Project name: query_structure

Status: done

Started: 2026-03-16 20:09:03
Settings
Chain sequence(s) A: PDRPKFCYLPDDPGVCKAHIPRFYYNPASNKCKEFIYGGCGGNANNFETRAECRHTCVASRKGGPRRP
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:41)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:41)
Show buried residues

Minimal score value
-3.8374
Maximal score value
1.361
Average score
-1.3167
Total score value
-89.5357

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 P A -1.8386
2 D A -2.8321
3 R A -2.3587
4 P A -1.4349
5 K A -1.6227
6 F A -0.0364
7 C A 0.0000
8 Y A 0.2232
9 L A -0.0221
10 P A -0.6646
11 D A -2.0870
12 D A -1.4666
13 P A -0.6541
14 G A 0.0952
15 V A 1.3610
16 C A 0.1974
17 K A -1.2566
18 A A -0.6113
19 H A -0.6812
20 I A 0.2811
21 P A -0.6744
22 R A -1.8159
23 F A 0.0000
24 Y A 0.0000
25 Y A 0.0000
26 N A -1.3874
27 P A -1.0475
28 A A -0.5585
29 S A -1.1560
30 N A -2.1482
31 K A -2.7360
32 C A -2.7904
33 K A -2.7577
34 E A -3.0038
35 F A 0.0000
36 I A 0.1038
37 Y A -0.1601
38 G A -0.1448
39 G A -0.1649
40 C A 0.5733
41 G A 0.0139
42 G A -0.9836
43 N A -0.9224
44 A A -0.3703
45 N A 0.0000
46 N A -1.6697
47 F A -1.9626
48 E A -2.7653
49 T A -2.8916
50 R A -3.8374
51 A A -2.3013
52 E A -2.7242
53 C A 0.0000
54 R A -3.2938
55 H A -2.4470
56 T A -1.4878
57 C A 0.0000
58 V A -1.7774
59 A A -1.7342
60 S A -1.8865
61 R A -2.9999
62 K A -3.0018
63 G A -2.5059
64 G A -2.5325
65 P A -2.2775
66 R A -3.1125
67 R A -3.1201
68 P A -1.6668
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Laboratory of Theory of Biopolymers 2018