Project name: KFDV_NS2B

Status: done

Started: 2026-05-19 18:33:45
Settings
Chain sequence(s) A: SFSEPLTVVGVMLTVASGMVRHTSQEALCALVAGAFLLLMMVLGTRKMQLTAEWCGEVEWNPDLVNEGGEVNLKVRQDAMGNLHLTEVEKEERAMALWLLAGLVASAFHWAGILIVLAVWTLFEMLGSGRR
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:09)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:09)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:09)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:09)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:43)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:44)
Show buried residues

Minimal score value
-4.2252
Maximal score value
3.431
Average score
0.3917
Total score value
51.3083

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 S A 0.4786
2 F A 1.7040
3 S A 0.4006
4 E A 0.1618
5 P A 0.9261
6 L A 2.1529
7 T A 2.0457
8 V A 2.8741
9 V A 3.3448
10 G A 2.7144
11 V A 3.3035
12 M A 3.4310
13 L A 3.2252
14 T A 2.2726
15 V A 2.7184
16 A A 1.8887
17 S A 0.8983
18 G A 0.4378
19 M A 0.5335
20 V A -0.0180
21 R A -1.8230
22 H A -1.6586
23 T A -1.2005
24 S A -1.5902
25 Q A -1.8979
26 E A -1.9279
27 A A -0.4347
28 L A 0.1197
29 C A 0.3839
30 A A 0.8096
31 L A 1.7344
32 V A 2.6628
33 A A 2.0330
34 G A 1.7423
35 A A 2.4733
36 F A 3.1613
37 L A 2.7450
38 L A 3.3540
39 L A 3.2411
40 M A 2.4636
41 M A 2.0905
42 V A 1.4766
43 L A 0.8129
44 G A -0.1402
45 T A -0.8033
46 R A -2.1010
47 K A -2.0468
48 M A -0.5188
49 Q A -1.0703
50 L A 0.4121
51 T A 0.0628
52 A A -0.1542
53 E A -0.8825
54 W A 0.4811
55 C A 0.3955
56 G A -0.6292
57 E A -1.2438
58 V A 0.3066
59 E A -1.1929
60 W A 0.2829
61 N A -0.4881
62 P A -0.6526
63 D A -1.3875
64 L A -0.0314
65 V A 0.4484
66 N A -1.6625
67 E A -2.3039
68 G A -1.3953
69 G A -1.6732
70 E A -1.8522
71 V A 0.2767
72 N A -0.6004
73 L A 0.2672
74 K A -0.9966
75 V A -0.3599
76 R A -1.8925
77 Q A -1.8366
78 D A -1.5026
79 A A -0.4410
80 M A 0.2582
81 G A -0.9538
82 N A -1.2283
83 L A -0.1123
84 H A -0.9145
85 L A -0.3663
86 T A -1.6531
87 E A -2.8127
88 V A -2.2670
89 E A -3.2026
90 K A -4.2252
91 E A -4.1135
92 E A -3.8058
93 R A -3.1458
94 A A -1.4251
95 M A -0.4264
96 A A 0.1576
97 L A 1.8331
98 W A 2.2072
99 L A 2.4831
100 L A 3.3405
101 A A 2.4552
102 G A 0.0000
103 L A 3.3953
104 V A 2.6733
105 A A 2.4294
106 S A 2.2593
107 A A 1.6987
108 F A 2.1689
109 H A 0.8387
110 W A 1.7851
111 A A 1.6244
112 G A 2.2195
113 I A 2.7746
114 L A 3.0671
115 I A 3.4111
116 V A 2.6647
117 L A 2.4346
118 A A 2.1653
119 V A 2.4596
120 W A 2.1100
121 T A 1.3851
122 L A 2.1219
123 F A 2.1516
124 E A 0.0063
125 M A 1.0432
126 L A 0.8706
127 G A -0.7928
128 S A -1.3750
129 G A -1.8579
130 R A -2.8692
131 R A -2.9768
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Laboratory of Theory of Biopolymers 2018