| Chain sequence(s) |
H: EVQLLESGGGLVQPGGSLRLSCATSGSIFSINAMGWFRQAPGKQRELVAVITSGGSTLYAESVKGRFTISRDNSKNTVYLQMSSLRPEDTAVYYCNAHVGLKVPTIQELSLGFGSWGQGTMVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:33)
[INFO] Main: Simulation completed successfully. (00:00:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.9276 | |
| 2 | V | H | -0.8369 | |
| 3 | Q | H | -1.0661 | |
| 4 | L | H | 0.0000 | |
| 5 | L | H | 1.0518 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.1934 | |
| 8 | G | H | -0.7492 | |
| 9 | G | H | -0.0927 | |
| 11 | G | H | 0.6374 | |
| 12 | L | H | 1.3301 | |
| 13 | V | H | 0.0271 | |
| 14 | Q | H | -1.3216 | |
| 15 | P | H | -1.6577 | |
| 16 | G | H | -1.2837 | |
| 17 | G | H | -0.7764 | |
| 18 | S | H | -0.8331 | |
| 19 | L | H | -0.4268 | |
| 20 | R | H | -1.2466 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.1712 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.2347 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -0.3663 | |
| 27 | G | H | -0.7185 | |
| 28 | S | H | 0.2292 | |
| 29 | I | H | 1.0233 | |
| 30 | F | H | 2.3906 | |
| 35 | S | H | 2.0124 | |
| 36 | I | H | 1.4486 | |
| 37 | N | H | 0.0000 | |
| 38 | A | H | 0.0000 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | F | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.1638 | |
| 45 | A | H | -1.1379 | |
| 46 | P | H | -0.9853 | |
| 47 | G | H | -1.3330 | |
| 48 | K | H | -1.9744 | |
| 49 | Q | H | -2.2416 | |
| 50 | R | H | -1.8178 | |
| 51 | E | H | -1.1866 | |
| 52 | L | H | 0.0254 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | V | H | 0.0000 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | 0.0000 | |
| 58 | S | H | -0.3554 | |
| 59 | G | H | -0.5965 | |
| 63 | G | H | -0.6874 | |
| 64 | S | H | -0.3242 | |
| 65 | T | H | 0.1690 | |
| 66 | L | H | 0.6181 | |
| 67 | Y | H | -0.2204 | |
| 68 | A | H | -1.0281 | |
| 69 | E | H | -2.3021 | |
| 70 | S | H | -1.7218 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.3770 | |
| 74 | G | H | -1.6317 | |
| 75 | R | H | -1.2019 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.5107 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.5679 | |
| 80 | R | H | -1.4142 | |
| 81 | D | H | -2.0436 | |
| 82 | N | H | -2.5144 | |
| 83 | S | H | -2.0463 | |
| 84 | K | H | -2.7806 | |
| 85 | N | H | -2.0018 | |
| 86 | T | H | -1.3411 | |
| 87 | V | H | 0.0000 | |
| 88 | Y | H | -0.3437 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.7974 | |
| 91 | M | H | 0.0000 | |
| 92 | S | H | -0.8131 | |
| 93 | S | H | -0.9727 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.2152 | |
| 96 | P | H | -1.8921 | |
| 97 | E | H | -2.3122 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.5977 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | 0.2220 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.1620 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | H | H | 0.5988 | |
| 108 | V | H | 1.4432 | |
| 109 | G | H | 1.0904 | |
| 110 | L | H | 2.0057 | |
| 111 | K | H | 0.1360 | |
| 111A | V | H | 1.5527 | |
| 111B | P | H | 0.9811 | |
| 111C | T | H | 0.7216 | |
| 112D | I | H | 1.3727 | |
| 112C | Q | H | 0.5880 | |
| 112B | E | H | 0.1513 | |
| 112A | L | H | 1.4772 | |
| 112 | S | H | 0.7800 | |
| 113 | L | H | 1.5498 | |
| 114 | G | H | 0.5765 | |
| 115 | F | H | 0.0000 | |
| 116 | G | H | -0.0475 | |
| 117 | S | H | -0.0845 | |
| 118 | W | H | 0.1165 | |
| 119 | G | H | -0.0880 | |
| 120 | Q | H | -0.8323 | |
| 121 | G | H | -0.0648 | |
| 122 | T | H | 0.1285 | |
| 123 | M | H | 0.7262 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | 0.1248 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.8194 | |
| 128 | S | H | -0.7298 |