| Chain sequence(s) |
A: RADARADARADARADA
B: RADARADARADARADA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:41)
[INFO] Main: Simulation completed successfully. (00:00:42)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | R | A | -2.7335 | |
| 2 | A | A | -1.8661 | |
| 3 | D | A | -2.9250 | |
| 4 | A | A | -3.2115 | |
| 5 | R | A | -4.5950 | |
| 6 | A | A | -3.0447 | |
| 7 | D | A | -3.6074 | |
| 8 | A | A | 0.0000 | |
| 9 | R | A | -4.5241 | |
| 10 | A | A | -2.7073 | |
| 11 | D | A | -3.6368 | |
| 12 | A | A | 0.0000 | |
| 13 | R | A | -3.4738 | |
| 14 | A | A | -2.1799 | |
| 15 | D | A | -3.0333 | |
| 16 | A | A | -1.8684 | |
| 1 | R | B | -2.8828 | |
| 2 | A | B | -2.0025 | |
| 3 | D | B | -3.1798 | |
| 4 | A | B | -3.3530 | |
| 5 | R | B | -4.6575 | |
| 6 | A | B | -3.2374 | |
| 7 | D | B | -3.9989 | |
| 8 | A | B | 0.0000 | |
| 9 | R | B | -4.4745 | |
| 10 | A | B | -2.9382 | |
| 11 | D | B | -4.0024 | |
| 12 | A | B | 0.0000 | |
| 13 | R | B | -3.7437 | |
| 14 | A | B | -2.3567 | |
| 15 | D | B | -3.1440 | |
| 16 | A | B | -1.9315 |