Project name: rst

Status: done

Started: 2026-06-26 16:48:59
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Chain sequence(s) H: EVKLVESGGGLVQPGGSLRLSCATSGFTFIDYYMSWVRQPPGKALEWLAFIRNKANGYTTEYSASVRGRFTISRDDSQSILYLQMNTLRPEDSATYYCARGGTYFDVWGAGTTVTVSS
L: DIVLTQSPASLAVSLVQRATISCRASESVNNYDNGFIHWYQQKPGQPPKLLISRASNLKSGIPARFSGSGSRTDFTLTINPVEADDVATYYCQQSNEDPYTFGGGTKLEIK
input PDB
Selected Chain(s) H,L
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:03)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:03)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:03)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:03)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:03)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:04:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:04:22)
Show buried residues

Minimal score value
-3.5129
Maximal score value
1.336
Average score
-0.6923
Total score value
-158.5462

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 E H -1.7251
2 V H -0.4961
3 K H -0.6166
4 L H 0.0000
5 V H 1.3360
6 E H 0.0000
7 S H -0.2905
8 G H -1.0699
9 G H -0.4442
11 G H 0.3171
12 L H 1.2897
13 V H 0.0885
14 Q H -1.2648
15 P H -1.4149
16 G H -1.2746
17 G H -0.9902
18 S H -1.2010
19 L H -1.0150
20 R H -2.2640
21 L H 0.0000
22 S H -0.3914
23 C H 0.0000
24 A H 0.2344
25 T H 0.0000
26 S H -0.5375
27 G H -0.7826
28 F H -0.2558
29 T H -0.3217
30 F H 0.0000
35 I H -0.5267
36 D H -1.7451
37 Y H -0.6390
38 Y H -0.4505
39 M H 0.0000
40 S H 0.0000
41 W H 0.0000
42 V H 0.0000
43 R H 0.0000
44 Q H -1.0761
45 P H 0.0000
46 P H -1.2605
47 G H -1.4308
48 K H -2.1955
49 A H -1.2397
50 L H 0.0000
51 E H -0.6807
52 W H 0.0000
53 L H 0.0000
54 A H 0.0000
55 F H -0.3649
56 I H 0.0000
57 R H -1.3319
58 N H -1.4584
59 K H -1.8756
60 A H -1.2954
61 N H -1.5350
62 G H -1.0410
63 Y H -0.2827
64 T H -0.6309
65 T H -0.8362
66 E H -2.1792
67 Y H -1.5612
68 S H 0.0000
69 A H -1.3177
70 S H -0.8936
71 V H 0.0000
72 R H -2.3166
74 G H -1.5150
75 R H -1.3606
76 F H 0.0000
77 T H -1.1835
78 I H 0.0000
79 S H -0.2532
80 R H -0.4615
81 D H -0.8824
82 D H -1.2282
83 S H -0.9810
84 Q H -1.4846
85 S H -0.6978
86 I H -0.1667
87 L H 0.0000
88 Y H -0.5897
89 L H 0.0000
90 Q H -1.6493
91 M H 0.0000
92 N H -1.2998
93 T H -1.0401
94 L H 0.0000
95 R H -2.1536
96 P H -1.9013
97 E H -2.3323
98 D H 0.0000
99 S H -0.8005
100 A H 0.0000
101 T H -0.2078
102 Y H 0.0000
103 Y H 0.0000
104 C H 0.0000
105 A H 0.0000
106 R H -0.0031
107 G H 0.0000
108 G H -0.5100
109 T H -0.0977
114 Y H 0.2866
115 F H 0.0000
116 D H 0.0000
117 V H 0.1847
118 W H 0.0564
119 G H 0.0000
120 A H 0.0389
121 G H 0.0320
122 T H -0.0614
123 T H -0.0655
124 V H 0.0000
125 T H -0.1481
126 V H 0.0000
127 S H -0.5818
128 S H -0.4437
1 D L -2.3141
2 I L 0.0000
3 V L 0.5634
4 L L 0.0000
5 T L -0.6280
6 Q L -0.6442
7 S L -0.7753
8 P L -0.4501
9 A L -0.5327
10 S L -0.8823
11 L L -0.6449
12 A L -0.6621
13 V L -0.5756
14 S L -0.6242
15 L L 0.3131
16 V L 0.6416
17 Q L -1.2486
18 R L -2.3352
19 A L 0.0000
20 T L -0.7159
21 I L 0.0000
22 S L -0.9126
23 C L 0.0000
24 R L -2.7130
25 A L 0.0000
26 S L -1.3845
27 E L -2.6517
28 S L -2.5914
29 V L 0.0000
30 N L -2.7545
31 N L -1.4819
34 Y L -0.2421
35 D L -1.8852
36 N L -2.3250
37 G L -1.9067
38 F L -0.9289
39 I L 0.0000
40 H L 0.0000
41 W L 0.0000
42 Y L 0.0000
43 Q L 0.0000
44 Q L 0.0000
45 K L -1.4749
46 P L -0.8681
47 G L -1.1630
48 Q L -1.6509
49 P L -1.0475
50 P L 0.0000
51 K L -1.7213
52 L L 0.0000
53 L L 0.0000
54 I L 0.0000
55 S L 0.0000
56 R L -1.4224
57 A L -1.0417
65 S L -1.0698
66 N L -1.4035
67 L L -0.2802
68 K L -0.6661
69 S L -0.5820
70 G L -0.7357
71 I L 0.0000
72 P L -0.3478
74 A L -0.2494
75 R L -1.0707
76 F L 0.0000
77 S L -0.5150
78 G L -0.6188
79 S L -0.9818
80 G L -1.8435
83 S L -2.2472
84 R L -3.5129
85 T L 0.0000
86 D L -2.8636
87 F L 0.0000
88 T L -0.8655
89 L L 0.0000
90 T L -0.7965
91 I L 0.0000
92 N L -1.8501
93 P L -1.3262
94 V L 0.0000
95 E L -1.6583
96 A L -1.0702
97 D L -1.9505
98 D L 0.0000
99 V L -0.6477
100 A L 0.0000
101 T L -0.8065
102 Y L 0.0000
103 Y L 0.0000
104 C L 0.0000
105 Q L 0.0000
106 Q L 0.0000
107 S L -0.5584
108 N L -1.6952
109 E L -2.5684
114 D L -3.0676
115 P L -2.1868
116 Y L -1.1396
117 T L -0.6292
118 F L 0.0573
119 G L 0.0000
120 G L -0.6804
121 G L -0.9393
122 T L 0.0000
123 K L -1.5817
124 L L 0.0000
125 E L -1.2010
126 I L -0.7034
127 K L -1.2539
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Laboratory of Theory of Biopolymers 2018