| Chain sequence(s) |
A: YLPPTTPVAKVQSTDEYVYPTSLFCHAHTDRLLTVGHPFEDIVKNGKVVVPKVSGWQWRVFRLKFPDPNKFALPQKDFYDPEKERLVWRLRGLEIGRGGPLGKGTVGHPLFNKLGDTENPTAPQHDTADVRVAYSWDPKQTQLFIVGCEPPTGEHWDIAEPCPGLPPGACPPIQLVNSVIEDGDMCDIGFGNMNFKELQQDRSGVPLDIVSTRCKWPDFLKMTNEAYGDKMFFFGRREQVYARHFFRRAGPEGHPLPAAPPPSPLYTPPPPTSPYAVPPPTDYFGTPSGSLVSSDGQLFNRPFWLQRAQGNNNGVCWHNELFVTVVDNTRNTNFTISQQLCTPEPNVYDPSCFKNYLRHVEQFELSLIAQLCKVPLDPGVLAHINTMNPTILENWNLGFVPPKEREDPYKGLIFWEVDLTERFSQDLDQFALGRKFLYQ
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:02)
[INFO] Main: Simulation completed successfully. (00:00:08)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Y | A | 1.9498 | |
| 2 | L | A | 1.9736 | |
| 3 | P | A | 0.6520 | |
| 4 | P | A | 0.3486 | |
| 5 | T | A | 0.1083 | |
| 6 | T | A | 0.1253 | |
| 7 | P | A | 0.1652 | |
| 8 | V | A | 1.2189 | |
| 9 | A | A | 0.0201 | |
| 10 | K | A | -1.1711 | |
| 11 | V | A | -0.4265 | |
| 12 | Q | A | -1.5519 | |
| 13 | S | A | -1.6227 | |
| 14 | T | A | 0.0000 | |
| 15 | D | A | -2.4379 | |
| 16 | E | A | -2.4508 | |
| 17 | Y | A | 0.0000 | |
| 18 | V | A | 0.0000 | |
| 19 | Y | A | 0.4535 | |
| 20 | P | A | 0.1038 | |
| 21 | T | A | 0.1180 | |
| 22 | S | A | -0.1687 | |
| 23 | L | A | 0.0000 | |
| 24 | F | A | -0.0964 | |
| 25 | C | A | 0.0000 | |
| 26 | H | A | 0.0000 | |
| 27 | A | A | 0.0000 | |
| 28 | H | A | -1.1580 | |
| 29 | T | A | 0.0000 | |
| 30 | D | A | -2.7115 | |
| 31 | R | A | -2.5988 | |
| 32 | L | A | -0.7466 | |
| 33 | L | A | 1.2330 | |
| 34 | T | A | 1.6565 | |
| 35 | V | A | 2.0272 | |
| 36 | G | A | 0.0000 | |
| 37 | H | A | -0.2364 | |
| 38 | P | A | 0.0000 | |
| 39 | F | A | -0.6495 | |
| 40 | E | A | -1.7332 | |
| 41 | D | A | -0.9638 | |
| 42 | I | A | 0.8277 | |
| 43 | V | A | 1.0250 | |
| 44 | K | A | -1.1690 | |
| 45 | N | A | -1.9214 | |
| 46 | G | A | -1.2221 | |
| 47 | K | A | -0.9317 | |
| 48 | V | A | 1.4964 | |
| 49 | V | A | 2.0655 | |
| 50 | V | A | 1.2958 | |
| 51 | P | A | 0.4793 | |
| 52 | K | A | -0.6484 | |
| 53 | V | A | 0.0000 | |
| 54 | S | A | 0.0000 | |
| 55 | G | A | 0.0000 | |
| 56 | W | A | 0.0000 | |
| 57 | Q | A | 0.0000 | |
| 58 | W | A | 0.0000 | |
| 59 | R | A | 0.0000 | |
| 60 | V | A | 0.0000 | |
| 61 | F | A | 0.0000 | |
| 62 | R | A | 0.0000 | |
| 63 | L | A | 0.0000 | |
| 64 | K | A | -2.1074 | |
| 65 | F | A | 0.0000 | |
| 66 | P | A | 0.0000 | |
| 67 | D | A | -1.4647 | |
| 68 | P | A | 0.0000 | |
| 69 | N | A | -1.2650 | |
| 70 | K | A | -1.8091 | |
| 71 | F | A | -0.6627 | |
| 72 | A | A | -0.5659 | |
| 73 | L | A | -0.8551 | |
| 74 | P | A | -1.2531 | |
| 75 | Q | A | -2.4731 | |
| 76 | K | A | -3.0938 | |
| 77 | D | A | -2.9950 | |
| 78 | F | A | -1.6508 | |
| 79 | Y | A | -1.9400 | |
| 80 | D | A | -2.7799 | |
| 81 | P | A | -2.3577 | |
| 82 | E | A | -3.0733 | |
| 83 | K | A | -3.4453 | |
| 84 | E | A | -2.5121 | |
| 85 | R | A | -1.3169 | |
| 86 | L | A | 0.0000 | |
| 87 | V | A | 0.0000 | |
| 88 | W | A | 0.0000 | |
| 89 | R | A | 0.0000 | |
| 90 | L | A | 0.0000 | |
| 91 | R | A | -0.6348 | |
| 92 | G | A | 0.0000 | |
| 93 | L | A | 0.0000 | |
| 94 | E | A | -0.9830 | |
| 95 | I | A | 0.0000 | |
| 96 | G | A | -1.3271 | |
| 97 | R | A | 0.0000 | |
| 98 | G | A | -0.7369 | |
| 99 | G | A | -0.5344 | |
| 100 | P | A | -0.4190 | |
| 101 | L | A | 0.0114 | |
| 102 | G | A | -0.2917 | |
| 103 | K | A | -0.7809 | |
| 104 | G | A | 0.0000 | |
| 105 | T | A | -0.4737 | |
| 106 | V | A | 0.0000 | |
| 107 | G | A | 0.1478 | |
| 108 | H | A | 0.0000 | |
| 109 | P | A | 0.4427 | |
| 110 | L | A | 0.4319 | |
| 111 | F | A | 0.0000 | |
| 112 | N | A | -1.0028 | |
| 113 | K | A | -0.5040 | |
| 114 | L | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | D | A | -1.4557 | |
| 117 | T | A | -1.2891 | |
| 118 | E | A | -2.6612 | |
| 119 | N | A | -2.3793 | |
| 120 | P | A | -1.6865 | |
| 121 | T | A | -0.8984 | |
| 122 | A | A | -0.6688 | |
| 123 | P | A | -0.6287 | |
| 124 | Q | A | -1.6166 | |
| 125 | H | A | -1.8898 | |
| 126 | D | A | -2.6211 | |
| 127 | T | A | -1.7739 | |
| 128 | A | A | -1.2325 | |
| 129 | D | A | -2.0809 | |
| 130 | V | A | -1.4752 | |
| 131 | R | A | -0.8275 | |
| 132 | V | A | 0.3645 | |
| 133 | A | A | 0.4436 | |
| 134 | Y | A | 0.2635 | |
| 135 | S | A | -0.1427 | |
| 136 | W | A | 0.0000 | |
| 137 | D | A | -0.5387 | |
| 138 | P | A | 0.0000 | |
| 139 | K | A | 0.0000 | |
| 140 | Q | A | 0.0000 | |
| 141 | T | A | 0.0000 | |
| 142 | Q | A | 0.0000 | |
| 143 | L | A | 0.0000 | |
| 144 | F | A | 0.0000 | |
| 145 | I | A | 0.0000 | |
| 146 | V | A | 0.0000 | |
| 147 | G | A | 0.0000 | |
| 148 | C | A | 0.0000 | |
| 149 | E | A | -0.5638 | |
| 150 | P | A | 0.0000 | |
| 151 | P | A | 0.0000 | |
| 152 | T | A | 0.0000 | |
| 153 | G | A | 0.0000 | |
| 154 | E | A | -0.2350 | |
| 155 | H | A | 0.0000 | |
| 156 | W | A | 1.0852 | |
| 157 | D | A | 0.3190 | |
| 158 | I | A | 0.8191 | |
| 159 | A | A | 0.1014 | |
| 160 | E | A | -1.4809 | |
| 161 | P | A | -0.2400 | |
| 162 | C | A | 0.1782 | |
| 163 | P | A | -0.1743 | |
| 164 | G | A | -0.0783 | |
| 165 | L | A | 0.5830 | |
| 166 | P | A | -0.1140 | |
| 167 | P | A | -0.3392 | |
| 168 | G | A | -0.4163 | |
| 169 | A | A | -0.0145 | |
| 170 | C | A | 0.7568 | |
| 171 | P | A | 0.5506 | |
| 172 | P | A | 0.7773 | |
| 173 | I | A | 2.0210 | |
| 174 | Q | A | 0.8172 | |
| 175 | L | A | 1.4060 | |
| 176 | V | A | 0.8007 | |
| 177 | N | A | -0.3027 | |
| 178 | S | A | 0.0340 | |
| 179 | V | A | 0.4562 | |
| 180 | I | A | 0.0000 | |
| 181 | E | A | 0.3834 | |
| 182 | D | A | 0.0854 | |
| 183 | G | A | -0.1615 | |
| 184 | D | A | -0.5618 | |
| 185 | M | A | 0.0000 | |
| 186 | C | A | 0.0000 | |
| 187 | D | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | G | A | 0.1577 | |
| 190 | F | A | 0.0642 | |
| 191 | G | A | -0.1014 | |
| 192 | N | A | -0.2920 | |
| 193 | M | A | -0.1667 | |
| 194 | N | A | 0.0000 | |
| 195 | F | A | 0.0000 | |
| 196 | K | A | -3.4057 | |
| 197 | E | A | -2.6065 | |
| 198 | L | A | -1.1984 | |
| 199 | Q | A | -2.5228 | |
| 200 | Q | A | -3.3423 | |
| 201 | D | A | -3.5956 | |
| 202 | R | A | -3.3302 | |
| 203 | S | A | 0.0000 | |
| 204 | G | A | 0.0000 | |
| 205 | V | A | 0.0000 | |
| 206 | P | A | 0.0000 | |
| 207 | L | A | 0.2165 | |
| 208 | D | A | 0.0000 | |
| 209 | I | A | 0.0000 | |
| 210 | V | A | -1.3672 | |
| 211 | S | A | -1.9087 | |
| 212 | T | A | -1.4719 | |
| 213 | R | A | -2.1771 | |
| 214 | C | A | 0.0000 | |
| 215 | K | A | 0.0000 | |
| 216 | W | A | -0.1779 | |
| 217 | P | A | 0.0000 | |
| 218 | D | A | 0.0000 | |
| 219 | F | A | 0.3352 | |
| 220 | L | A | 0.5568 | |
| 221 | K | A | -1.2064 | |
| 222 | M | A | 0.0000 | |
| 223 | T | A | -0.9279 | |
| 224 | N | A | -1.5354 | |
| 225 | E | A | -1.2893 | |
| 226 | A | A | -0.6782 | |
| 227 | Y | A | -0.4537 | |
| 228 | G | A | 0.0000 | |
| 229 | D | A | 0.0000 | |
| 230 | K | A | -0.7004 | |
| 231 | M | A | 0.0000 | |
| 232 | F | A | 0.0000 | |
| 233 | F | A | -0.1446 | |
| 234 | F | A | -0.0038 | |
| 235 | G | A | -0.9044 | |
| 236 | R | A | -2.6328 | |
| 237 | R | A | -2.8474 | |
| 238 | E | A | -2.0706 | |
| 239 | Q | A | -0.1366 | |
| 240 | V | A | 1.4894 | |
| 241 | Y | A | 1.2517 | |
| 242 | A | A | 0.1955 | |
| 243 | R | A | -1.2513 | |
| 244 | H | A | -1.1260 | |
| 245 | F | A | -0.1817 | |
| 246 | F | A | 0.0000 | |
| 247 | R | A | 0.0000 | |
| 248 | R | A | -0.8131 | |
| 249 | A | A | -1.5431 | |
| 250 | G | A | -1.1970 | |
| 251 | P | A | -1.1271 | |
| 252 | E | A | -1.3056 | |
| 253 | G | A | -1.2455 | |
| 254 | H | A | -1.4479 | |
| 255 | P | A | -0.9726 | |
| 256 | L | A | 0.3799 | |
| 257 | P | A | 0.0026 | |
| 258 | A | A | 0.1541 | |
| 259 | A | A | 0.0340 | |
| 260 | P | A | -0.4946 | |
| 261 | P | A | -0.4069 | |
| 262 | P | A | -0.3158 | |
| 263 | S | A | 0.1035 | |
| 264 | P | A | 0.4080 | |
| 265 | L | A | 1.5305 | |
| 266 | Y | A | 0.8831 | |
| 267 | T | A | 0.1084 | |
| 268 | P | A | 0.1905 | |
| 269 | P | A | 0.1350 | |
| 270 | P | A | -0.3598 | |
| 271 | P | A | -0.0899 | |
| 272 | T | A | -0.2075 | |
| 273 | S | A | 0.2171 | |
| 274 | P | A | 0.2125 | |
| 275 | Y | A | 1.1112 | |
| 276 | A | A | 1.0483 | |
| 277 | V | A | 1.9123 | |
| 278 | P | A | 0.9665 | |
| 279 | P | A | -0.2629 | |
| 280 | P | A | -0.6280 | |
| 281 | T | A | -0.3515 | |
| 282 | D | A | -0.8260 | |
| 283 | Y | A | 0.9271 | |
| 284 | F | A | 0.7344 | |
| 285 | G | A | 0.1522 | |
| 286 | T | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | S | A | 0.0000 | |
| 289 | G | A | 0.0000 | |
| 290 | S | A | 0.9186 | |
| 291 | L | A | 1.6015 | |
| 292 | V | A | 0.6037 | |
| 293 | S | A | -0.1624 | |
| 294 | S | A | -0.9670 | |
| 295 | D | A | -1.8442 | |
| 296 | G | A | 0.0000 | |
| 297 | Q | A | 0.0000 | |
| 298 | L | A | -1.1281 | |
| 299 | F | A | 0.0000 | |
| 300 | N | A | -1.6545 | |
| 301 | R | A | -1.9269 | |
| 302 | P | A | -0.9906 | |
| 303 | F | A | -0.2411 | |
| 304 | W | A | -0.5151 | |
| 305 | L | A | 0.0000 | |
| 306 | Q | A | -2.0773 | |
| 307 | R | A | -2.9259 | |
| 308 | A | A | 0.0000 | |
| 309 | Q | A | -1.6600 | |
| 310 | G | A | -1.4336 | |
| 311 | N | A | -1.4184 | |
| 312 | N | A | 0.0000 | |
| 313 | N | A | 0.0000 | |
| 314 | G | A | 0.0000 | |
| 315 | V | A | 0.0000 | |
| 316 | C | A | 0.0000 | |
| 317 | W | A | 0.0000 | |
| 318 | H | A | -0.9178 | |
| 319 | N | A | -0.8827 | |
| 320 | E | A | -1.0468 | |
| 321 | L | A | 0.0000 | |
| 322 | F | A | 0.0000 | |
| 323 | V | A | 0.0000 | |
| 324 | T | A | 0.0000 | |
| 325 | V | A | 0.0000 | |
| 326 | V | A | 0.0000 | |
| 327 | D | A | 0.0000 | |
| 328 | N | A | 0.0000 | |
| 329 | T | A | 0.0000 | |
| 330 | R | A | -0.3728 | |
| 331 | N | A | 0.0000 | |
| 332 | T | A | -0.1985 | |
| 333 | N | A | 0.3782 | |
| 334 | F | A | 1.4341 | |
| 335 | T | A | 0.7144 | |
| 336 | I | A | 0.3836 | |
| 337 | S | A | -0.8438 | |
| 338 | Q | A | -1.4350 | |
| 339 | Q | A | -1.0842 | |
| 340 | L | A | 0.6039 | |
| 341 | C | A | -0.0127 | |
| 342 | T | A | -0.4353 | |
| 343 | P | A | -1.1867 | |
| 344 | E | A | -1.7483 | |
| 345 | P | A | -0.7425 | |
| 346 | N | A | -0.7520 | |
| 347 | V | A | 1.2887 | |
| 348 | Y | A | 1.2371 | |
| 349 | D | A | 0.0548 | |
| 350 | P | A | -0.3350 | |
| 351 | S | A | -0.2618 | |
| 352 | C | A | 0.0000 | |
| 353 | F | A | -0.5123 | |
| 354 | K | A | -1.6462 | |
| 355 | N | A | -1.6915 | |
| 356 | Y | A | -0.1278 | |
| 357 | L | A | 0.5467 | |
| 358 | R | A | 0.8927 | |
| 359 | H | A | 0.0000 | |
| 360 | V | A | 1.4723 | |
| 361 | E | A | 0.0000 | |
| 362 | Q | A | -0.0238 | |
| 363 | F | A | 0.0000 | |
| 364 | E | A | -1.9200 | |
| 365 | L | A | 0.0000 | |
| 366 | S | A | -0.6705 | |
| 367 | L | A | 0.0000 | |
| 368 | I | A | 0.0000 | |
| 369 | A | A | 0.0000 | |
| 370 | Q | A | 0.0000 | |
| 371 | L | A | 0.0000 | |
| 372 | C | A | 0.0000 | |
| 373 | K | A | -0.2792 | |
| 374 | V | A | 0.0000 | |
| 375 | P | A | -1.3283 | |
| 376 | L | A | -1.7511 | |
| 377 | D | A | -2.0302 | |
| 378 | P | A | -1.0616 | |
| 379 | G | A | -1.0243 | |
| 380 | V | A | -0.9390 | |
| 381 | L | A | -0.5464 | |
| 382 | A | A | -0.6661 | |
| 383 | H | A | -0.8558 | |
| 384 | I | A | 0.0000 | |
| 385 | N | A | -1.4139 | |
| 386 | T | A | -0.5863 | |
| 387 | M | A | -0.3405 | |
| 388 | N | A | -0.8769 | |
| 389 | P | A | -1.2832 | |
| 390 | T | A | -1.5497 | |
| 391 | I | A | 0.0000 | |
| 392 | L | A | -1.5397 | |
| 393 | E | A | -2.9281 | |
| 394 | N | A | -2.6811 | |
| 395 | W | A | -1.5318 | |
| 396 | N | A | -1.1857 | |
| 397 | L | A | -0.2101 | |
| 398 | G | A | 0.5261 | |
| 399 | F | A | 2.4213 | |
| 400 | V | A | 1.8578 | |
| 401 | P | A | 0.0644 | |
| 402 | P | A | -1.9477 | |
| 403 | K | A | -3.4312 | |
| 404 | E | A | -3.9128 | |
| 405 | R | A | -4.2451 | |
| 406 | E | A | -3.9124 | |
| 407 | D | A | -2.9248 | |
| 408 | P | A | -1.7907 | |
| 409 | Y | A | -0.9850 | |
| 410 | K | A | -2.1016 | |
| 411 | G | A | -0.6414 | |
| 412 | L | A | 0.6653 | |
| 413 | I | A | 1.5881 | |
| 414 | F | A | 0.0000 | |
| 415 | W | A | -0.3781 | |
| 416 | E | A | -1.6320 | |
| 417 | V | A | 0.0000 | |
| 418 | D | A | -2.8339 | |
| 419 | L | A | 0.0000 | |
| 420 | T | A | -1.8895 | |
| 421 | E | A | -2.5008 | |
| 422 | R | A | -2.0709 | |
| 423 | F | A | -1.0242 | |
| 424 | S | A | -1.3213 | |
| 425 | Q | A | -1.8508 | |
| 426 | D | A | -2.9022 | |
| 427 | L | A | -2.0116 | |
| 428 | D | A | -2.8196 | |
| 429 | Q | A | -2.6278 | |
| 430 | F | A | -1.4533 | |
| 431 | A | A | -0.8899 | |
| 432 | L | A | 0.0000 | |
| 433 | G | A | 0.0000 | |
| 434 | R | A | -1.6215 | |
| 435 | K | A | -0.7652 | |
| 436 | F | A | 0.1318 | |
| 437 | L | A | 1.0125 | |
| 438 | Y | A | 0.8097 | |
| 439 | Q | A | -0.2800 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine