| Chain sequence(s) |
A: RWSFRWSFRWSFRWSF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:13)
[INFO] Main: Simulation completed successfully. (00:00:14)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -0.3815 | |
| 2 | W | A | 1.0153 | |
| 3 | S | A | 0.4608 | |
| 4 | F | A | 0.1403 | |
| 5 | R | A | -0.8231 | |
| 6 | W | A | 0.6950 | |
| 7 | S | A | 1.0358 | |
| 8 | F | A | 1.6497 | |
| 9 | R | A | -0.2069 | |
| 10 | W | A | 0.9916 | |
| 11 | S | A | 0.6951 | |
| 12 | F | A | 0.7600 | |
| 13 | R | A | -0.5280 | |
| 14 | W | A | 0.9492 | |
| 15 | S | A | 1.0912 | |
| 16 | F | A | 1.7681 |