Project name: query_structure

Status: done

Started: 2026-03-17 00:58:52
Settings
Chain sequence(s) A: RLCGERCVIERTRAWCRTVGCICSLHTLECVRNG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:24)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:24)
Show buried residues

Minimal score value
-2.2181
Maximal score value
1.4464
Average score
-0.2641
Total score value
-8.9801

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -1.6569
2 L A 0.0566
3 C A -0.3556
4 G A -0.7059
5 E A 0.0000
6 R A -1.5112
7 C A 0.0000
8 V A 0.1588
9 I A 0.9377
10 E A -1.1332
11 R A -2.2181
12 T A -1.7369
13 R A -1.7375
14 A A 0.1791
15 W A 0.6059
16 C A -0.0790
17 R A -1.2738
18 T A 0.0135
19 V A 1.2299
20 G A -0.0309
21 C A 0.0405
22 I A 1.4464
23 C A 0.7173
24 S A 0.8016
25 L A 1.3748
26 H A -0.0362
27 T A 0.0613
28 L A 1.1816
29 E A -0.2152
30 C A 0.0000
31 V A -0.2764
32 R A -1.2976
33 N A -1.7583
34 G A -1.7624
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Laboratory of Theory of Biopolymers 2018