| Chain sequence(s) |
A: KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:20)
[INFO] Main: Simulation completed successfully. (00:01:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | K | A | -1.5300 | |
| 2 | V | A | 0.0867 | |
| 3 | F | A | 0.0000 | |
| 4 | G | A | -1.0097 | |
| 5 | R | A | -1.2466 | |
| 6 | C | A | -1.0068 | |
| 7 | E | A | -1.1966 | |
| 8 | L | A | 0.0000 | |
| 9 | A | A | 0.0000 | |
| 10 | A | A | -1.1842 | |
| 11 | A | A | -1.3807 | |
| 12 | M | A | 0.0000 | |
| 13 | K | A | -2.2600 | |
| 14 | R | A | -2.5358 | |
| 15 | H | A | -2.0213 | |
| 16 | G | A | -1.9774 | |
| 17 | L | A | 0.0000 | |
| 18 | D | A | -2.2858 | |
| 19 | N | A | -2.3142 | |
| 20 | Y | A | -1.7759 | |
| 21 | R | A | -2.4297 | |
| 22 | G | A | -1.8160 | |
| 23 | Y | A | -1.2599 | |
| 24 | S | A | -1.4249 | |
| 25 | L | A | 0.0000 | |
| 26 | G | A | 0.0000 | |
| 27 | N | A | -1.0898 | |
| 28 | W | A | 0.0000 | |
| 29 | V | A | 0.0000 | |
| 30 | C | A | 0.0000 | |
| 31 | A | A | 0.0000 | |
| 32 | A | A | 0.0000 | |
| 33 | K | A | -1.0211 | |
| 34 | F | A | -0.0004 | |
| 35 | E | A | -0.2871 | |
| 36 | S | A | 0.0000 | |
| 37 | N | A | -1.1903 | |
| 38 | F | A | 0.0000 | |
| 39 | N | A | -1.0780 | |
| 40 | T | A | 0.0000 | |
| 41 | Q | A | -1.4116 | |
| 42 | A | A | -1.1227 | |
| 43 | T | A | -1.3302 | |
| 44 | N | A | -1.9773 | |
| 45 | R | A | -2.8047 | |
| 46 | N | A | -2.1212 | |
| 47 | T | A | -1.3019 | |
| 48 | D | A | -1.7703 | |
| 49 | G | A | -1.8851 | |
| 50 | S | A | 0.0000 | |
| 51 | T | A | 0.0000 | |
| 52 | D | A | -1.2272 | |
| 53 | Y | A | 0.0000 | |
| 54 | G | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | L | A | 0.0000 | |
| 57 | Q | A | -0.3495 | |
| 58 | I | A | 0.0000 | |
| 59 | N | A | -0.6771 | |
| 60 | S | A | 0.0000 | |
| 61 | R | A | -1.1705 | |
| 62 | W | A | -0.0910 | |
| 63 | W | A | -0.5059 | |
| 64 | C | A | 0.0000 | |
| 65 | N | A | -1.9142 | |
| 66 | D | A | -1.6243 | |
| 67 | G | A | -1.8294 | |
| 68 | R | A | -2.5042 | |
| 69 | T | A | 0.0000 | |
| 70 | P | A | -1.5339 | |
| 71 | G | A | -1.4112 | |
| 72 | S | A | -1.6980 | |
| 73 | R | A | -1.9861 | |
| 74 | N | A | -1.3741 | |
| 75 | L | A | -0.3905 | |
| 76 | C | A | -0.9548 | |
| 77 | N | A | -1.3681 | |
| 78 | I | A | -0.5773 | |
| 79 | P | A | -0.8332 | |
| 80 | C | A | 0.0000 | |
| 81 | S | A | -0.4522 | |
| 82 | A | A | -0.3640 | |
| 83 | L | A | 0.0000 | |
| 84 | L | A | -0.8392 | |
| 85 | S | A | -1.2113 | |
| 86 | S | A | -1.5870 | |
| 87 | D | A | -2.1131 | |
| 88 | I | A | 0.0000 | |
| 89 | T | A | -1.0157 | |
| 90 | A | A | -0.7348 | |
| 91 | S | A | 0.0000 | |
| 92 | V | A | 0.0000 | |
| 93 | N | A | -1.7949 | |
| 94 | C | A | 0.0000 | |
| 95 | A | A | 0.0000 | |
| 96 | K | A | -2.0339 | |
| 97 | K | A | -2.2683 | |
| 98 | I | A | 0.0000 | |
| 99 | V | A | 0.0000 | |
| 100 | S | A | -2.3148 | |
| 101 | D | A | -2.8143 | |
| 102 | G | A | -2.1893 | |
| 103 | N | A | -2.1076 | |
| 104 | G | A | -1.7204 | |
| 105 | M | A | 0.0000 | |
| 106 | N | A | -1.1145 | |
| 107 | A | A | -0.5010 | |
| 108 | W | A | 0.0000 | |
| 109 | V | A | 0.6504 | |
| 110 | A | A | -0.6523 | |
| 111 | W | A | 0.0000 | |
| 112 | R | A | -2.5964 | |
| 113 | N | A | -2.6753 | |
| 114 | R | A | -2.9443 | |
| 115 | C | A | 0.0000 | |
| 116 | K | A | -3.3584 | |
| 117 | G | A | -2.2715 | |
| 118 | T | A | -2.0988 | |
| 119 | D | A | -2.4102 | |
| 120 | V | A | -1.8596 | |
| 121 | Q | A | -1.8381 | |
| 122 | A | A | -1.3090 | |
| 123 | W | A | -0.8573 | |
| 124 | I | A | -0.6890 | |
| 125 | R | A | -1.7912 | |
| 126 | G | A | -1.2576 | |
| 127 | C | A | -1.0873 | |
| 128 | R | A | -1.3860 | |
| 129 | L | A | 0.0300 |