| Chain sequence(s) |
A: NKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQERYGYQKDQAEKEVVDWETRNEYRWVKIVSRKSLGVQNVYDIGVEKDHNFLLANGLIASNEGTFTSDVSSYLEGQAAKEFIAWLVRGRG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:03)
[INFO] Main: Simulation completed successfully. (00:04:04)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | N | A | -3.3193 | |
| 2 | K | A | -3.9585 | |
| 3 | D | A | -4.5099 | |
| 4 | E | A | -4.3748 | |
| 5 | A | A | -3.0197 | |
| 6 | G | A | -3.1547 | |
| 7 | G | A | -3.1379 | |
| 8 | N | A | -2.8543 | |
| 9 | W | A | -2.3726 | |
| 10 | K | A | -3.2768 | |
| 11 | Q | A | -2.8407 | |
| 12 | F | A | 0.0000 | |
| 13 | K | A | -2.8867 | |
| 14 | G | A | -2.7284 | |
| 15 | K | A | -2.5881 | |
| 16 | V | A | 0.0000 | |
| 17 | K | A | -3.1050 | |
| 18 | E | A | -3.1601 | |
| 19 | Q | A | -2.3412 | |
| 20 | W | A | 0.0000 | |
| 21 | G | A | -2.2750 | |
| 22 | K | A | -2.6626 | |
| 23 | L | A | 0.0000 | |
| 24 | T | A | -2.2080 | |
| 25 | D | A | -2.9141 | |
| 26 | D | A | -2.4287 | |
| 27 | D | A | 0.0000 | |
| 28 | M | A | 0.0000 | |
| 29 | T | A | -1.0740 | |
| 30 | I | A | -0.3598 | |
| 31 | I | A | 0.0000 | |
| 32 | E | A | -1.6358 | |
| 33 | G | A | -1.7106 | |
| 34 | K | A | -2.4256 | |
| 35 | R | A | -2.5643 | |
| 36 | D | A | -2.8569 | |
| 37 | Q | A | -2.0851 | |
| 38 | L | A | 0.0000 | |
| 39 | V | A | 0.0000 | |
| 40 | G | A | -2.2298 | |
| 41 | K | A | -1.6670 | |
| 42 | I | A | 0.0000 | |
| 43 | Q | A | -2.4171 | |
| 44 | E | A | -2.7855 | |
| 45 | R | A | -1.9932 | |
| 46 | Y | A | -1.0954 | |
| 47 | G | A | -1.4473 | |
| 48 | Y | A | -1.8094 | |
| 49 | Q | A | -3.0232 | |
| 50 | K | A | -3.7395 | |
| 51 | D | A | -3.7766 | |
| 52 | Q | A | -2.8686 | |
| 53 | A | A | 0.0000 | |
| 54 | E | A | -3.4880 | |
| 55 | K | A | -3.4272 | |
| 56 | E | A | -2.3629 | |
| 57 | V | A | 0.0000 | |
| 58 | V | A | -1.5774 | |
| 59 | D | A | -2.7974 | |
| 60 | W | A | 0.0000 | |
| 61 | E | A | 0.0000 | |
| 62 | T | A | -2.3580 | |
| 63 | R | A | -2.8908 | |
| 64 | N | A | -2.5515 | |
| 65 | E | A | -3.0205 | |
| 66 | Y | A | -1.6697 | |
| 67 | R | A | -1.7235 | |
| 68 | W | A | -0.3647 | |
| 69 | V | A | 1.1973 | |
| 70 | K | A | 0.1741 | |
| 71 | I | A | 1.4544 | |
| 72 | V | A | 1.7111 | |
| 73 | S | A | -0.5042 | |
| 74 | R | A | -2.0103 | |
| 75 | K | A | -2.4126 | |
| 76 | S | A | -0.7948 | |
| 77 | L | A | 0.7090 | |
| 78 | G | A | 0.4111 | |
| 79 | V | A | 1.2341 | |
| 80 | Q | A | -0.1459 | |
| 81 | N | A | -0.3828 | |
| 82 | V | A | 1.3914 | |
| 83 | Y | A | 1.1116 | |
| 84 | D | A | -0.8162 | |
| 85 | I | A | -0.8374 | |
| 86 | G | A | -1.6892 | |
| 87 | V | A | -2.0673 | |
| 88 | E | A | -2.8538 | |
| 89 | K | A | -3.6285 | |
| 90 | D | A | -3.4610 | |
| 91 | H | A | -3.4495 | |
| 92 | N | A | -1.8359 | |
| 93 | F | A | 0.4962 | |
| 94 | L | A | 2.2300 | |
| 95 | L | A | 0.0000 | |
| 96 | A | A | 0.6317 | |
| 97 | N | A | -0.1518 | |
| 98 | G | A | 0.7071 | |
| 99 | L | A | 2.5511 | |
| 100 | I | A | 2.8385 | |
| 101 | A | A | 0.7815 | |
| 102 | S | A | -0.7953 | |
| 103 | N | A | -2.1438 | |
| 104 | E | A | -3.5607 | |
| 105 | G | A | -2.7921 | |
| 106 | T | A | -0.6639 | |
| 107 | F | A | 1.0043 | |
| 108 | T | A | 0.4243 | |
| 109 | S | A | -0.2510 | |
| 110 | D | A | -0.7323 | |
| 111 | V | A | 1.2398 | |
| 112 | S | A | 0.9003 | |
| 113 | S | A | 0.5288 | |
| 114 | Y | A | 1.6570 | |
| 115 | L | A | 1.7662 | |
| 116 | E | A | 0.0209 | |
| 117 | G | A | -0.5968 | |
| 118 | Q | A | -1.3554 | |
| 119 | A | A | -0.5641 | |
| 120 | A | A | -0.6833 | |
| 121 | K | A | -1.9472 | |
| 122 | E | A | -0.9544 | |
| 123 | F | A | 0.6720 | |
| 124 | I | A | 0.7531 | |
| 125 | A | A | 0.5096 | |
| 126 | W | A | 0.7655 | |
| 127 | L | A | 0.6707 | |
| 128 | V | A | 1.0636 | |
| 129 | R | A | -1.1867 | |
| 130 | G | A | -1.6303 | |
| 131 | R | A | -2.2927 | |
| 132 | G | A | -1.7074 |