| Chain sequence(s) |
A: PDRPKFCYLPDDPGVCKAHIPRFYYNPASNKCKEFIYGGCGGNANNFETRAECRHTCVASRKGGPRRP
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:41)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | A | -1.8386 | |
| 2 | D | A | -2.8321 | |
| 3 | R | A | -2.3587 | |
| 4 | P | A | -1.4349 | |
| 5 | K | A | -1.6227 | |
| 6 | F | A | -0.0364 | |
| 7 | C | A | 0.0000 | |
| 8 | Y | A | 0.2232 | |
| 9 | L | A | -0.0221 | |
| 10 | P | A | -0.6646 | |
| 11 | D | A | -2.0870 | |
| 12 | D | A | -1.4666 | |
| 13 | P | A | -0.6541 | |
| 14 | G | A | 0.0952 | |
| 15 | V | A | 1.3610 | |
| 16 | C | A | 0.1974 | |
| 17 | K | A | -1.2566 | |
| 18 | A | A | -0.6113 | |
| 19 | H | A | -0.6812 | |
| 20 | I | A | 0.2811 | |
| 21 | P | A | -0.6744 | |
| 22 | R | A | -1.8159 | |
| 23 | F | A | 0.0000 | |
| 24 | Y | A | 0.0000 | |
| 25 | Y | A | 0.0000 | |
| 26 | N | A | -1.3874 | |
| 27 | P | A | -1.0475 | |
| 28 | A | A | -0.5585 | |
| 29 | S | A | -1.1560 | |
| 30 | N | A | -2.1482 | |
| 31 | K | A | -2.7360 | |
| 32 | C | A | -2.7904 | |
| 33 | K | A | -2.7577 | |
| 34 | E | A | -3.0038 | |
| 35 | F | A | 0.0000 | |
| 36 | I | A | 0.1038 | |
| 37 | Y | A | -0.1601 | |
| 38 | G | A | -0.1448 | |
| 39 | G | A | -0.1649 | |
| 40 | C | A | 0.5733 | |
| 41 | G | A | 0.0139 | |
| 42 | G | A | -0.9836 | |
| 43 | N | A | -0.9224 | |
| 44 | A | A | -0.3703 | |
| 45 | N | A | 0.0000 | |
| 46 | N | A | -1.6697 | |
| 47 | F | A | -1.9626 | |
| 48 | E | A | -2.7653 | |
| 49 | T | A | -2.8916 | |
| 50 | R | A | -3.8374 | |
| 51 | A | A | -2.3013 | |
| 52 | E | A | -2.7242 | |
| 53 | C | A | 0.0000 | |
| 54 | R | A | -3.2938 | |
| 55 | H | A | -2.4470 | |
| 56 | T | A | -1.4878 | |
| 57 | C | A | 0.0000 | |
| 58 | V | A | -1.7774 | |
| 59 | A | A | -1.7342 | |
| 60 | S | A | -1.8865 | |
| 61 | R | A | -2.9999 | |
| 62 | K | A | -3.0018 | |
| 63 | G | A | -2.5059 | |
| 64 | G | A | -2.5325 | |
| 65 | P | A | -2.2775 | |
| 66 | R | A | -3.1125 | |
| 67 | R | A | -3.1201 | |
| 68 | P | A | -1.6668 |