| Chain sequence(s) |
L: CVFDTSFNEYYGFGLC
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:05)
[INFO] Main: Simulation completed successfully. (00:00:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 0 | C | L | 0.9197 | |
| 1 | V | L | 1.3523 | |
| 2 | F | L | 0.8808 | |
| 3 | D | L | -1.6253 | |
| 4 | T | L | -0.4249 | |
| 5 | S | L | 0.3350 | |
| 6 | F | L | 1.4148 | |
| 7 | N | L | -1.3054 | |
| 8 | E | L | -1.8533 | |
| 9 | Y | L | 0.8792 | |
| 10 | Y | L | 0.6581 | |
| 11 | G | L | 0.5541 | |
| 12 | F | L | 1.8051 | |
| 13 | G | L | 0.2698 | |
| 14 | L | L | 1.5863 | |
| 15 | C | L | 1.0121 |