| Chain sequence(s) |
A: FPFDLFPMCPFGCQCYSRVVHCSDLGLTSVPTNIPFDTRMLDLQNNKIKEIKENDFKGLTSLYGLILNNNKLTKIHPKAFLTTKKLRRLYLSHNQLSEIPLNLPKSLAELRIHENKVKKIQKDTFKGMNALHVLEMSANPLDNNGIEPGAFEGVTVFHIRIAEAKLTSVPKGLPPTLLELHLDYNKISTVELEDFKRYKELQRLGLGNNKITDIENGSLANIPRVREIHLENNKLKKIPSGLPELKYLQIIFLHSNSIARVGVNDFCPTVPKMKKSLYSAISLFNNPVKYWEMQPATFRCVLSRMSVQLGNFGM
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:33)
[INFO] Main: Simulation completed successfully. (00:05:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | F | A | 2.0759 | |
| 2 | P | A | 1.3576 | |
| 3 | F | A | 2.2434 | |
| 4 | D | A | 0.7534 | |
| 5 | L | A | 2.2638 | |
| 6 | F | A | 2.6242 | |
| 7 | P | A | 1.5038 | |
| 8 | M | A | 1.6733 | |
| 9 | C | A | 0.8844 | |
| 10 | P | A | 0.0000 | |
| 11 | F | A | 1.6231 | |
| 12 | G | A | 0.2112 | |
| 13 | C | A | 0.0000 | |
| 14 | Q | A | -0.6076 | |
| 15 | C | A | 0.0124 | |
| 16 | Y | A | 0.5636 | |
| 17 | S | A | -0.6458 | |
| 18 | R | A | -1.9020 | |
| 19 | V | A | -0.9409 | |
| 20 | V | A | 0.0000 | |
| 21 | H | A | -0.7153 | |
| 22 | C | A | 0.0000 | |
| 23 | S | A | -1.3304 | |
| 24 | D | A | -2.0620 | |
| 25 | L | A | -0.3775 | |
| 26 | G | A | -0.7963 | |
| 27 | L | A | -0.7888 | |
| 28 | T | A | -1.1916 | |
| 29 | S | A | -1.0276 | |
| 30 | V | A | 0.0000 | |
| 31 | P | A | 0.0000 | |
| 32 | T | A | -1.0520 | |
| 33 | N | A | -0.5004 | |
| 34 | I | A | 0.0585 | |
| 35 | P | A | 0.3223 | |
| 36 | F | A | 0.4651 | |
| 37 | D | A | -1.0690 | |
| 38 | T | A | 0.0000 | |
| 39 | R | A | -2.2743 | |
| 40 | M | A | -1.0444 | |
| 41 | L | A | 0.0000 | |
| 42 | D | A | 0.0000 | |
| 43 | L | A | 0.0000 | |
| 44 | Q | A | -1.4177 | |
| 45 | N | A | -2.0745 | |
| 46 | N | A | 0.0000 | |
| 47 | K | A | -2.6854 | |
| 48 | I | A | 0.0000 | |
| 49 | K | A | -3.6002 | |
| 50 | E | A | -3.2528 | |
| 51 | I | A | 0.0000 | |
| 52 | K | A | -3.0035 | |
| 53 | E | A | -3.1346 | |
| 54 | N | A | -3.0313 | |
| 55 | D | A | -2.4013 | |
| 56 | F | A | 0.0000 | |
| 57 | K | A | -2.3160 | |
| 58 | G | A | -0.7593 | |
| 59 | L | A | 0.0000 | |
| 60 | T | A | -1.1572 | |
| 61 | S | A | -1.4967 | |
| 62 | L | A | 0.0000 | |
| 63 | Y | A | -1.5854 | |
| 64 | G | A | 0.0000 | |
| 65 | L | A | 0.0000 | |
| 66 | I | A | -0.2329 | |
| 67 | L | A | 0.0000 | |
| 68 | N | A | -1.3844 | |
| 69 | N | A | -2.2753 | |
| 70 | N | A | 0.0000 | |
| 71 | K | A | -3.4079 | |
| 72 | L | A | 0.0000 | |
| 73 | T | A | -2.6333 | |
| 74 | K | A | -3.0049 | |
| 75 | I | A | 0.0000 | |
| 76 | H | A | -1.8868 | |
| 77 | P | A | -0.7820 | |
| 78 | K | A | -1.7009 | |
| 79 | A | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | L | A | -0.2851 | |
| 82 | T | A | -1.0410 | |
| 83 | T | A | 0.0000 | |
| 84 | K | A | -2.6801 | |
| 85 | K | A | -3.2634 | |
| 86 | L | A | 0.0000 | |
| 87 | R | A | -2.1895 | |
| 88 | R | A | -1.4158 | |
| 89 | L | A | 0.0000 | |
| 90 | Y | A | -0.5774 | |
| 91 | L | A | 0.0000 | |
| 92 | S | A | -1.3240 | |
| 93 | H | A | -2.2224 | |
| 94 | N | A | 0.0000 | |
| 95 | Q | A | -2.7630 | |
| 96 | L | A | 0.0000 | |
| 97 | S | A | -2.5333 | |
| 98 | E | A | -2.9080 | |
| 99 | I | A | 0.0000 | |
| 100 | P | A | 0.0000 | |
| 101 | L | A | 0.6666 | |
| 102 | N | A | -0.4581 | |
| 103 | L | A | 0.0000 | |
| 104 | P | A | 0.0000 | |
| 105 | K | A | -3.0095 | |
| 106 | S | A | -2.3502 | |
| 107 | L | A | 0.0000 | |
| 108 | A | A | -1.0869 | |
| 109 | E | A | 0.0000 | |
| 110 | L | A | 0.0000 | |
| 111 | R | A | -1.1869 | |
| 112 | I | A | 0.0000 | |
| 113 | H | A | -1.5781 | |
| 114 | E | A | -2.1185 | |
| 115 | N | A | 0.0000 | |
| 116 | K | A | -2.9460 | |
| 117 | V | A | 0.0000 | |
| 118 | K | A | -3.2281 | |
| 119 | K | A | -3.0166 | |
| 120 | I | A | 0.0000 | |
| 121 | Q | A | -2.8231 | |
| 122 | K | A | -3.5018 | |
| 123 | D | A | -3.7948 | |
| 124 | T | A | -2.3310 | |
| 125 | F | A | 0.0000 | |
| 126 | K | A | -3.3504 | |
| 127 | G | A | -2.2854 | |
| 128 | M | A | 0.0000 | |
| 129 | N | A | -2.0814 | |
| 130 | A | A | -1.2854 | |
| 131 | L | A | 0.0000 | |
| 132 | H | A | -0.2579 | |
| 133 | V | A | -0.1285 | |
| 134 | L | A | 0.0000 | |
| 135 | E | A | 0.0000 | |
| 136 | M | A | 0.0000 | |
| 137 | S | A | 0.0000 | |
| 138 | A | A | -1.4643 | |
| 139 | N | A | 0.0000 | |
| 140 | P | A | -1.9928 | |
| 141 | L | A | 0.0000 | |
| 142 | D | A | -2.5928 | |
| 143 | N | A | -2.0913 | |
| 144 | N | A | -2.2020 | |
| 145 | G | A | 0.0000 | |
| 146 | I | A | -1.7584 | |
| 147 | E | A | -1.8401 | |
| 148 | P | A | -1.7761 | |
| 149 | G | A | -2.3878 | |
| 150 | A | A | 0.0000 | |
| 151 | F | A | 0.0000 | |
| 152 | E | A | -3.1425 | |
| 153 | G | A | -2.2043 | |
| 154 | V | A | 0.0000 | |
| 155 | T | A | -0.9211 | |
| 156 | V | A | 0.0000 | |
| 157 | F | A | 0.4780 | |
| 158 | H | A | -0.0879 | |
| 159 | I | A | 0.0000 | |
| 160 | R | A | -1.0780 | |
| 161 | I | A | 0.0000 | |
| 162 | A | A | 0.0000 | |
| 163 | E | A | -1.8918 | |
| 164 | A | A | 0.0000 | |
| 165 | K | A | -2.6697 | |
| 166 | L | A | 0.0000 | |
| 167 | T | A | -1.6123 | |
| 168 | S | A | -1.2014 | |
| 169 | V | A | 0.0000 | |
| 170 | P | A | 0.0000 | |
| 171 | K | A | -2.1505 | |
| 172 | G | A | -1.4769 | |
| 173 | L | A | 0.0000 | |
| 174 | P | A | 0.0000 | |
| 175 | P | A | -1.2544 | |
| 176 | T | A | -0.3925 | |
| 177 | L | A | 0.0000 | |
| 178 | L | A | -0.3052 | |
| 179 | E | A | -0.6240 | |
| 180 | L | A | 0.0000 | |
| 181 | H | A | -0.7038 | |
| 182 | L | A | 0.0000 | |
| 183 | D | A | -0.5918 | |
| 184 | Y | A | -0.4185 | |
| 185 | N | A | 0.0000 | |
| 186 | K | A | -2.4019 | |
| 187 | I | A | 0.0000 | |
| 188 | S | A | -1.6525 | |
| 189 | T | A | -1.6192 | |
| 190 | V | A | 0.0000 | |
| 191 | E | A | -2.6765 | |
| 192 | L | A | -1.7552 | |
| 193 | E | A | -2.8839 | |
| 194 | D | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -2.7909 | |
| 197 | R | A | -2.5127 | |
| 198 | Y | A | 0.0000 | |
| 199 | K | A | -2.0448 | |
| 200 | E | A | -1.7967 | |
| 201 | L | A | 0.0000 | |
| 202 | Q | A | -1.3658 | |
| 203 | R | A | -1.2081 | |
| 204 | L | A | 0.0000 | |
| 205 | G | A | 0.0000 | |
| 206 | L | A | 0.0000 | |
| 207 | G | A | 0.0000 | |
| 208 | N | A | -1.2623 | |
| 209 | N | A | 0.0000 | |
| 210 | K | A | -2.3211 | |
| 211 | I | A | 0.0000 | |
| 212 | T | A | -2.1873 | |
| 213 | D | A | -2.9807 | |
| 214 | I | A | 0.0000 | |
| 215 | E | A | -2.5874 | |
| 216 | N | A | -2.1685 | |
| 217 | G | A | -1.4170 | |
| 218 | S | A | 0.0000 | |
| 219 | L | A | 0.0000 | |
| 220 | A | A | -1.0013 | |
| 221 | N | A | -1.4908 | |
| 222 | I | A | 0.0000 | |
| 223 | P | A | -1.4689 | |
| 224 | R | A | -1.7527 | |
| 225 | V | A | 0.0000 | |
| 226 | R | A | -1.2152 | |
| 227 | E | A | -0.8015 | |
| 228 | I | A | 0.0000 | |
| 229 | H | A | -0.3579 | |
| 230 | L | A | 0.0000 | |
| 231 | E | A | -1.0851 | |
| 232 | N | A | -1.8206 | |
| 233 | N | A | 0.0000 | |
| 234 | K | A | -2.9932 | |
| 235 | L | A | 0.0000 | |
| 236 | K | A | -3.3781 | |
| 237 | K | A | -3.0881 | |
| 238 | I | A | 0.0000 | |
| 239 | P | A | 0.0000 | |
| 240 | S | A | -1.3473 | |
| 241 | G | A | -1.2747 | |
| 242 | L | A | 0.0000 | |
| 243 | P | A | -1.2249 | |
| 244 | E | A | -2.3472 | |
| 245 | L | A | 0.0000 | |
| 246 | K | A | -2.0368 | |
| 247 | Y | A | -0.9532 | |
| 248 | L | A | 0.0000 | |
| 249 | Q | A | -0.0667 | |
| 250 | I | A | 0.1137 | |
| 251 | I | A | 0.0000 | |
| 252 | F | A | 0.1388 | |
| 253 | L | A | 0.0000 | |
| 254 | H | A | -0.7615 | |
| 255 | S | A | -1.2692 | |
| 256 | N | A | -2.0103 | |
| 257 | S | A | -2.2063 | |
| 258 | I | A | 0.0000 | |
| 259 | A | A | -1.9725 | |
| 260 | R | A | -2.7716 | |
| 261 | V | A | -1.4982 | |
| 262 | G | A | -1.1262 | |
| 263 | V | A | -0.4116 | |
| 264 | N | A | -1.1323 | |
| 265 | D | A | -0.9401 | |
| 266 | F | A | 0.0000 | |
| 267 | C | A | 0.0000 | |
| 268 | P | A | -0.8921 | |
| 269 | T | A | 0.1505 | |
| 270 | V | A | 1.0605 | |
| 271 | P | A | -0.3759 | |
| 272 | K | A | -1.7535 | |
| 273 | M | A | -1.4414 | |
| 274 | K | A | -2.2926 | |
| 275 | K | A | -1.6572 | |
| 276 | S | A | -0.0363 | |
| 277 | L | A | 1.0455 | |
| 278 | Y | A | 0.0000 | |
| 279 | S | A | 0.6362 | |
| 280 | A | A | 0.3015 | |
| 281 | I | A | 0.0000 | |
| 282 | S | A | 0.0000 | |
| 283 | L | A | 0.0000 | |
| 284 | F | A | -0.5199 | |
| 285 | N | A | -1.6830 | |
| 286 | N | A | -1.5040 | |
| 287 | P | A | -1.1274 | |
| 288 | V | A | 0.0000 | |
| 289 | K | A | -0.8015 | |
| 290 | Y | A | 0.7430 | |
| 291 | W | A | 0.7090 | |
| 292 | E | A | -0.9742 | |
| 293 | M | A | 0.0000 | |
| 294 | Q | A | -1.0404 | |
| 295 | P | A | -0.8460 | |
| 296 | A | A | -0.7756 | |
| 297 | T | A | 0.0000 | |
| 298 | F | A | -0.5438 | |
| 299 | R | A | -1.0467 | |
| 300 | C | A | 0.2539 | |
| 301 | V | A | 0.8107 | |
| 302 | L | A | 1.5302 | |
| 303 | S | A | 0.2264 | |
| 304 | R | A | -1.2338 | |
| 305 | M | A | 0.2784 | |
| 306 | S | A | 0.0000 | |
| 307 | V | A | -0.0631 | |
| 308 | Q | A | -0.6091 | |
| 309 | L | A | 0.1430 | |
| 310 | G | A | -0.5252 | |
| 311 | N | A | -0.4049 | |
| 312 | F | A | 1.2876 | |
| 313 | G | A | 0.5897 | |
| 314 | M | A | 0.9787 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine