Project name: acre3

Status: done

Started: 2026-05-13 10:11:02
Settings
Chain sequence(s) A: MKITNDTTTYYEVAELMGSEADELDGRIMMMGLLSRECVVDTDDLSEDQWLALIDESQKVRREQFESDEA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:00)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:01)
Show buried residues

Minimal score value
-3.4609
Maximal score value
0.8582
Average score
-1.4745
Total score value
-100.2671

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A -0.8788
2 K A -1.4374
3 I A -0.4179
4 T A -1.1883
5 N A -2.1158
6 D A -2.3903
7 T A -1.4491
8 T A -0.9945
9 T A -1.1139
10 Y A -0.2251
11 E A -0.8259
12 V A 0.0000
13 A A 0.0000
14 E A -1.4781
15 L A 0.0433
16 M A -0.2137
17 G A -1.0973
18 S A -1.5297
19 E A -2.3567
20 A A -1.6683
21 D A -2.2030
22 E A -2.1480
23 L A -1.4244
24 D A 0.0000
25 G A 0.0000
26 R A -2.2514
27 I A 0.0000
28 M A 0.0000
29 M A -1.0733
30 G A -1.4117
31 L A 0.0000
32 L A 0.0000
33 S A -0.9261
34 R A -2.3513
35 E A -1.5689
36 C A -0.0092
37 V A -0.1416
38 V A 0.8582
39 D A -0.8984
40 T A -1.3758
41 D A -2.8419
42 D A -2.8031
43 L A -2.2240
44 S A -2.4112
45 E A -3.0629
46 D A -2.6996
47 Q A -2.4034
48 W A -1.5126
49 L A -0.4564
50 A A -1.1059
51 L A 0.0000
52 I A -0.7136
53 D A -2.0496
54 E A -1.8812
55 S A 0.0000
56 Q A -2.6287
57 K A -3.4323
58 V A -2.2503
59 R A -2.4488
60 R A -3.4209
61 E A -3.4609
62 Q A -2.6558
63 F A -1.5208
64 E A -3.3171
65 S A -2.9353
66 D A -3.1654
67 E A -2.9822
68 A A -1.6208
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Laboratory of Theory of Biopolymers 2018