Project name: FFGHKGG20

Status: done

Started: 2026-05-21 13:58:33
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Chain sequence(s) A: FFGHKGG
C: FFGHKGG
B: FFGHKGG
E: FFGHKGG
D: FFGHKGG
G: FFGHKGG
F: FFGHKGG
I: FFGHKGG
H: FFGHKGG
K: FFGHKGG
J: FFGHKGG
M: FFGHKGG
L: FFGHKGG
O: FFGHKGG
N: FFGHKGG
Q: FFGHKGG
P: FFGHKGG
S: FFGHKGG
R: FFGHKGG
T: FFGHKGG
input PDB
Selected Chain(s) A,C,B,E,D,G,F,I,H,K,J,M,L,O,N,Q,P,S,R,T
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:02:14)
[INFO]       Main:     Simulation completed successfully.                                          (00:02:18)
Show buried residues

Minimal score value
-3.4671
Maximal score value
4.2374
Average score
-0.1345
Total score value
-18.8255

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 F A 2.6681
2 F A 2.6381
3 G A -0.0288
4 H A -0.6900
5 K A -2.5703
6 G A -1.6670
7 G A -1.0073
1 F B 4.0792
2 F B 3.9535
3 G B 0.4627
4 H B -0.9255
5 K B -2.1912
6 G B -1.7751
7 G B -1.4941
1 F C 2.1561
2 F C 1.3310
3 G C 0.0300
4 H C -1.9593
5 K C -2.7468
6 G C -1.8336
7 G C -1.2226
1 F D 3.1115
2 F D 3.0510
3 G D 0.4370
4 H D -1.0232
5 K D -2.7344
6 G D -1.8693
7 G D -1.2460
1 F E 3.1933
2 F E 2.3920
3 G E -0.1063
4 H E -1.3831
5 K E -2.4108
6 G E -1.8576
7 G E -1.2360
1 F F 3.2421
2 F F 2.0948
3 G F 0.5018
4 H F -1.0018
5 K F -2.6170
6 G F -2.2897
7 G F -1.5125
1 F G 3.3874
2 F G 0.8525
3 G G -0.5855
4 H G -2.2193
5 K G -3.1842
6 G G -2.4103
7 G G -1.5050
1 F H 3.8971
2 F H 1.9538
3 G H -0.1618
4 H H -1.5858
5 K H -3.1098
6 G H -2.2560
7 G H -1.4954
1 F I 3.8921
2 F I 2.0938
3 G I 0.4885
4 H I -1.9611
5 K I -2.9396
6 G I -2.0865
7 G I -1.1823
1 F J 4.0508
2 F J 2.5132
3 G J 0.7561
4 H J -1.5624
5 K J -3.0279
6 G J -2.0603
7 G J -1.6159
1 F K 3.9869
2 F K 2.9056
3 G K 0.0000
4 H K -0.7310
5 K K -1.7119
6 G K -1.3964
7 G K -1.0419
1 F L 3.2291
2 F L 2.8475
3 G L 0.5416
4 H L -1.1536
5 K L -1.6361
6 G L -1.5776
7 G L -1.1095
1 F M 3.7374
2 F M 4.2316
3 G M 1.4121
4 H M -0.8660
5 K M -2.2017
6 G M -1.8530
7 G M -1.5916
1 F N 3.0747
2 F N 3.2342
3 G N 0.8651
4 H N -1.3147
5 K N -2.5992
6 G N -1.8547
7 G N -1.3644
1 F O 3.9737
2 F O 2.1598
3 G O -0.2232
4 H O -1.5254
5 K O -2.4460
6 G O -1.8104
7 G O -1.2507
1 F P 3.7640
2 F P 3.8795
3 G P 1.0698
4 H P -1.4400
5 K P -3.0748
6 G P -2.5409
7 G P -1.8556
1 F Q 4.2374
2 F Q 3.9614
3 G Q 0.8111
4 H Q -1.6685
5 K Q -3.4671
6 G Q -2.4911
7 G Q -1.8650
1 F R 4.1691
2 F R 3.0879
3 G R -0.1003
4 H R -1.7081
5 K R -2.9269
6 G R -2.0753
7 G R -1.3953
1 F S 3.5827
2 F S 2.2945
3 G S -0.3228
4 H S -1.7786
5 K S -2.4063
6 G S -2.1276
7 G S -1.3548
1 F T 3.4149
2 F T 2.1294
3 G T -0.0906
4 H T -2.1361
5 K T -2.8242
6 G T -2.0999
7 G T -1.2968
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Laboratory of Theory of Biopolymers 2018