Project name: 3f22dbb10e33428

Status: done

Started: 2026-04-12 14:14:53
Settings
Chain sequence(s) A: FYGHKYF
C: FYGHKYF
B: FYGHKYF
D: FYGHKYF
input PDB
Selected Chain(s) A,C,B,D
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:30)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-1.2781
Maximal score value
4.0452
Average score
1.5602
Total score value
43.6844

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 3.0826
2 Y A 2.5997
3 G A 0.7358
4 H A -0.1942
5 K A 0.5063
6 Y A 2.4840
7 F A 3.5027
1 F B 2.7233
2 Y B 2.7104
3 G B 0.0000
4 H B -0.1189
5 K B 0.6351
6 Y B 2.7209
7 F B 4.0452
1 F C 2.9766
2 Y C 2.6242
3 G C 0.6341
4 H C -0.5163
5 K C -0.0012
6 Y C 1.8791
7 F C 3.4429
1 F D 2.9086
2 Y D 2.3822
3 G D 0.3844
4 H D -1.2781
5 K D -1.1373
6 Y D 1.1969
7 F D 2.7554
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Laboratory of Theory of Biopolymers 2018