| Chain sequence(s) |
A: FFGHKGG
C: FFGHKGG B: FFGHKGG E: FFGHKGG D: FFGHKGG G: FFGHKGG F: FFGHKGG I: FFGHKGG H: FFGHKGG K: FFGHKGG J: FFGHKGG M: FFGHKGG L: FFGHKGG O: FFGHKGG N: FFGHKGG Q: FFGHKGG P: FFGHKGG S: FFGHKGG R: FFGHKGG T: FFGHKGG input PDB |
| Selected Chain(s) | A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:14)
[INFO] Main: Simulation completed successfully. (00:02:18)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.6681 | |
| 2 | F | A | 2.6381 | |
| 3 | G | A | -0.0288 | |
| 4 | H | A | -0.6900 | |
| 5 | K | A | -2.5703 | |
| 6 | G | A | -1.6670 | |
| 7 | G | A | -1.0073 | |
| 1 | F | B | 4.0792 | |
| 2 | F | B | 3.9535 | |
| 3 | G | B | 0.4627 | |
| 4 | H | B | -0.9255 | |
| 5 | K | B | -2.1912 | |
| 6 | G | B | -1.7751 | |
| 7 | G | B | -1.4941 | |
| 1 | F | C | 2.1561 | |
| 2 | F | C | 1.3310 | |
| 3 | G | C | 0.0300 | |
| 4 | H | C | -1.9593 | |
| 5 | K | C | -2.7468 | |
| 6 | G | C | -1.8336 | |
| 7 | G | C | -1.2226 | |
| 1 | F | D | 3.1115 | |
| 2 | F | D | 3.0510 | |
| 3 | G | D | 0.4370 | |
| 4 | H | D | -1.0232 | |
| 5 | K | D | -2.7344 | |
| 6 | G | D | -1.8693 | |
| 7 | G | D | -1.2460 | |
| 1 | F | E | 3.1933 | |
| 2 | F | E | 2.3920 | |
| 3 | G | E | -0.1063 | |
| 4 | H | E | -1.3831 | |
| 5 | K | E | -2.4108 | |
| 6 | G | E | -1.8576 | |
| 7 | G | E | -1.2360 | |
| 1 | F | F | 3.2421 | |
| 2 | F | F | 2.0948 | |
| 3 | G | F | 0.5018 | |
| 4 | H | F | -1.0018 | |
| 5 | K | F | -2.6170 | |
| 6 | G | F | -2.2897 | |
| 7 | G | F | -1.5125 | |
| 1 | F | G | 3.3874 | |
| 2 | F | G | 0.8525 | |
| 3 | G | G | -0.5855 | |
| 4 | H | G | -2.2193 | |
| 5 | K | G | -3.1842 | |
| 6 | G | G | -2.4103 | |
| 7 | G | G | -1.5050 | |
| 1 | F | H | 3.8971 | |
| 2 | F | H | 1.9538 | |
| 3 | G | H | -0.1618 | |
| 4 | H | H | -1.5858 | |
| 5 | K | H | -3.1098 | |
| 6 | G | H | -2.2560 | |
| 7 | G | H | -1.4954 | |
| 1 | F | I | 3.8921 | |
| 2 | F | I | 2.0938 | |
| 3 | G | I | 0.4885 | |
| 4 | H | I | -1.9611 | |
| 5 | K | I | -2.9396 | |
| 6 | G | I | -2.0865 | |
| 7 | G | I | -1.1823 | |
| 1 | F | J | 4.0508 | |
| 2 | F | J | 2.5132 | |
| 3 | G | J | 0.7561 | |
| 4 | H | J | -1.5624 | |
| 5 | K | J | -3.0279 | |
| 6 | G | J | -2.0603 | |
| 7 | G | J | -1.6159 | |
| 1 | F | K | 3.9869 | |
| 2 | F | K | 2.9056 | |
| 3 | G | K | 0.0000 | |
| 4 | H | K | -0.7310 | |
| 5 | K | K | -1.7119 | |
| 6 | G | K | -1.3964 | |
| 7 | G | K | -1.0419 | |
| 1 | F | L | 3.2291 | |
| 2 | F | L | 2.8475 | |
| 3 | G | L | 0.5416 | |
| 4 | H | L | -1.1536 | |
| 5 | K | L | -1.6361 | |
| 6 | G | L | -1.5776 | |
| 7 | G | L | -1.1095 | |
| 1 | F | M | 3.7374 | |
| 2 | F | M | 4.2316 | |
| 3 | G | M | 1.4121 | |
| 4 | H | M | -0.8660 | |
| 5 | K | M | -2.2017 | |
| 6 | G | M | -1.8530 | |
| 7 | G | M | -1.5916 | |
| 1 | F | N | 3.0747 | |
| 2 | F | N | 3.2342 | |
| 3 | G | N | 0.8651 | |
| 4 | H | N | -1.3147 | |
| 5 | K | N | -2.5992 | |
| 6 | G | N | -1.8547 | |
| 7 | G | N | -1.3644 | |
| 1 | F | O | 3.9737 | |
| 2 | F | O | 2.1598 | |
| 3 | G | O | -0.2232 | |
| 4 | H | O | -1.5254 | |
| 5 | K | O | -2.4460 | |
| 6 | G | O | -1.8104 | |
| 7 | G | O | -1.2507 | |
| 1 | F | P | 3.7640 | |
| 2 | F | P | 3.8795 | |
| 3 | G | P | 1.0698 | |
| 4 | H | P | -1.4400 | |
| 5 | K | P | -3.0748 | |
| 6 | G | P | -2.5409 | |
| 7 | G | P | -1.8556 | |
| 1 | F | Q | 4.2374 | |
| 2 | F | Q | 3.9614 | |
| 3 | G | Q | 0.8111 | |
| 4 | H | Q | -1.6685 | |
| 5 | K | Q | -3.4671 | |
| 6 | G | Q | -2.4911 | |
| 7 | G | Q | -1.8650 | |
| 1 | F | R | 4.1691 | |
| 2 | F | R | 3.0879 | |
| 3 | G | R | -0.1003 | |
| 4 | H | R | -1.7081 | |
| 5 | K | R | -2.9269 | |
| 6 | G | R | -2.0753 | |
| 7 | G | R | -1.3953 | |
| 1 | F | S | 3.5827 | |
| 2 | F | S | 2.2945 | |
| 3 | G | S | -0.3228 | |
| 4 | H | S | -1.7786 | |
| 5 | K | S | -2.4063 | |
| 6 | G | S | -2.1276 | |
| 7 | G | S | -1.3548 | |
| 1 | F | T | 3.4149 | |
| 2 | F | T | 2.1294 | |
| 3 | G | T | -0.0906 | |
| 4 | H | T | -2.1361 | |
| 5 | K | T | -2.8242 | |
| 6 | G | T | -2.0999 | |
| 7 | G | T | -1.2968 |