| Chain sequence(s) |
L: AELDEPEGISLLLPPP
input PDB |
| Selected Chain(s) | L |
| Distance of aggregation | 5 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with L chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:10)
[INFO] Main: Simulation completed successfully. (00:00:11)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 53 | A | L | -0.3208 | |
| 54 | E | L | -1.5315 | |
| 55 | L | L | 0.9005 | |
| 56 | D | L | -1.6067 | |
| 57 | E | L | -0.8847 | |
| 58 | P | L | -0.6775 | |
| 59 | E | L | -1.9171 | |
| 60 | G | L | -0.2395 | |
| 61 | I | L | 1.9491 | |
| 62 | S | L | 0.4914 | |
| 63 | L | L | 1.3364 | |
| 64 | L | L | 2.0195 | |
| 65 | L | L | 1.7816 | |
| 66 | P | L | -0.0259 | |
| 67 | P | L | -0.3467 | |
| 68 | P | L | -0.2911 |