| Chain sequence(s) |
A: RADARADARADARADA
C: RADARADARADARADA B: RADARADARADARADA D: RADARADARADARADA input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:39)
[INFO] Main: Simulation completed successfully. (00:01:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.9638 | |
| 2 | A | A | -2.1838 | |
| 3 | D | A | -3.1739 | |
| 4 | A | A | -2.9059 | |
| 5 | R | A | -3.0872 | |
| 6 | A | A | -2.8680 | |
| 7 | D | A | -3.3061 | |
| 8 | A | A | -2.8862 | |
| 9 | R | A | -3.3745 | |
| 10 | A | A | -2.9468 | |
| 11 | D | A | -3.5498 | |
| 12 | A | A | -3.1776 | |
| 13 | R | A | -3.2522 | |
| 14 | A | A | -2.4328 | |
| 15 | D | A | -2.9597 | |
| 16 | A | A | -1.6205 | |
| 1 | R | B | -4.2666 | |
| 2 | A | B | -2.6886 | |
| 3 | D | B | -3.0851 | |
| 4 | A | B | -3.0567 | |
| 5 | R | B | -2.7203 | |
| 6 | A | B | -1.7754 | |
| 7 | D | B | -2.1770 | |
| 8 | A | B | -1.9155 | |
| 9 | R | B | -1.9913 | |
| 10 | A | B | -1.4991 | |
| 11 | D | B | -1.9059 | |
| 12 | A | B | -2.1101 | |
| 13 | R | B | -2.0263 | |
| 14 | A | B | -1.3557 | |
| 15 | D | B | 0.0000 | |
| 16 | A | B | -1.0874 | |
| 1 | R | C | -2.8500 | |
| 2 | A | C | -2.2292 | |
| 3 | D | C | -2.9806 | |
| 4 | A | C | -2.6687 | |
| 5 | R | C | -3.0767 | |
| 6 | A | C | -2.3167 | |
| 7 | D | C | -2.2829 | |
| 8 | A | C | -2.1538 | |
| 9 | R | C | -2.3799 | |
| 10 | A | C | -1.7185 | |
| 11 | D | C | -1.7432 | |
| 12 | A | C | -1.8949 | |
| 13 | R | C | -2.3675 | |
| 14 | A | C | -1.3142 | |
| 15 | D | C | -1.5656 | |
| 16 | A | C | -1.1421 | |
| 1 | R | D | -4.3460 | |
| 2 | A | D | -3.0507 | |
| 3 | D | D | -3.3889 | |
| 4 | A | D | -3.4701 | |
| 5 | R | D | -3.6743 | |
| 6 | A | D | -2.3649 | |
| 7 | D | D | -2.4727 | |
| 8 | A | D | -2.3967 | |
| 9 | R | D | -2.3407 | |
| 10 | A | D | -2.0140 | |
| 11 | D | D | -2.2883 | |
| 12 | A | D | -2.1030 | |
| 13 | R | D | -2.7562 | |
| 14 | A | D | -1.9977 | |
| 15 | D | D | -2.4575 | |
| 16 | A | D | -1.4333 |