| Chain sequence(s) |
A: DIQMTQSPSSLSASVGDRVTITCRASQGPTSYLAWYQQKPGKAPKLLIYATKTLQSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQLNSYPLTFGGGTKVEIKGGGGSGGGGSGGGGSGGGGSQVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARGVLDVWGQGTTVTVSS
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:53)
[INFO] Main: Simulation completed successfully. (00:01:55)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.0077 | |
| 2 | I | A | -1.7731 | |
| 3 | Q | A | -2.1873 | |
| 4 | M | A | 0.0000 | |
| 5 | T | A | -1.2884 | |
| 6 | Q | A | -0.9758 | |
| 7 | S | A | -0.8068 | |
| 8 | P | A | -0.6021 | |
| 9 | S | A | -0.8485 | |
| 10 | S | A | -1.1094 | |
| 11 | L | A | -0.7742 | |
| 12 | S | A | -1.1969 | |
| 13 | A | A | 0.0000 | |
| 14 | S | A | -0.5942 | |
| 15 | V | A | 0.3246 | |
| 16 | G | A | -1.0681 | |
| 17 | D | A | -2.0791 | |
| 18 | R | A | -2.8124 | |
| 19 | V | A | 0.0000 | |
| 20 | T | A | -0.6192 | |
| 21 | I | A | 0.0000 | |
| 22 | T | A | -0.8021 | |
| 23 | C | A | 0.0000 | |
| 24 | R | A | -2.6278 | |
| 25 | A | A | 0.0000 | |
| 26 | S | A | -1.9986 | |
| 27 | Q | A | -2.3234 | |
| 28 | G | A | -1.7108 | |
| 29 | P | A | -1.0445 | |
| 30 | T | A | 0.0000 | |
| 31 | S | A | 0.0781 | |
| 32 | Y | A | 1.1379 | |
| 33 | L | A | 0.0000 | |
| 34 | A | A | 0.0000 | |
| 35 | W | A | 0.0000 | |
| 36 | Y | A | 0.0000 | |
| 37 | Q | A | 0.0000 | |
| 38 | Q | A | 0.0000 | |
| 39 | K | A | -1.6593 | |
| 40 | P | A | -1.3011 | |
| 41 | G | A | -1.6748 | |
| 42 | K | A | -2.5621 | |
| 43 | A | A | -1.5933 | |
| 44 | P | A | 0.0000 | |
| 45 | K | A | -1.4072 | |
| 46 | L | A | 0.0000 | |
| 47 | L | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | Y | A | 0.6386 | |
| 50 | A | A | 0.4366 | |
| 51 | T | A | 0.0000 | |
| 52 | K | A | -1.4935 | |
| 53 | T | A | -0.5518 | |
| 54 | L | A | -0.1018 | |
| 55 | Q | A | -0.4642 | |
| 56 | S | A | -0.3915 | |
| 57 | G | A | -0.5234 | |
| 58 | V | A | -0.3512 | |
| 59 | P | A | -0.3292 | |
| 60 | S | A | -0.5724 | |
| 61 | R | A | -1.1548 | |
| 62 | F | A | 0.0000 | |
| 63 | S | A | -0.6811 | |
| 64 | G | A | -0.8631 | |
| 65 | S | A | -1.1555 | |
| 66 | G | A | -1.3488 | |
| 67 | S | A | -0.9378 | |
| 68 | G | A | -1.3089 | |
| 69 | T | A | -1.7938 | |
| 70 | D | A | -2.0534 | |
| 71 | F | A | 0.0000 | |
| 72 | T | A | -0.9239 | |
| 73 | L | A | 0.0000 | |
| 74 | T | A | -0.8200 | |
| 75 | I | A | 0.0000 | |
| 76 | S | A | -2.0841 | |
| 77 | R | A | -2.7662 | |
| 78 | L | A | 0.0000 | |
| 79 | Q | A | -1.1403 | |
| 80 | P | A | -0.5713 | |
| 81 | E | A | -1.2921 | |
| 82 | D | A | 0.0000 | |
| 83 | F | A | -0.5951 | |
| 84 | A | A | 0.0000 | |
| 85 | T | A | -1.0180 | |
| 86 | Y | A | 0.0000 | |
| 87 | Y | A | 0.0000 | |
| 88 | C | A | 0.0000 | |
| 89 | Q | A | 0.0000 | |
| 90 | Q | A | 0.0000 | |
| 91 | L | A | 0.9036 | |
| 92 | N | A | -0.0301 | |
| 93 | S | A | 0.0782 | |
| 94 | Y | A | 0.8624 | |
| 95 | P | A | -0.0951 | |
| 96 | L | A | 0.0000 | |
| 97 | T | A | -0.5774 | |
| 98 | F | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | G | A | -1.2578 | |
| 101 | G | A | 0.0000 | |
| 102 | T | A | 0.0000 | |
| 103 | K | A | -1.9666 | |
| 104 | V | A | 0.0000 | |
| 105 | E | A | -1.7323 | |
| 106 | I | A | -0.1786 | |
| 107 | K | A | -1.6589 | |
| 108 | G | A | -1.5589 | |
| 109 | G | A | -1.4369 | |
| 110 | G | A | -1.2910 | |
| 111 | G | A | -1.2823 | |
| 112 | S | A | -1.0284 | |
| 113 | G | A | -1.1035 | |
| 114 | G | A | -1.1837 | |
| 115 | G | A | -1.2006 | |
| 116 | G | A | -1.1279 | |
| 117 | S | A | -0.9265 | |
| 118 | G | A | -1.0189 | |
| 119 | G | A | -1.1787 | |
| 120 | G | A | -1.1200 | |
| 121 | G | A | -1.0100 | |
| 122 | S | A | -0.9689 | |
| 123 | G | A | -1.0551 | |
| 124 | G | A | -1.2942 | |
| 125 | G | A | -1.2873 | |
| 126 | G | A | -1.2509 | |
| 127 | S | A | -1.1839 | |
| 128 | Q | A | -1.4761 | |
| 129 | V | A | -0.2971 | |
| 130 | Q | A | -0.6779 | |
| 131 | L | A | 0.0000 | |
| 132 | V | A | 0.6788 | |
| 133 | E | A | 0.0000 | |
| 134 | S | A | -0.4693 | |
| 135 | G | A | -0.9639 | |
| 136 | G | A | -0.3632 | |
| 137 | G | A | 0.3238 | |
| 138 | V | A | 1.3362 | |
| 139 | V | A | 0.0000 | |
| 140 | Q | A | -1.8393 | |
| 141 | P | A | -2.1146 | |
| 142 | G | A | -2.0944 | |
| 143 | R | A | -2.7623 | |
| 144 | S | A | -2.0533 | |
| 145 | L | A | -1.2955 | |
| 146 | R | A | -1.9648 | |
| 147 | L | A | 0.0000 | |
| 148 | S | A | -0.4243 | |
| 149 | C | A | 0.0000 | |
| 150 | A | A | -0.2146 | |
| 151 | A | A | 0.0000 | |
| 152 | S | A | -0.6510 | |
| 153 | G | A | -0.6239 | |
| 154 | F | A | -0.2522 | |
| 155 | T | A | -0.3930 | |
| 156 | F | A | 0.0000 | |
| 157 | S | A | -0.9483 | |
| 158 | N | A | -1.0718 | |
| 159 | Y | A | 0.1851 | |
| 160 | G | A | -0.0096 | |
| 161 | M | A | 0.0000 | |
| 162 | H | A | 0.0000 | |
| 163 | W | A | 0.0000 | |
| 164 | V | A | 0.0000 | |
| 165 | R | A | 0.0000 | |
| 166 | Q | A | -0.7719 | |
| 167 | A | A | -1.2024 | |
| 168 | P | A | -1.1668 | |
| 169 | G | A | -1.4531 | |
| 170 | K | A | -2.2594 | |
| 171 | G | A | -1.4140 | |
| 172 | L | A | 0.0000 | |
| 173 | E | A | -0.9232 | |
| 174 | W | A | 0.0000 | |
| 175 | V | A | 0.0000 | |
| 176 | A | A | 0.0000 | |
| 177 | V | A | 0.0000 | |
| 178 | I | A | 0.0000 | |
| 179 | S | A | -0.7578 | |
| 180 | Y | A | -0.2580 | |
| 181 | D | A | -1.8465 | |
| 182 | G | A | -1.4273 | |
| 183 | S | A | -1.3832 | |
| 184 | N | A | -1.7583 | |
| 185 | K | A | -1.2110 | |
| 186 | Y | A | -0.1773 | |
| 187 | Y | A | -0.5994 | |
| 188 | A | A | 0.0000 | |
| 189 | D | A | -2.4163 | |
| 190 | S | A | -1.7292 | |
| 191 | V | A | 0.0000 | |
| 192 | K | A | -2.5329 | |
| 193 | G | A | -1.7703 | |
| 194 | R | A | -1.5287 | |
| 195 | F | A | 0.0000 | |
| 196 | T | A | -0.8641 | |
| 197 | I | A | 0.0000 | |
| 198 | S | A | -0.5065 | |
| 199 | R | A | -1.0533 | |
| 200 | D | A | -1.7717 | |
| 201 | N | A | -1.9455 | |
| 202 | S | A | -1.6171 | |
| 203 | K | A | -2.4000 | |
| 204 | N | A | -1.7679 | |
| 205 | T | A | -1.0612 | |
| 206 | L | A | 0.0000 | |
| 207 | Y | A | -0.5274 | |
| 208 | L | A | 0.0000 | |
| 209 | Q | A | -1.1304 | |
| 210 | M | A | 0.0000 | |
| 211 | N | A | -1.8918 | |
| 212 | S | A | -1.7655 | |
| 213 | L | A | 0.0000 | |
| 214 | R | A | -2.7485 | |
| 215 | A | A | -1.8121 | |
| 216 | E | A | -2.3312 | |
| 217 | D | A | 0.0000 | |
| 218 | T | A | -0.6560 | |
| 219 | A | A | 0.0000 | |
| 220 | V | A | 0.1376 | |
| 221 | Y | A | 0.0000 | |
| 222 | Y | A | 0.0000 | |
| 223 | C | A | 0.0000 | |
| 224 | A | A | 0.0000 | |
| 225 | R | A | 0.1652 | |
| 226 | G | A | 0.6386 | |
| 227 | V | A | 1.6388 | |
| 228 | L | A | 0.0000 | |
| 229 | D | A | -0.0832 | |
| 230 | V | A | 0.0449 | |
| 231 | W | A | -0.4661 | |
| 232 | G | A | 0.0000 | |
| 233 | Q | A | -1.4036 | |
| 234 | G | A | 0.0000 | |
| 235 | T | A | -0.1749 | |
| 236 | T | A | 0.1949 | |
| 237 | V | A | 0.0000 | |
| 238 | T | A | 0.0130 | |
| 239 | V | A | 0.0000 | |
| 240 | S | A | -0.6857 | |
| 241 | S | A | -0.6797 |