Project name: FEFEFEGSKGH20

Status: done

Started: 2026-02-10 05:07:09
Settings
Chain sequence(s) A: FEFEFEGSKGH
C: FEFEFEGSKGH
B: FEFEFEGSKGH
E: FEFEFEGSKGH
D: FEFEFEGSKGH
G: FEFEFEGSKGH
F: FEFEFEGSKGH
I: FEFEFEGSKGH
H: FEFEFEGSKGH
K: FEFEFEGSKGH
J: FEFEFEGSKGH
M: FEFEFEGSKGH
L: FEFEFEGSKGH
O: FEFEFEGSKGH
N: FEFEFEGSKGH
Q: FEFEFEGSKGH
P: FEFEFEGSKGH
S: FEFEFEGSKGH
R: FEFEFEGSKGH
T: FEFEFEGSKGH
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:18:22)
[INFO]       Main:     Simulation completed successfully.                                          (00:18:28)
Show buried residues

Minimal score value
-3.774
Maximal score value
1.312
Average score
-1.5298
Total score value
-336.5535

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A -0.7615
2 E A -2.5732
3 F A 0.0000
4 E A -2.7152
5 F A 0.0000
6 E A -1.7267
7 G A -1.3355
8 S A -1.7798
9 K A -2.3089
10 G A -2.2610
11 H A -2.2112
1 F B -0.7033
2 E B -2.6007
3 F B 0.0000
4 E B -2.9683
5 F B 0.0000
6 E B -1.6790
7 G B -1.0596
8 S B -1.5116
9 K B -2.0278
10 G B -2.0125
11 H B -2.0997
1 F C -0.3587
2 E C -1.9223
3 F C 0.0000
4 E C -2.7339
5 F C -1.6861
6 E C -1.6242
7 G C -1.0057
8 S C -1.3829
9 K C -1.9536
10 G C -1.9669
11 H C -2.1060
1 F D -0.0526
2 E D -1.5627
3 F D 0.0000
4 E D -2.5083
5 F D -1.6459
6 E D -1.5228
7 G D -0.9146
8 S D -1.2811
9 K D -1.8670
10 G D -1.8375
11 H D -2.0266
1 F E 0.0742
2 E E -1.3980
3 F E 0.0000
4 E E -2.6488
5 F E -1.9741
6 E E -1.9145
7 G E -1.2397
8 S E -1.5220
9 K E -1.7991
10 G E -1.8295
11 H E -2.0648
1 F F 0.5000
2 E F -1.6217
3 F F 0.0000
4 E F -3.4213
5 F F 0.0000
6 E F -2.6697
7 G F -1.6605
8 S F -2.0549
9 K F -2.4527
10 G F -2.1804
11 H F -2.2022
1 F G 1.0404
2 E G -1.5025
3 F G -1.3294
4 E G -2.9944
5 F G -2.1198
6 E G -3.0295
7 G G -1.8288
8 S G -1.9260
9 K G -2.4713
10 G G -1.9965
11 H G -1.7619
1 F H 0.3571
2 E H -1.6103
3 F H -1.4827
4 E H -2.3478
5 F H -0.8156
6 E H -2.5099
7 G H -2.2105
8 S H -2.8151
9 K H -3.4131
10 G H -2.4624
11 H H -2.2113
1 F I -0.0193
2 E I -2.1914
3 F I 0.0000
4 E I -2.9372
5 F I 0.0000
6 E I -2.6081
7 G I -2.0368
8 S I -2.5718
9 K I -3.2430
10 G I -2.5997
11 H I -2.4377
1 F J 0.0041
2 E J -1.9904
3 F J 0.0000
4 E J -3.0550
5 F J 0.0000
6 E J -2.0230
7 G J 0.0000
8 S J -1.8870
9 K J -2.4863
10 G J -2.2562
11 H J -2.2490
1 F K 0.2773
2 E K -2.0328
3 F K 0.0000
4 E K -3.0401
5 F K 0.0000
6 E K -1.7738
7 G K 0.0000
8 S K -1.4461
9 K K -2.1468
10 G K -2.0968
11 H K -2.1636
1 F L 0.5377
2 E L -1.6056
3 F L 0.0000
4 E L -3.0126
5 F L 0.0000
6 E L -1.5734
7 G L -1.0243
8 S L -1.2574
9 K L -1.9000
10 G L -1.9545
11 H L -2.1224
1 F M 0.3851
2 E M -1.4673
3 F M 0.0000
4 E M -2.7342
5 F M 0.0000
6 E M -1.3137
7 G M 0.0000
8 S M -1.1053
9 K M -1.7222
10 G M -1.8090
11 H M -2.0675
1 F N 0.2591
2 E N -1.5076
3 F N 0.0000
4 E N -2.3760
5 F N 0.0000
6 E N -1.2536
7 G N 0.0000
8 S N -1.0853
9 K N -1.7012
10 G N -1.7461
11 H N -1.9744
1 F O 0.2959
2 E O -1.6278
3 F O 0.0000
4 E O -2.7024
5 F O 0.0000
6 E O -1.6103
7 G O -1.1805
8 S O -1.4726
9 K O -1.6636
10 G O -1.9105
11 H O -2.0827
1 F P 0.8054
2 E P -1.7025
3 F P 0.0000
4 E P -3.3845
5 F P 0.0000
6 E P -2.4282
7 G P 0.0000
8 S P -2.0503
9 K P -2.6415
10 G P -2.3947
11 H P -2.3127
1 F Q 1.2613
2 E Q -1.5620
3 F Q -1.4462
4 E Q -3.2407
5 F Q -1.9504
6 E Q -2.9877
7 G Q -2.0994
8 S Q -1.9394
9 K Q -2.6028
10 G Q -2.1707
11 H Q -1.7781
1 F R 1.3120
2 E R -0.6287
3 F R 0.2369
4 E R -1.4860
5 F R -0.4385
6 E R -2.2405
7 G R -2.0959
8 S R -2.7916
9 K R -3.3876
10 G R -2.6291
11 H R -2.2296
1 F S 0.3784
2 E S -1.2470
3 F S 0.0000
4 E S -2.4383
5 F S -1.2525
6 E S -2.3281
7 G S -2.0153
8 S S -2.6263
9 K S -3.7740
10 G S -2.8749
11 H S -2.4955
1 F T -0.0857
2 E T -2.0609
3 F T 0.0000
4 E T -2.9000
5 F T 0.0000
6 E T -1.9260
7 G T -1.6214
8 S T -2.3728
9 K T -3.0611
10 G T -2.7456
11 H T -2.1902
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Laboratory of Theory of Biopolymers 2018