Chain sequence(s) |
A: QVQLVESGGGLVQPGGSLRLSCAASASSPSAKMLRWGWFRQAPGQGLEAVAQSEDEAKKIGIPNAKDPRFTISRDNSKNTLYLQMNSLRAEDTAVYYCADATLLDTEEQLAERGDWGQGTLVTVSS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimalization (00:00:00) [INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:17) [INFO] Main: Simulation completed successfully. (00:01:17) |
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan3D score | mutation |
---|---|---|---|---|
residue index | residue name | chain | Aggrescan3D score | |
1 | Q | A | -1.5653 | |
2 | V | A | -0.9248 | |
3 | Q | A | -1.2920 | |
4 | L | A | 0.0000 | |
5 | V | A | 0.8741 | |
6 | E | A | 0.3383 | |
7 | S | A | -0.2988 | |
8 | G | A | -0.8087 | |
9 | G | A | 0.0898 | |
10 | G | A | 0.6336 | |
11 | L | A | 1.3284 | |
12 | V | A | 0.0000 | |
13 | Q | A | -1.4637 | |
14 | P | A | -1.7317 | |
15 | G | A | -1.4774 | |
16 | G | A | -1.0177 | |
17 | S | A | -1.3917 | |
18 | L | A | -1.1517 | |
19 | R | A | -2.2925 | |
20 | L | A | 0.0000 | |
21 | S | A | -0.5533 | |
22 | C | A | 0.0000 | |
23 | A | A | -0.2335 | |
24 | A | A | -0.3694 | |
25 | S | A | -0.7051 | |
26 | A | A | -0.7469 | |
27 | S | A | -0.7752 | |
28 | S | A | -0.7733 | |
29 | P | A | -0.7258 | |
30 | S | A | -0.8428 | |
31 | A | A | -0.7957 | |
32 | K | A | -1.7992 | |
33 | M | A | -0.7798 | |
34 | L | A | -0.5274 | |
35 | R | A | -1.1053 | |
36 | W | A | 0.0000 | |
37 | G | A | 0.0000 | |
38 | W | A | 0.0000 | |
39 | F | A | 0.0000 | |
40 | R | A | -0.3069 | |
41 | Q | A | -0.7178 | |
42 | A | A | -1.0175 | |
43 | P | A | -1.1943 | |
44 | G | A | -1.2703 | |
45 | Q | A | -1.7872 | |
46 | G | A | -1.0975 | |
47 | L | A | -0.3290 | |
48 | E | A | -0.8982 | |
49 | A | A | -0.7915 | |
50 | V | A | 0.0000 | |
51 | A | A | 0.0000 | |
52 | Q | A | -1.5459 | |
53 | S | A | -1.0459 | |
54 | E | A | -1.5587 | |
55 | D | A | -2.2039 | |
56 | E | A | -2.5989 | |
57 | A | A | -1.8992 | |
58 | K | A | -2.5629 | |
59 | K | A | -1.8572 | |
60 | I | A | 0.7747 | |
61 | G | A | -0.2078 | |
62 | I | A | 1.3758 | |
63 | P | A | -0.1626 | |
64 | N | A | -1.5953 | |
65 | A | A | -1.5683 | |
66 | K | A | -2.3828 | |
67 | D | A | -1.4504 | |
68 | P | A | -1.0956 | |
69 | R | A | -1.0175 | |
70 | F | A | 0.0000 | |
71 | T | A | -1.2469 | |
72 | I | A | 0.0000 | |
73 | S | A | -0.6553 | |
74 | R | A | -1.6339 | |
75 | D | A | -2.0885 | |
76 | N | A | -2.4823 | |
77 | S | A | -1.9957 | |
78 | K | A | -2.6525 | |
79 | N | A | -2.0390 | |
80 | T | A | 0.0000 | |
81 | L | A | 0.0000 | |
82 | Y | A | -0.8219 | |
83 | L | A | 0.0000 | |
84 | Q | A | -1.6577 | |
85 | M | A | 0.0000 | |
86 | N | A | -1.4518 | |
87 | S | A | -1.2296 | |
88 | L | A | 0.0000 | |
89 | R | A | -2.5222 | |
90 | A | A | -1.8467 | |
91 | E | A | -2.3248 | |
92 | D | A | 0.0000 | |
93 | T | A | -0.4915 | |
94 | A | A | 0.0000 | |
95 | V | A | 0.8057 | |
96 | Y | A | 0.0000 | |
97 | Y | A | 0.2839 | |
98 | C | A | 0.0000 | |
99 | A | A | 0.0000 | |
100 | D | A | 0.0000 | |
101 | A | A | -0.7939 | |
102 | T | A | -0.0174 | |
103 | L | A | 0.8751 | |
104 | L | A | -1.3351 | |
105 | D | A | -2.1395 | |
106 | T | A | -2.3516 | |
107 | E | A | -3.4495 | |
108 | E | A | -3.9605 | |
109 | Q | A | -3.4124 | |
110 | L | A | 0.0000 | |
111 | A | A | -2.5964 | |
112 | E | A | -3.7065 | |
113 | R | A | -3.1034 | |
114 | G | A | -2.0112 | |
115 | D | A | -1.7014 | |
116 | W | A | -0.5763 | |
117 | G | A | -0.4284 | |
118 | Q | A | -0.9402 | |
119 | G | A | 0.0062 | |
120 | T | A | 0.5537 | |
121 | L | A | 1.6950 | |
122 | V | A | 0.0000 | |
123 | T | A | 0.3013 | |
124 | V | A | 0.0000 | |
125 | S | A | -0.8410 | |
126 | S | A | -0.5337 |