| Chain sequence(s) |
H: EVKLVESGGGLVQPGGSLRLSCATSGFTFIDYYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVRGRFTISRDDSQSILYLQMNTLRPEDSATYYCARGGTYFDVWGAGTTVTVSS
L: DIVLTQSPASLAVSLVQRATISCRASESVNNYDNGFIHWYQQKPGQPPKLLISRASNLKSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGTKLEIK input PDB |
| Selected Chain(s) | H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:04:20)
[INFO] Main: Simulation completed successfully. (00:04:22)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | E | H | -1.7251 | |
| 2 | V | H | -0.4961 | |
| 3 | K | H | -0.6166 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 1.3360 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.2905 | |
| 8 | G | H | -1.0699 | |
| 9 | G | H | -0.4442 | |
| 11 | G | H | 0.3171 | |
| 12 | L | H | 1.2897 | |
| 13 | V | H | 0.0885 | |
| 14 | Q | H | -1.2648 | |
| 15 | P | H | -1.4149 | |
| 16 | G | H | -1.2746 | |
| 17 | G | H | -0.9902 | |
| 18 | S | H | -1.2010 | |
| 19 | L | H | -1.0150 | |
| 20 | R | H | -2.2640 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3914 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | 0.2344 | |
| 25 | T | H | 0.0000 | |
| 26 | S | H | -0.5375 | |
| 27 | G | H | -0.7826 | |
| 28 | F | H | -0.2558 | |
| 29 | T | H | -0.3217 | |
| 30 | F | H | 0.0000 | |
| 35 | I | H | -0.5267 | |
| 36 | D | H | -1.7451 | |
| 37 | Y | H | -0.6390 | |
| 38 | Y | H | -0.4505 | |
| 39 | M | H | 0.0000 | |
| 40 | S | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | V | H | 0.0000 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.0761 | |
| 45 | P | H | 0.0000 | |
| 46 | P | H | -1.2605 | |
| 47 | G | H | -1.4308 | |
| 48 | K | H | -2.1955 | |
| 49 | A | H | -1.2397 | |
| 50 | L | H | 0.0000 | |
| 51 | E | H | -0.6807 | |
| 52 | W | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | F | H | -0.3649 | |
| 56 | I | H | 0.0000 | |
| 57 | R | H | -1.3319 | |
| 58 | N | H | -1.4584 | |
| 59 | K | H | -1.8756 | |
| 60 | A | H | -1.2954 | |
| 61 | N | H | -1.5350 | |
| 62 | G | H | -1.0410 | |
| 63 | Y | H | -0.2827 | |
| 64 | T | H | -0.6309 | |
| 65 | T | H | -0.8362 | |
| 66 | E | H | -2.1792 | |
| 67 | Y | H | -1.5612 | |
| 68 | S | H | 0.0000 | |
| 69 | A | H | -1.3177 | |
| 70 | S | H | -0.8936 | |
| 71 | V | H | 0.0000 | |
| 72 | R | H | -2.3166 | |
| 74 | G | H | -1.5150 | |
| 75 | R | H | -1.3606 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -1.1835 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.2532 | |
| 80 | R | H | -0.4615 | |
| 81 | D | H | -0.8824 | |
| 82 | D | H | -1.2282 | |
| 83 | S | H | -0.9810 | |
| 84 | Q | H | -1.4846 | |
| 85 | S | H | -0.6978 | |
| 86 | I | H | -0.1667 | |
| 87 | L | H | 0.0000 | |
| 88 | Y | H | -0.5897 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -1.6493 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.2998 | |
| 93 | T | H | -1.0401 | |
| 94 | L | H | 0.0000 | |
| 95 | R | H | -2.1536 | |
| 96 | P | H | -1.9013 | |
| 97 | E | H | -2.3323 | |
| 98 | D | H | 0.0000 | |
| 99 | S | H | -0.8005 | |
| 100 | A | H | 0.0000 | |
| 101 | T | H | -0.2078 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | 0.0000 | |
| 104 | C | H | 0.0000 | |
| 105 | A | H | 0.0000 | |
| 106 | R | H | -0.0031 | |
| 107 | G | H | 0.0000 | |
| 108 | G | H | -0.5100 | |
| 109 | T | H | -0.0977 | |
| 114 | Y | H | 0.2866 | |
| 115 | F | H | 0.0000 | |
| 116 | D | H | 0.0000 | |
| 117 | V | H | 0.1847 | |
| 118 | W | H | 0.0564 | |
| 119 | G | H | 0.0000 | |
| 120 | A | H | 0.0389 | |
| 121 | G | H | 0.0320 | |
| 122 | T | H | -0.0614 | |
| 123 | T | H | -0.0655 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1481 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.5818 | |
| 128 | S | H | -0.4437 | |
| 1 | D | L | -2.3141 | |
| 2 | I | L | 0.0000 | |
| 3 | V | L | 0.5634 | |
| 4 | L | L | 0.0000 | |
| 5 | T | L | -0.6280 | |
| 6 | Q | L | -0.6442 | |
| 7 | S | L | -0.7753 | |
| 8 | P | L | -0.4501 | |
| 9 | A | L | -0.5327 | |
| 10 | S | L | -0.8823 | |
| 11 | L | L | -0.6449 | |
| 12 | A | L | -0.6621 | |
| 13 | V | L | -0.5756 | |
| 14 | S | L | -0.6242 | |
| 15 | L | L | 0.3131 | |
| 16 | V | L | 0.6416 | |
| 17 | Q | L | -1.2486 | |
| 18 | R | L | -2.3352 | |
| 19 | A | L | 0.0000 | |
| 20 | T | L | -0.7159 | |
| 21 | I | L | 0.0000 | |
| 22 | S | L | -0.9126 | |
| 23 | C | L | 0.0000 | |
| 24 | R | L | -2.7130 | |
| 25 | A | L | 0.0000 | |
| 26 | S | L | -1.3845 | |
| 27 | E | L | -2.6517 | |
| 28 | S | L | -2.5914 | |
| 29 | V | L | 0.0000 | |
| 30 | N | L | -2.7545 | |
| 31 | N | L | -1.4819 | |
| 34 | Y | L | -0.2421 | |
| 35 | D | L | -1.8852 | |
| 36 | N | L | -2.3250 | |
| 37 | G | L | -1.9067 | |
| 38 | F | L | -0.9289 | |
| 39 | I | L | 0.0000 | |
| 40 | H | L | 0.0000 | |
| 41 | W | L | 0.0000 | |
| 42 | Y | L | 0.0000 | |
| 43 | Q | L | 0.0000 | |
| 44 | Q | L | 0.0000 | |
| 45 | K | L | -1.4749 | |
| 46 | P | L | -0.8681 | |
| 47 | G | L | -1.1630 | |
| 48 | Q | L | -1.6509 | |
| 49 | P | L | -1.0475 | |
| 50 | P | L | 0.0000 | |
| 51 | K | L | -1.7213 | |
| 52 | L | L | 0.0000 | |
| 53 | L | L | 0.0000 | |
| 54 | I | L | 0.0000 | |
| 55 | S | L | 0.0000 | |
| 56 | R | L | -1.4224 | |
| 57 | A | L | -1.0417 | |
| 65 | S | L | -1.0698 | |
| 66 | N | L | -1.4035 | |
| 67 | L | L | -0.2802 | |
| 68 | K | L | -0.6661 | |
| 69 | S | L | -0.5820 | |
| 70 | G | L | -0.7357 | |
| 71 | I | L | 0.0000 | |
| 72 | P | L | -0.3478 | |
| 74 | A | L | -0.2494 | |
| 75 | R | L | -1.0707 | |
| 76 | F | L | 0.0000 | |
| 77 | S | L | -0.5150 | |
| 78 | G | L | -0.6188 | |
| 79 | S | L | -0.9818 | |
| 80 | G | L | -1.8435 | |
| 83 | S | L | -2.2472 | |
| 84 | R | L | -3.5129 | |
| 85 | T | L | 0.0000 | |
| 86 | D | L | -2.8636 | |
| 87 | F | L | 0.0000 | |
| 88 | T | L | -0.8655 | |
| 89 | L | L | 0.0000 | |
| 90 | T | L | -0.7965 | |
| 91 | I | L | 0.0000 | |
| 92 | N | L | -1.8501 | |
| 93 | P | L | -1.3262 | |
| 94 | V | L | 0.0000 | |
| 95 | E | L | -1.6583 | |
| 96 | A | L | -1.0702 | |
| 97 | D | L | -1.9505 | |
| 98 | D | L | 0.0000 | |
| 99 | V | L | -0.6477 | |
| 100 | A | L | 0.0000 | |
| 101 | T | L | -0.8065 | |
| 102 | Y | L | 0.0000 | |
| 103 | Y | L | 0.0000 | |
| 104 | C | L | 0.0000 | |
| 105 | Q | L | 0.0000 | |
| 106 | Q | L | 0.0000 | |
| 107 | S | L | -0.5584 | |
| 108 | N | L | -1.6952 | |
| 109 | E | L | -2.5684 | |
| 114 | D | L | -3.0676 | |
| 115 | P | L | -2.1868 | |
| 116 | Y | L | -1.1396 | |
| 117 | T | L | -0.6292 | |
| 118 | F | L | 0.0573 | |
| 119 | G | L | 0.0000 | |
| 120 | G | L | -0.6804 | |
| 121 | G | L | -0.9393 | |
| 122 | T | L | 0.0000 | |
| 123 | K | L | -1.5817 | |
| 124 | L | L | 0.0000 | |
| 125 | E | L | -1.2010 | |
| 126 | I | L | -0.7034 | |
| 127 | K | L | -1.2539 |