 | |
89 | M | H | 0.0000 | |
90 | E | H | -1.3931 | |
91 | L | H | 0.0000 | |
92 | S | H | -1.8136 | |
93 | R | H | -2.7497 | |
94 | L | H | 0.0000 | |
95 | R | H | -3.0787 | |
96 | S | H | -2.1711 | |
97 | D | H | -2.1217 | |
98 | D | H | 0.0000 | |
99 | T | H | -0.6134 | |
100 | A | H | 0.0000 | |
101 | V | H | 0.2679 | |
102 | Y | H | 0.0000 | |
103 | Y | H | 0.0000 | |
104 | C | H | 0.0000 | |
105 | A | H | 0.0000 | |
106 | R | H | 0.0000 | |
107 | D | H | 0.0000 | |
108 | L | H | 0.9524 | |
109 | S | H | 1.4201 | |
110 | I | H | 3.0068 | |
111 | V | H | 2.5444 | |
111A | I | H | 3.5846 | |
111B | V | H | 3.0874 | |
111C | T | H | 1.3577 | |
112C | T | H | 0.7055 | |
112B | T | H | 0.5368 | |
112A | M | H | 1.2428 | |
112 | G | H | 0.0000 | |
113 | D | H | 0.0000 | |
114 | V | H | 0.0000 | |
115 | F | H | 0.0000 | |
116 | D | H | 0.0000 | |
117 | I | H | 0.2736 | |
118 | W | H | 0.0000 | |
119 | G | H | 0.0000 | |
120 | Q | H | -1.0424 | |
121 | G | H | -0.4973 | |
122 | T | H | 0.0000 | |
123 | M | H | 0.3635 | |
124 | V | H | 0.0000 | |
125 | T | H | -0.2192 | |
126 | V | H | 0.0000 | |
127 | S | H | -1.1198 | |
128 | S | H | -0.7891 | |
1 | D | L | -1.6240 | |
2 | I | L | 0.0000 | |
3 | V | L | 0.7608 | |
4 | M | L | 0.0000 | |
5 | T | L | -0.9040 | |
6 | Q | L | -1.4579 | |
7 | S | L | -1.5340 | |
8 | P | L | -1.3940 | |
9 | D | L | -2.3191 | |
10 | S | L | -1.5121 | |
11 | L | L | -0.7275 | |
12 | A | L | -0.3816 | |
13 | V | L | -0.9162 | |
14 | S | L | -0.9229 | |
15 | L | L | -0.0066 | |
16 | G | L | -1.2628 | |
17 | E | L | -2.6929 | |
18 | R | L | -2.7668 | |
19 | A | L | 0.0000 | |
20 | T | L | -0.8737 | |
21 | I | L | 0.0000 | |
22 | N | L | -1.6915 | |
23 | C | L | 0.0000 | |
24 | K | L | -2.3762 | |
25 | S | L | 0.0000 | |
26 | S | L | -0.9746 | |
27 | Q | L | -1.5840 | |
28 | S | L | -0.9668 | |
29 | V | L | 0.0000 | |
30 | L | L | -0.3870 | |
31 | Y | L | -0.5062 | |
32 | S | L | -1.0629 | |
33 | S | L | -1.1137 | |
34 | N | L | -1.8589 | |
35 | N | L | -2.0067 | |
36 | K | L | -1.3324 | |
37 | N | L | -0.5072 | |
38 | Y | L | 0.2163 | |
39 | L | L | 0.0000 | |
40 | A | L | 0.0000 | |
41 | W | L | 0.0000 | |
42 | Y | L | 0.0000 | |
43 | Q | L | 0.0000 | |
44 | Q | L | 0.0000 | |
45 | K | L | -1.1698 | |
46 | P | L | -0.8862 | |
47 | G | L | -1.2360 | |
48 | Q | L | -1.6565 | |
49 | P | L | -1.0147 | |
50 | P | L | 0.0000 | |
51 | K | L | -0.7081 | |
52 | L | L | 0.0000 | |
53 | L | L | 0.0000 | |
54 | I | L | 0.0000 | |
55 | Y | L | 0.0780 | |
56 | W | L | 0.0540 | |
57 | A | L | 0.0000 | |
65 | S | L | -0.5178 | |
66 | T | L | -0.3756 | |
67 | R | L | -1.1478 | |
68 | E | L | -0.9364 | |
69 | S | L | -0.6671 | |
70 | G | L | -0.9357 | |
71 | V | L | -0.9483 | |
72 | P | L | -1.2464 | |
74 | D | L | -2.1560 | |
75 | R | L | -1.5332 | |
76 | F | L | 0.0000 | |
77 | S | L | -0.8332 | |
78 | G | L | -0.4831 | |
79 | S | L | -0.7232 | |
80 | G | L | -1.2126 | |
83 | S | L | -1.1188 | |
84 | G | L | -1.1002 | |
85 | T | L | -1.6104 | |
86 | D | L | -2.2824 | |
87 | F | L | 0.0000 | |
88 | T | L | -1.0626 | |
89 | L | L | 0.0000 | |
90 | T | L | -0.6834 | |
91 | I | L | 0.0000 | |
92 | S | L | -1.7469 | |
93 | S | L | -1.8181 | |
94 | L | L | 0.0000 | |
95 | Q | L | -1.3819 | |
96 | A | L | -0.7627 | |
97 | E | L | -1.9164 | |
98 | D | L | 0.0000 | |
99 | V | L | -0.2653 | |
100 | A | L | 0.0000 | |
101 | V | L | -0.5547 | |
102 | Y | L | 0.0000 | |
103 | Y | L | 0.0000 | |
104 | C | L | 0.0000 | |
105 | Q | L | 0.0000 | |
106 | Q | L | 0.0000 | |
107 | Y | L | 0.0000 | |
108 | Y | L | 0.4100 | |
109 | S | L | -0.2112 | |
113 | T | L | -0.0783 | |
114 | P | L | -0.3060 | |
115 | P | L | -0.8026 | |
116 | L | L | 0.0000 | |
117 | T | L | -0.0453 | |
118 | F | L | 0.0000 | |
119 | G | L | 0.0000 | |
120 | G | L | -0.9245 | |
121 | G | L | -1.2390 | |
122 | T | L | 0.0000 | |
123 | K | L | -1.5677 | |
124 | V | L | 0.0000 | |
125 | E | L | -0.7084 | |
126 | I | L | 0.0648 | |
127 | K | L | -1.2238 |