| Chain sequence(s) |
A: MSHHHHHHSGMPSISELVKPENQTLEGFKLLVKKAKELAKELEEMVKTGSYTDNEKYYELEYEAYRVLRLVYKGDFLKIVEEYAAGVATGSLSEEEREETMEAIAGFIEAVYRIYDSLYKIYMYRGMFYPHPYEVFYKFEKVFLEALTIIIAVDPEGAKKFVEALKKIHEEVYGDSSYVDKLIAEAEARAPAVAARLPELVARVANS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:03)
[INFO] Main: Simulation completed successfully. (00:10:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.5625 | |
| 2 | S | A | -0.6058 | |
| 3 | H | A | -1.7278 | |
| 4 | H | A | -2.3280 | |
| 5 | H | A | -2.7128 | |
| 6 | H | A | -2.7417 | |
| 7 | H | A | -2.5336 | |
| 8 | H | A | -2.1065 | |
| 9 | S | A | -1.2447 | |
| 10 | G | A | -0.7899 | |
| 11 | M | A | -0.1223 | |
| 12 | P | A | -0.3097 | |
| 13 | S | A | -0.4981 | |
| 14 | I | A | 0.0000 | |
| 15 | S | A | -0.9297 | |
| 16 | E | A | -1.9439 | |
| 17 | L | A | 0.0000 | |
| 18 | V | A | -1.5951 | |
| 19 | K | A | -2.3080 | |
| 20 | P | A | -2.0884 | |
| 21 | E | A | -2.7408 | |
| 22 | N | A | -2.3461 | |
| 23 | Q | A | -1.8624 | |
| 24 | T | A | -1.3856 | |
| 25 | L | A | -1.4324 | |
| 26 | E | A | -2.2676 | |
| 27 | G | A | -1.5477 | |
| 28 | F | A | 0.0000 | |
| 29 | K | A | -1.6850 | |
| 30 | L | A | -0.6027 | |
| 31 | L | A | 0.0000 | |
| 32 | V | A | 0.0000 | |
| 33 | K | A | -2.3312 | |
| 34 | K | A | -2.1241 | |
| 35 | A | A | 0.0000 | |
| 36 | K | A | -3.6635 | |
| 37 | E | A | -3.9153 | |
| 38 | L | A | 0.0000 | |
| 39 | A | A | 0.0000 | |
| 40 | K | A | -4.2805 | |
| 41 | E | A | -3.9626 | |
| 42 | L | A | 0.0000 | |
| 43 | E | A | -3.4834 | |
| 44 | E | A | -3.3415 | |
| 45 | M | A | 0.0000 | |
| 46 | V | A | -1.7645 | |
| 47 | K | A | -2.5154 | |
| 48 | T | A | -1.3630 | |
| 49 | G | A | -0.9257 | |
| 50 | S | A | -1.2783 | |
| 51 | Y | A | -1.1833 | |
| 52 | T | A | -1.3808 | |
| 53 | D | A | -2.7239 | |
| 54 | N | A | -2.9883 | |
| 55 | E | A | -3.3552 | |
| 56 | K | A | -2.8635 | |
| 57 | Y | A | 0.0000 | |
| 58 | Y | A | -0.8881 | |
| 59 | E | A | -1.9395 | |
| 60 | L | A | -1.0576 | |
| 61 | E | A | -0.0818 | |
| 62 | Y | A | 0.4852 | |
| 63 | E | A | -0.3296 | |
| 64 | A | A | 0.0000 | |
| 65 | Y | A | -0.1098 | |
| 66 | R | A | -0.5562 | |
| 67 | V | A | 0.0000 | |
| 68 | L | A | 0.0000 | |
| 69 | R | A | -1.4996 | |
| 70 | L | A | 0.0000 | |
| 71 | V | A | 0.0000 | |
| 72 | Y | A | -0.9588 | |
| 73 | K | A | -2.0986 | |
| 74 | G | A | -1.2933 | |
| 75 | D | A | -1.3504 | |
| 76 | F | A | 0.0000 | |
| 77 | L | A | -0.7157 | |
| 78 | K | A | -1.2760 | |
| 79 | I | A | 0.0000 | |
| 80 | V | A | 0.0000 | |
| 81 | E | A | -0.8095 | |
| 82 | E | A | -1.0458 | |
| 83 | Y | A | 0.0000 | |
| 84 | A | A | 0.0000 | |
| 85 | A | A | 0.0000 | |
| 86 | G | A | -0.5796 | |
| 87 | V | A | 0.0000 | |
| 88 | A | A | -0.1438 | |
| 89 | T | A | -0.2461 | |
| 90 | G | A | -0.8239 | |
| 91 | S | A | -0.8063 | |
| 92 | L | A | -1.6222 | |
| 93 | S | A | -2.6744 | |
| 94 | E | A | -4.0982 | |
| 95 | E | A | -4.6573 | |
| 96 | E | A | -4.7053 | |
| 97 | R | A | -4.1586 | |
| 98 | E | A | -5.2266 | |
| 99 | E | A | -4.9590 | |
| 100 | T | A | 0.0000 | |
| 101 | M | A | 0.0000 | |
| 102 | E | A | -3.3789 | |
| 103 | A | A | 0.0000 | |
| 104 | I | A | 0.0000 | |
| 105 | A | A | 0.0000 | |
| 106 | G | A | 0.0000 | |
| 107 | F | A | 0.0000 | |
| 108 | I | A | 0.0000 | |
| 109 | E | A | -1.3243 | |
| 110 | A | A | 0.0000 | |
| 111 | V | A | 0.0000 | |
| 112 | Y | A | 0.0000 | |
| 113 | R | A | -1.8143 | |
| 114 | I | A | 0.0000 | |
| 115 | Y | A | 0.0000 | |
| 116 | D | A | -0.7847 | |
| 117 | S | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | Y | A | 0.4276 | |
| 120 | K | A | -0.2943 | |
| 121 | I | A | 0.0000 | |
| 122 | Y | A | 0.0000 | |
| 123 | M | A | 1.1806 | |
| 124 | Y | A | 1.0409 | |
| 125 | R | A | 0.3878 | |
| 126 | G | A | 0.5511 | |
| 127 | M | A | 1.3902 | |
| 128 | F | A | 2.5673 | |
| 129 | Y | A | 2.0003 | |
| 130 | P | A | 0.8619 | |
| 131 | H | A | 0.3648 | |
| 132 | P | A | 0.0000 | |
| 133 | Y | A | 0.3070 | |
| 134 | E | A | -1.2147 | |
| 135 | V | A | -0.2819 | |
| 136 | F | A | 0.1602 | |
| 137 | Y | A | 0.3646 | |
| 138 | K | A | -0.9276 | |
| 139 | F | A | 0.0000 | |
| 140 | E | A | 0.0000 | |
| 141 | K | A | -1.6867 | |
| 142 | V | A | 0.0000 | |
| 143 | F | A | 0.0000 | |
| 144 | L | A | -1.3758 | |
| 145 | E | A | -1.3164 | |
| 146 | A | A | 0.0000 | |
| 147 | L | A | 0.0000 | |
| 148 | T | A | 0.0000 | |
| 149 | I | A | 0.0000 | |
| 150 | I | A | 0.0000 | |
| 151 | I | A | -0.8927 | |
| 152 | A | A | -0.3419 | |
| 153 | V | A | -0.0215 | |
| 154 | D | A | -1.0134 | |
| 155 | P | A | -1.7614 | |
| 156 | E | A | -2.8605 | |
| 157 | G | A | -2.4386 | |
| 158 | A | A | 0.0000 | |
| 159 | K | A | -3.1303 | |
| 160 | K | A | -3.2284 | |
| 161 | F | A | 0.0000 | |
| 162 | V | A | -2.1642 | |
| 163 | E | A | -3.1856 | |
| 164 | A | A | 0.0000 | |
| 165 | L | A | 0.0000 | |
| 166 | K | A | -3.2820 | |
| 167 | K | A | -3.5570 | |
| 168 | I | A | 0.0000 | |
| 169 | H | A | 0.0000 | |
| 170 | E | A | -3.3396 | |
| 171 | E | A | -2.7757 | |
| 172 | V | A | -1.2986 | |
| 173 | Y | A | -0.8107 | |
| 174 | G | A | -1.9137 | |
| 175 | D | A | -2.3656 | |
| 176 | S | A | -2.2878 | |
| 177 | S | A | -1.6196 | |
| 178 | Y | A | -0.9904 | |
| 179 | V | A | 0.0000 | |
| 180 | D | A | -2.6974 | |
| 181 | K | A | -2.9320 | |
| 182 | L | A | 0.0000 | |
| 183 | I | A | -1.9356 | |
| 184 | A | A | -2.3331 | |
| 185 | E | A | -2.9793 | |
| 186 | A | A | 0.0000 | |
| 187 | E | A | -2.5734 | |
| 188 | A | A | -1.7004 | |
| 189 | R | A | -1.6225 | |
| 190 | A | A | 0.0000 | |
| 191 | P | A | -0.7699 | |
| 192 | A | A | -0.6463 | |
| 193 | V | A | -0.6256 | |
| 194 | A | A | -0.5495 | |
| 195 | A | A | -0.9005 | |
| 196 | R | A | -2.0866 | |
| 197 | L | A | -1.1691 | |
| 198 | P | A | -1.4139 | |
| 199 | E | A | -2.2167 | |
| 200 | L | A | 0.0000 | |
| 201 | V | A | -1.0293 | |
| 202 | A | A | -1.2584 | |
| 203 | R | A | -2.1845 | |
| 204 | V | A | -1.3420 | |
| 205 | A | A | -1.1033 | |
| 206 | N | A | -1.6885 | |
| 207 | S | A | -1.2523 |