Project name: query_structure

Status: done

Started: 2026-03-16 21:27:08
Settings
Chain sequence(s) I: ILKRCKTYDDCKDVCKARKGKCEFGICKCMIK
input PDB
Selected Chain(s) I
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with I chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-4.3014
Maximal score value
1.4067
Average score
-1.2781
Total score value
-40.9003

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 I I 1.4067
2 L I 1.2712
3 K I -0.7819
4 R I -1.7191
5 C I 0.0000
6 K I -2.3723
7 T I -2.1720
8 Y I -2.5758
9 D I -3.4596
10 D I -3.3350
11 C I 0.0000
12 K I -4.3014
13 D I -3.4859
14 V I -1.5545
15 C I 0.0000
16 K I -3.6187
17 A I -2.4541
18 R I -3.0571
19 K I -3.1969
20 G I -2.3932
21 K I -2.3483
22 C I -1.5329
23 E I -0.2820
24 F I 1.1962
25 G I -0.1762
26 I I -0.2768
27 C I 0.0000
28 K I -1.0295
29 C I 0.0000
30 M I 0.4372
31 I I 1.0125
32 K I -0.1009
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Laboratory of Theory of Biopolymers 2018