| Chain sequence(s) |
A: FEFEFEGSKGH
C: FEFEFEGSKGH B: FEFEFEGSKGH E: FEFEFEGSKGH D: FEFEFEGSKGH G: FEFEFEGSKGH F: FEFEFEGSKGH I: FEFEFEGSKGH H: FEFEFEGSKGH K: FEFEFEGSKGH J: FEFEFEGSKGH M: FEFEFEGSKGH L: FEFEFEGSKGH O: FEFEFEGSKGH N: FEFEFEGSKGH Q: FEFEFEGSKGH P: FEFEFEGSKGH S: FEFEFEGSKGH R: FEFEFEGSKGH T: FEFEFEGSKGH input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:18:22)
[INFO] Main: Simulation completed successfully. (00:18:28)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | -0.7615 | |
| 2 | E | A | -2.5732 | |
| 3 | F | A | 0.0000 | |
| 4 | E | A | -2.7152 | |
| 5 | F | A | 0.0000 | |
| 6 | E | A | -1.7267 | |
| 7 | G | A | -1.3355 | |
| 8 | S | A | -1.7798 | |
| 9 | K | A | -2.3089 | |
| 10 | G | A | -2.2610 | |
| 11 | H | A | -2.2112 | |
| 1 | F | B | -0.7033 | |
| 2 | E | B | -2.6007 | |
| 3 | F | B | 0.0000 | |
| 4 | E | B | -2.9683 | |
| 5 | F | B | 0.0000 | |
| 6 | E | B | -1.6790 | |
| 7 | G | B | -1.0596 | |
| 8 | S | B | -1.5116 | |
| 9 | K | B | -2.0278 | |
| 10 | G | B | -2.0125 | |
| 11 | H | B | -2.0997 | |
| 1 | F | C | -0.3587 | |
| 2 | E | C | -1.9223 | |
| 3 | F | C | 0.0000 | |
| 4 | E | C | -2.7339 | |
| 5 | F | C | -1.6861 | |
| 6 | E | C | -1.6242 | |
| 7 | G | C | -1.0057 | |
| 8 | S | C | -1.3829 | |
| 9 | K | C | -1.9536 | |
| 10 | G | C | -1.9669 | |
| 11 | H | C | -2.1060 | |
| 1 | F | D | -0.0526 | |
| 2 | E | D | -1.5627 | |
| 3 | F | D | 0.0000 | |
| 4 | E | D | -2.5083 | |
| 5 | F | D | -1.6459 | |
| 6 | E | D | -1.5228 | |
| 7 | G | D | -0.9146 | |
| 8 | S | D | -1.2811 | |
| 9 | K | D | -1.8670 | |
| 10 | G | D | -1.8375 | |
| 11 | H | D | -2.0266 | |
| 1 | F | E | 0.0742 | |
| 2 | E | E | -1.3980 | |
| 3 | F | E | 0.0000 | |
| 4 | E | E | -2.6488 | |
| 5 | F | E | -1.9741 | |
| 6 | E | E | -1.9145 | |
| 7 | G | E | -1.2397 | |
| 8 | S | E | -1.5220 | |
| 9 | K | E | -1.7991 | |
| 10 | G | E | -1.8295 | |
| 11 | H | E | -2.0648 | |
| 1 | F | F | 0.5000 | |
| 2 | E | F | -1.6217 | |
| 3 | F | F | 0.0000 | |
| 4 | E | F | -3.4213 | |
| 5 | F | F | 0.0000 | |
| 6 | E | F | -2.6697 | |
| 7 | G | F | -1.6605 | |
| 8 | S | F | -2.0549 | |
| 9 | K | F | -2.4527 | |
| 10 | G | F | -2.1804 | |
| 11 | H | F | -2.2022 | |
| 1 | F | G | 1.0404 | |
| 2 | E | G | -1.5025 | |
| 3 | F | G | -1.3294 | |
| 4 | E | G | -2.9944 | |
| 5 | F | G | -2.1198 | |
| 6 | E | G | -3.0295 | |
| 7 | G | G | -1.8288 | |
| 8 | S | G | -1.9260 | |
| 9 | K | G | -2.4713 | |
| 10 | G | G | -1.9965 | |
| 11 | H | G | -1.7619 | |
| 1 | F | H | 0.3571 | |
| 2 | E | H | -1.6103 | |
| 3 | F | H | -1.4827 | |
| 4 | E | H | -2.3478 | |
| 5 | F | H | -0.8156 | |
| 6 | E | H | -2.5099 | |
| 7 | G | H | -2.2105 | |
| 8 | S | H | -2.8151 | |
| 9 | K | H | -3.4131 | |
| 10 | G | H | -2.4624 | |
| 11 | H | H | -2.2113 | |
| 1 | F | I | -0.0193 | |
| 2 | E | I | -2.1914 | |
| 3 | F | I | 0.0000 | |
| 4 | E | I | -2.9372 | |
| 5 | F | I | 0.0000 | |
| 6 | E | I | -2.6081 | |
| 7 | G | I | -2.0368 | |
| 8 | S | I | -2.5718 | |
| 9 | K | I | -3.2430 | |
| 10 | G | I | -2.5997 | |
| 11 | H | I | -2.4377 | |
| 1 | F | J | 0.0041 | |
| 2 | E | J | -1.9904 | |
| 3 | F | J | 0.0000 | |
| 4 | E | J | -3.0550 | |
| 5 | F | J | 0.0000 | |
| 6 | E | J | -2.0230 | |
| 7 | G | J | 0.0000 | |
| 8 | S | J | -1.8870 | |
| 9 | K | J | -2.4863 | |
| 10 | G | J | -2.2562 | |
| 11 | H | J | -2.2490 | |
| 1 | F | K | 0.2773 | |
| 2 | E | K | -2.0328 | |
| 3 | F | K | 0.0000 | |
| 4 | E | K | -3.0401 | |
| 5 | F | K | 0.0000 | |
| 6 | E | K | -1.7738 | |
| 7 | G | K | 0.0000 | |
| 8 | S | K | -1.4461 | |
| 9 | K | K | -2.1468 | |
| 10 | G | K | -2.0968 | |
| 11 | H | K | -2.1636 | |
| 1 | F | L | 0.5377 | |
| 2 | E | L | -1.6056 | |
| 3 | F | L | 0.0000 | |
| 4 | E | L | -3.0126 | |
| 5 | F | L | 0.0000 | |
| 6 | E | L | -1.5734 | |
| 7 | G | L | -1.0243 | |
| 8 | S | L | -1.2574 | |
| 9 | K | L | -1.9000 | |
| 10 | G | L | -1.9545 | |
| 11 | H | L | -2.1224 | |
| 1 | F | M | 0.3851 | |
| 2 | E | M | -1.4673 | |
| 3 | F | M | 0.0000 | |
| 4 | E | M | -2.7342 | |
| 5 | F | M | 0.0000 | |
| 6 | E | M | -1.3137 | |
| 7 | G | M | 0.0000 | |
| 8 | S | M | -1.1053 | |
| 9 | K | M | -1.7222 | |
| 10 | G | M | -1.8090 | |
| 11 | H | M | -2.0675 | |
| 1 | F | N | 0.2591 | |
| 2 | E | N | -1.5076 | |
| 3 | F | N | 0.0000 | |
| 4 | E | N | -2.3760 | |
| 5 | F | N | 0.0000 | |
| 6 | E | N | -1.2536 | |
| 7 | G | N | 0.0000 | |
| 8 | S | N | -1.0853 | |
| 9 | K | N | -1.7012 | |
| 10 | G | N | -1.7461 | |
| 11 | H | N | -1.9744 | |
| 1 | F | O | 0.2959 | |
| 2 | E | O | -1.6278 | |
| 3 | F | O | 0.0000 | |
| 4 | E | O | -2.7024 | |
| 5 | F | O | 0.0000 | |
| 6 | E | O | -1.6103 | |
| 7 | G | O | -1.1805 | |
| 8 | S | O | -1.4726 | |
| 9 | K | O | -1.6636 | |
| 10 | G | O | -1.9105 | |
| 11 | H | O | -2.0827 | |
| 1 | F | P | 0.8054 | |
| 2 | E | P | -1.7025 | |
| 3 | F | P | 0.0000 | |
| 4 | E | P | -3.3845 | |
| 5 | F | P | 0.0000 | |
| 6 | E | P | -2.4282 | |
| 7 | G | P | 0.0000 | |
| 8 | S | P | -2.0503 | |
| 9 | K | P | -2.6415 | |
| 10 | G | P | -2.3947 | |
| 11 | H | P | -2.3127 | |
| 1 | F | Q | 1.2613 | |
| 2 | E | Q | -1.5620 | |
| 3 | F | Q | -1.4462 | |
| 4 | E | Q | -3.2407 | |
| 5 | F | Q | -1.9504 | |
| 6 | E | Q | -2.9877 | |
| 7 | G | Q | -2.0994 | |
| 8 | S | Q | -1.9394 | |
| 9 | K | Q | -2.6028 | |
| 10 | G | Q | -2.1707 | |
| 11 | H | Q | -1.7781 | |
| 1 | F | R | 1.3120 | |
| 2 | E | R | -0.6287 | |
| 3 | F | R | 0.2369 | |
| 4 | E | R | -1.4860 | |
| 5 | F | R | -0.4385 | |
| 6 | E | R | -2.2405 | |
| 7 | G | R | -2.0959 | |
| 8 | S | R | -2.7916 | |
| 9 | K | R | -3.3876 | |
| 10 | G | R | -2.6291 | |
| 11 | H | R | -2.2296 | |
| 1 | F | S | 0.3784 | |
| 2 | E | S | -1.2470 | |
| 3 | F | S | 0.0000 | |
| 4 | E | S | -2.4383 | |
| 5 | F | S | -1.2525 | |
| 6 | E | S | -2.3281 | |
| 7 | G | S | -2.0153 | |
| 8 | S | S | -2.6263 | |
| 9 | K | S | -3.7740 | |
| 10 | G | S | -2.8749 | |
| 11 | H | S | -2.4955 | |
| 1 | F | T | -0.0857 | |
| 2 | E | T | -2.0609 | |
| 3 | F | T | 0.0000 | |
| 4 | E | T | -2.9000 | |
| 5 | F | T | 0.0000 | |
| 6 | E | T | -1.9260 | |
| 7 | G | T | -1.6214 | |
| 8 | S | T | -2.3728 | |
| 9 | K | T | -3.0611 | |
| 10 | G | T | -2.7456 | |
| 11 | H | T | -2.1902 |