| Chain sequence(s) |
A: MALARSKLVSKLISSSITHPVMLSTTFKTNTRSFSSSASKTLDNTSPHNKIRYNYSSECEQLVNEQINHELNASYFYTALGTYYSQPTVALPGVANYFLAQSNEERRHAHALIQYQNGRGGKVQFSAIQAPPDFSKVLTGGEASSAAAAPQNMKNSSCDTVGCTNNIATVTTRGFELAIETERMVYDKIRYIYQVAESQRDFALTGFLQKLIDEQVESLRELQELYTKSKRMVNEYWFDQYLVNSSVASSVESGATEFKSGSAQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:08:32)
[INFO] Main: Simulation completed successfully. (00:08:36)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.0638 | |
| 2 | A | A | 0.5188 | |
| 3 | L | A | 1.5685 | |
| 4 | A | A | 0.0072 | |
| 5 | R | A | -1.8719 | |
| 6 | S | A | -0.8481 | |
| 7 | K | A | -1.4964 | |
| 8 | L | A | 1.1825 | |
| 9 | V | A | 1.0510 | |
| 10 | S | A | -0.3626 | |
| 11 | K | A | -1.4730 | |
| 12 | L | A | 1.5313 | |
| 13 | I | A | 2.2382 | |
| 14 | S | A | 0.1096 | |
| 15 | S | A | -0.2888 | |
| 16 | S | A | 0.1099 | |
| 17 | I | A | 1.9613 | |
| 18 | T | A | 0.1146 | |
| 19 | H | A | -1.0505 | |
| 20 | P | A | -0.1040 | |
| 21 | V | A | 1.9205 | |
| 22 | M | A | 1.6780 | |
| 23 | L | A | 1.7093 | |
| 24 | S | A | 0.0595 | |
| 25 | T | A | -0.1242 | |
| 26 | T | A | 0.2800 | |
| 27 | F | A | 1.6148 | |
| 28 | K | A | -1.3558 | |
| 29 | T | A | -0.6230 | |
| 30 | N | A | -1.2990 | |
| 31 | T | A | -0.6460 | |
| 32 | R | A | -1.8971 | |
| 33 | S | A | -0.1989 | |
| 34 | F | A | 1.8622 | |
| 35 | S | A | 0.1078 | |
| 36 | S | A | -0.2918 | |
| 37 | S | A | -0.2416 | |
| 38 | A | A | -0.0208 | |
| 39 | S | A | -0.5148 | |
| 40 | K | A | -1.7525 | |
| 41 | T | A | -0.1024 | |
| 42 | L | A | 1.2030 | |
| 43 | D | A | -1.7324 | |
| 44 | N | A | -1.6085 | |
| 45 | T | A | -0.3175 | |
| 46 | S | A | -0.1720 | |
| 47 | P | A | -0.4557 | |
| 48 | H | A | -1.2242 | |
| 49 | N | A | -1.5133 | |
| 50 | K | A | -1.6599 | |
| 51 | I | A | 0.8445 | |
| 52 | R | A | -0.1391 | |
| 53 | Y | A | 0.9726 | |
| 54 | N | A | -1.0342 | |
| 55 | Y | A | 0.0000 | |
| 56 | S | A | -0.1155 | |
| 57 | S | A | -0.5777 | |
| 58 | E | A | -1.8584 | |
| 59 | C | A | 0.0000 | |
| 60 | E | A | -0.4471 | |
| 61 | Q | A | -1.2089 | |
| 62 | L | A | -0.1498 | |
| 63 | V | A | 0.0000 | |
| 64 | N | A | 0.0000 | |
| 65 | E | A | -0.7879 | |
| 66 | Q | A | 0.0000 | |
| 67 | I | A | 0.0000 | |
| 68 | N | A | -0.1906 | |
| 69 | H | A | -0.2455 | |
| 70 | E | A | 0.0000 | |
| 71 | L | A | 0.1725 | |
| 72 | N | A | -0.2940 | |
| 73 | A | A | 0.0000 | |
| 74 | S | A | 0.0000 | |
| 75 | Y | A | 0.9299 | |
| 76 | F | A | 0.0000 | |
| 77 | Y | A | 0.0000 | |
| 78 | T | A | 0.0704 | |
| 79 | A | A | 0.0005 | |
| 80 | L | A | 0.0000 | |
| 81 | G | A | 0.0000 | |
| 82 | T | A | -0.0801 | |
| 83 | Y | A | 0.0000 | |
| 84 | Y | A | 0.0000 | |
| 85 | S | A | -0.3046 | |
| 86 | Q | A | -0.6467 | |
| 87 | P | A | -0.3683 | |
| 88 | T | A | -0.0716 | |
| 89 | V | A | 0.2497 | |
| 90 | A | A | 0.0920 | |
| 91 | L | A | 0.0000 | |
| 92 | P | A | -0.2471 | |
| 93 | G | A | 0.0000 | |
| 94 | V | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | N | A | -1.2467 | |
| 97 | Y | A | -0.0854 | |
| 98 | F | A | 0.0000 | |
| 99 | L | A | 0.6054 | |
| 100 | A | A | 0.1157 | |
| 101 | Q | A | -0.2423 | |
| 102 | S | A | 0.0000 | |
| 103 | N | A | -1.4655 | |
| 104 | E | A | -1.3130 | |
| 105 | E | A | 0.0000 | |
| 106 | R | A | -1.0196 | |
| 107 | R | A | -1.9867 | |
| 108 | H | A | -0.4383 | |
| 109 | A | A | 0.0000 | |
| 110 | H | A | -0.9452 | |
| 111 | A | A | -0.1587 | |
| 112 | L | A | 0.0000 | |
| 113 | I | A | 0.0851 | |
| 114 | Q | A | -1.0956 | |
| 115 | Y | A | -0.1052 | |
| 116 | Q | A | 0.0000 | |
| 117 | N | A | -1.1668 | |
| 118 | G | A | -0.6811 | |
| 119 | R | A | -0.2893 | |
| 120 | G | A | 0.0000 | |
| 121 | G | A | 0.0000 | |
| 122 | K | A | -1.6044 | |
| 123 | V | A | -0.0101 | |
| 124 | Q | A | -0.7454 | |
| 125 | F | A | 1.6813 | |
| 126 | S | A | 0.1536 | |
| 127 | A | A | 0.1537 | |
| 128 | I | A | 0.5311 | |
| 129 | Q | A | -1.0519 | |
| 130 | A | A | -0.1709 | |
| 131 | P | A | -0.0660 | |
| 132 | P | A | -0.4885 | |
| 133 | D | A | -1.8172 | |
| 134 | F | A | 0.0000 | |
| 135 | S | A | -0.4629 | |
| 136 | K | A | -1.6075 | |
| 137 | V | A | 0.4533 | |
| 138 | L | A | 0.0000 | |
| 139 | T | A | -0.1550 | |
| 140 | G | A | -0.5074 | |
| 141 | G | A | -0.7611 | |
| 142 | E | A | -1.8373 | |
| 143 | A | A | -0.3175 | |
| 144 | S | A | -0.2412 | |
| 145 | S | A | -0.2413 | |
| 146 | A | A | 0.0305 | |
| 147 | A | A | 0.0801 | |
| 148 | A | A | 0.0797 | |
| 149 | A | A | 0.0233 | |
| 150 | P | A | -0.4632 | |
| 151 | Q | A | -1.4814 | |
| 152 | N | A | -1.2968 | |
| 153 | M | A | 0.4943 | |
| 154 | K | A | -1.7385 | |
| 155 | N | A | -1.6278 | |
| 156 | S | A | -0.4888 | |
| 157 | S | A | -0.1138 | |
| 158 | C | A | 0.3447 | |
| 159 | D | A | -1.6606 | |
| 160 | T | A | -0.0658 | |
| 161 | V | A | 1.6802 | |
| 162 | G | A | 0.0344 | |
| 163 | C | A | 0.6391 | |
| 164 | T | A | -0.1721 | |
| 165 | N | A | -1.5199 | |
| 166 | N | A | -1.1428 | |
| 167 | I | A | 1.7871 | |
| 168 | A | A | 0.3910 | |
| 169 | T | A | 0.0346 | |
| 170 | V | A | 0.3016 | |
| 171 | T | A | 0.0000 | |
| 172 | T | A | 0.0000 | |
| 173 | R | A | -0.7818 | |
| 174 | G | A | 0.0000 | |
| 175 | F | A | 0.0000 | |
| 176 | E | A | -1.1503 | |
| 177 | L | A | 0.1407 | |
| 178 | A | A | 0.0000 | |
| 179 | I | A | -0.0360 | |
| 180 | E | A | -1.7685 | |
| 181 | T | A | -0.3343 | |
| 182 | E | A | 0.0000 | |
| 183 | R | A | -1.5164 | |
| 184 | M | A | 0.2224 | |
| 185 | V | A | 0.0000 | |
| 186 | Y | A | -0.1950 | |
| 187 | D | A | -1.8768 | |
| 188 | K | A | -0.9343 | |
| 189 | I | A | 0.0000 | |
| 190 | R | A | -0.9394 | |
| 191 | Y | A | 1.0953 | |
| 192 | I | A | 0.0000 | |
| 193 | Y | A | -0.1070 | |
| 194 | Q | A | -1.0591 | |
| 195 | V | A | -0.0215 | |
| 196 | A | A | 0.0000 | |
| 197 | E | A | -1.2009 | |
| 198 | S | A | -0.5745 | |
| 199 | Q | A | -1.5600 | |
| 200 | R | A | -2.1620 | |
| 201 | D | A | 0.0000 | |
| 202 | F | A | 1.9509 | |
| 203 | A | A | 0.4080 | |
| 204 | L | A | 0.0000 | |
| 205 | T | A | 0.0000 | |
| 206 | G | A | -0.1255 | |
| 207 | F | A | 0.2934 | |
| 208 | L | A | 0.0000 | |
| 209 | Q | A | -0.8070 | |
| 210 | K | A | -1.7941 | |
| 211 | L | A | 0.0000 | |
| 212 | I | A | -0.1632 | |
| 213 | D | A | -2.0175 | |
| 214 | E | A | -1.8128 | |
| 215 | Q | A | 0.0000 | |
| 216 | V | A | 1.0474 | |
| 217 | E | A | -1.5036 | |
| 218 | S | A | -0.3219 | |
| 219 | L | A | 0.0000 | |
| 220 | R | A | -2.0278 | |
| 221 | E | A | -1.1277 | |
| 222 | L | A | 0.0000 | |
| 223 | Q | A | -1.0765 | |
| 224 | E | A | -1.1665 | |
| 225 | L | A | 0.0000 | |
| 226 | Y | A | 0.1705 | |
| 227 | T | A | -0.0616 | |
| 228 | K | A | -0.4094 | |
| 229 | S | A | 0.0000 | |
| 230 | K | A | -1.9372 | |
| 231 | R | A | -2.1034 | |
| 232 | M | A | 0.1488 | |
| 233 | V | A | 1.6056 | |
| 234 | N | A | -0.8224 | |
| 235 | E | A | -0.2987 | |
| 236 | Y | A | 1.4683 | |
| 237 | W | A | 1.4240 | |
| 238 | F | A | 0.0000 | |
| 239 | D | A | 0.0000 | |
| 240 | Q | A | -0.7370 | |
| 241 | Y | A | 0.2731 | |
| 242 | L | A | 0.0000 | |
| 243 | V | A | 0.3781 | |
| 244 | N | A | -1.1645 | |
| 245 | S | A | -0.3599 | |
| 246 | S | A | 0.1109 | |
| 247 | V | A | 1.6847 | |
| 248 | A | A | 0.3152 | |
| 249 | S | A | -0.2431 | |
| 250 | S | A | 0.0666 | |
| 251 | V | A | 1.4087 | |
| 252 | E | A | -1.5360 | |
| 253 | S | A | -0.5301 | |
| 254 | G | A | -0.1238 | |
| 255 | A | A | -0.0078 | |
| 256 | T | A | -0.3914 | |
| 257 | E | A | -1.4838 | |
| 258 | F | A | 1.3117 | |
| 259 | K | A | -1.3929 | |
| 260 | S | A | -0.6010 | |
| 261 | G | A | -0.5423 | |
| 262 | S | A | -0.2857 | |
| 263 | A | A | -0.1947 | |
| 264 | Q | A | -1.1878 |