| Chain sequence(s) |
A: RLCGERCVIERTRAWCRTVGCICSLHTLECVRNG
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:24)
[INFO] Main: Simulation completed successfully. (00:00:24)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -1.6569 | |
| 2 | L | A | 0.0566 | |
| 3 | C | A | -0.3556 | |
| 4 | G | A | -0.7059 | |
| 5 | E | A | 0.0000 | |
| 6 | R | A | -1.5112 | |
| 7 | C | A | 0.0000 | |
| 8 | V | A | 0.1588 | |
| 9 | I | A | 0.9377 | |
| 10 | E | A | -1.1332 | |
| 11 | R | A | -2.2181 | |
| 12 | T | A | -1.7369 | |
| 13 | R | A | -1.7375 | |
| 14 | A | A | 0.1791 | |
| 15 | W | A | 0.6059 | |
| 16 | C | A | -0.0790 | |
| 17 | R | A | -1.2738 | |
| 18 | T | A | 0.0135 | |
| 19 | V | A | 1.2299 | |
| 20 | G | A | -0.0309 | |
| 21 | C | A | 0.0405 | |
| 22 | I | A | 1.4464 | |
| 23 | C | A | 0.7173 | |
| 24 | S | A | 0.8016 | |
| 25 | L | A | 1.3748 | |
| 26 | H | A | -0.0362 | |
| 27 | T | A | 0.0613 | |
| 28 | L | A | 1.1816 | |
| 29 | E | A | -0.2152 | |
| 30 | C | A | 0.0000 | |
| 31 | V | A | -0.2764 | |
| 32 | R | A | -1.2976 | |
| 33 | N | A | -1.7583 | |
| 34 | G | A | -1.7624 |