| Chain sequence(s) |
I: ILKRCKTYDDCKDVCKARKGKCEFGICKCMIK
input PDB |
| Selected Chain(s) | I |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with I chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:44)
[INFO] Main: Simulation completed successfully. (00:00:45)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | I | I | 1.4067 | |
| 2 | L | I | 1.2712 | |
| 3 | K | I | -0.7819 | |
| 4 | R | I | -1.7191 | |
| 5 | C | I | 0.0000 | |
| 6 | K | I | -2.3723 | |
| 7 | T | I | -2.1720 | |
| 8 | Y | I | -2.5758 | |
| 9 | D | I | -3.4596 | |
| 10 | D | I | -3.3350 | |
| 11 | C | I | 0.0000 | |
| 12 | K | I | -4.3014 | |
| 13 | D | I | -3.4859 | |
| 14 | V | I | -1.5545 | |
| 15 | C | I | 0.0000 | |
| 16 | K | I | -3.6187 | |
| 17 | A | I | -2.4541 | |
| 18 | R | I | -3.0571 | |
| 19 | K | I | -3.1969 | |
| 20 | G | I | -2.3932 | |
| 21 | K | I | -2.3483 | |
| 22 | C | I | -1.5329 | |
| 23 | E | I | -0.2820 | |
| 24 | F | I | 1.1962 | |
| 25 | G | I | -0.1762 | |
| 26 | I | I | -0.2768 | |
| 27 | C | I | 0.0000 | |
| 28 | K | I | -1.0295 | |
| 29 | C | I | 0.0000 | |
| 30 | M | I | 0.4372 | |
| 31 | I | I | 1.0125 | |
| 32 | K | I | -0.1009 |