| Chain sequence(s) |
A: SFSEPLTVVGVMLTVASGMVRHTSQEALCALVAGAFLLLMMVLGTRKMQLTAEWCGEVEWNPDLVNEGGEVNLKVRQDAMGNLHLTEVEKEERAMALWLLAGLVASAFHWAGILIVLAVWTLFEMLGSGRR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:09)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:09)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:09)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:09)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:09)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:43)
[INFO] Main: Simulation completed successfully. (00:01:44)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | S | A | 0.4786 | |
| 2 | F | A | 1.7040 | |
| 3 | S | A | 0.4006 | |
| 4 | E | A | 0.1618 | |
| 5 | P | A | 0.9261 | |
| 6 | L | A | 2.1529 | |
| 7 | T | A | 2.0457 | |
| 8 | V | A | 2.8741 | |
| 9 | V | A | 3.3448 | |
| 10 | G | A | 2.7144 | |
| 11 | V | A | 3.3035 | |
| 12 | M | A | 3.4310 | |
| 13 | L | A | 3.2252 | |
| 14 | T | A | 2.2726 | |
| 15 | V | A | 2.7184 | |
| 16 | A | A | 1.8887 | |
| 17 | S | A | 0.8983 | |
| 18 | G | A | 0.4378 | |
| 19 | M | A | 0.5335 | |
| 20 | V | A | -0.0180 | |
| 21 | R | A | -1.8230 | |
| 22 | H | A | -1.6586 | |
| 23 | T | A | -1.2005 | |
| 24 | S | A | -1.5902 | |
| 25 | Q | A | -1.8979 | |
| 26 | E | A | -1.9279 | |
| 27 | A | A | -0.4347 | |
| 28 | L | A | 0.1197 | |
| 29 | C | A | 0.3839 | |
| 30 | A | A | 0.8096 | |
| 31 | L | A | 1.7344 | |
| 32 | V | A | 2.6628 | |
| 33 | A | A | 2.0330 | |
| 34 | G | A | 1.7423 | |
| 35 | A | A | 2.4733 | |
| 36 | F | A | 3.1613 | |
| 37 | L | A | 2.7450 | |
| 38 | L | A | 3.3540 | |
| 39 | L | A | 3.2411 | |
| 40 | M | A | 2.4636 | |
| 41 | M | A | 2.0905 | |
| 42 | V | A | 1.4766 | |
| 43 | L | A | 0.8129 | |
| 44 | G | A | -0.1402 | |
| 45 | T | A | -0.8033 | |
| 46 | R | A | -2.1010 | |
| 47 | K | A | -2.0468 | |
| 48 | M | A | -0.5188 | |
| 49 | Q | A | -1.0703 | |
| 50 | L | A | 0.4121 | |
| 51 | T | A | 0.0628 | |
| 52 | A | A | -0.1542 | |
| 53 | E | A | -0.8825 | |
| 54 | W | A | 0.4811 | |
| 55 | C | A | 0.3955 | |
| 56 | G | A | -0.6292 | |
| 57 | E | A | -1.2438 | |
| 58 | V | A | 0.3066 | |
| 59 | E | A | -1.1929 | |
| 60 | W | A | 0.2829 | |
| 61 | N | A | -0.4881 | |
| 62 | P | A | -0.6526 | |
| 63 | D | A | -1.3875 | |
| 64 | L | A | -0.0314 | |
| 65 | V | A | 0.4484 | |
| 66 | N | A | -1.6625 | |
| 67 | E | A | -2.3039 | |
| 68 | G | A | -1.3953 | |
| 69 | G | A | -1.6732 | |
| 70 | E | A | -1.8522 | |
| 71 | V | A | 0.2767 | |
| 72 | N | A | -0.6004 | |
| 73 | L | A | 0.2672 | |
| 74 | K | A | -0.9966 | |
| 75 | V | A | -0.3599 | |
| 76 | R | A | -1.8925 | |
| 77 | Q | A | -1.8366 | |
| 78 | D | A | -1.5026 | |
| 79 | A | A | -0.4410 | |
| 80 | M | A | 0.2582 | |
| 81 | G | A | -0.9538 | |
| 82 | N | A | -1.2283 | |
| 83 | L | A | -0.1123 | |
| 84 | H | A | -0.9145 | |
| 85 | L | A | -0.3663 | |
| 86 | T | A | -1.6531 | |
| 87 | E | A | -2.8127 | |
| 88 | V | A | -2.2670 | |
| 89 | E | A | -3.2026 | |
| 90 | K | A | -4.2252 | |
| 91 | E | A | -4.1135 | |
| 92 | E | A | -3.8058 | |
| 93 | R | A | -3.1458 | |
| 94 | A | A | -1.4251 | |
| 95 | M | A | -0.4264 | |
| 96 | A | A | 0.1576 | |
| 97 | L | A | 1.8331 | |
| 98 | W | A | 2.2072 | |
| 99 | L | A | 2.4831 | |
| 100 | L | A | 3.3405 | |
| 101 | A | A | 2.4552 | |
| 102 | G | A | 0.0000 | |
| 103 | L | A | 3.3953 | |
| 104 | V | A | 2.6733 | |
| 105 | A | A | 2.4294 | |
| 106 | S | A | 2.2593 | |
| 107 | A | A | 1.6987 | |
| 108 | F | A | 2.1689 | |
| 109 | H | A | 0.8387 | |
| 110 | W | A | 1.7851 | |
| 111 | A | A | 1.6244 | |
| 112 | G | A | 2.2195 | |
| 113 | I | A | 2.7746 | |
| 114 | L | A | 3.0671 | |
| 115 | I | A | 3.4111 | |
| 116 | V | A | 2.6647 | |
| 117 | L | A | 2.4346 | |
| 118 | A | A | 2.1653 | |
| 119 | V | A | 2.4596 | |
| 120 | W | A | 2.1100 | |
| 121 | T | A | 1.3851 | |
| 122 | L | A | 2.1219 | |
| 123 | F | A | 2.1516 | |
| 124 | E | A | 0.0063 | |
| 125 | M | A | 1.0432 | |
| 126 | L | A | 0.8706 | |
| 127 | G | A | -0.7928 | |
| 128 | S | A | -1.3750 | |
| 129 | G | A | -1.8579 | |
| 130 | R | A | -2.8692 | |
| 131 | R | A | -2.9768 |