| Chain sequence(s) |
A: VGVWGQDGNEEMGGITQTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYLRARVCENCMEMDVMSVA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:45)
[INFO] Main: Simulation completed successfully. (00:01:46)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | V | A | 2.1953 | |
| 2 | G | A | 1.5455 | |
| 3 | V | A | 2.3291 | |
| 4 | W | A | 1.4415 | |
| 5 | G | A | -0.5870 | |
| 6 | Q | A | -2.1689 | |
| 7 | D | A | -3.2908 | |
| 8 | G | A | -3.1094 | |
| 9 | N | A | -3.3967 | |
| 10 | E | A | -3.5586 | |
| 11 | E | A | -2.8706 | |
| 12 | M | A | -0.8106 | |
| 13 | G | A | -0.7905 | |
| 14 | G | A | 0.1463 | |
| 15 | I | A | 1.4729 | |
| 16 | T | A | 0.3277 | |
| 17 | Q | A | -0.4205 | |
| 18 | T | A | -0.6212 | |
| 19 | P | A | -0.6768 | |
| 20 | Y | A | -0.3146 | |
| 21 | K | A | -0.9752 | |
| 22 | V | A | 0.5306 | |
| 23 | S | A | 0.7890 | |
| 24 | I | A | 1.5120 | |
| 25 | S | A | 0.0743 | |
| 26 | G | A | -1.1987 | |
| 27 | T | A | -1.7280 | |
| 28 | T | A | -1.0068 | |
| 29 | V | A | 0.0000 | |
| 30 | I | A | 0.3894 | |
| 31 | L | A | 0.0000 | |
| 32 | T | A | -1.1122 | |
| 33 | C | A | 0.0000 | |
| 34 | P | A | -0.8247 | |
| 35 | Q | A | -0.7379 | |
| 36 | Y | A | -0.6764 | |
| 37 | P | A | -1.1024 | |
| 38 | G | A | -1.3838 | |
| 39 | S | A | -1.9917 | |
| 40 | E | A | -3.2527 | |
| 41 | I | A | 0.0000 | |
| 42 | L | A | -1.7238 | |
| 43 | W | A | 0.0000 | |
| 44 | Q | A | -1.7262 | |
| 45 | H | A | -1.4715 | |
| 46 | N | A | -2.0379 | |
| 47 | D | A | -3.4079 | |
| 48 | K | A | -3.3578 | |
| 49 | N | A | -2.9282 | |
| 50 | I | A | -2.0602 | |
| 51 | G | A | -2.2318 | |
| 52 | G | A | -2.5600 | |
| 53 | D | A | -4.1415 | |
| 54 | E | A | -4.4114 | |
| 55 | D | A | -4.3511 | |
| 56 | D | A | -4.0356 | |
| 57 | K | A | -3.7660 | |
| 58 | N | A | -2.8699 | |
| 59 | I | A | -2.3015 | |
| 60 | G | A | -2.0716 | |
| 61 | S | A | -2.0670 | |
| 62 | D | A | -3.3245 | |
| 63 | E | A | -3.6297 | |
| 64 | D | A | -2.6078 | |
| 65 | H | A | -1.8788 | |
| 66 | L | A | 0.0000 | |
| 67 | S | A | -0.8349 | |
| 68 | L | A | 0.0000 | |
| 69 | K | A | -2.9240 | |
| 70 | E | A | -2.9271 | |
| 71 | F | A | 0.0000 | |
| 72 | S | A | -1.7985 | |
| 73 | E | A | -1.9788 | |
| 74 | L | A | -0.3476 | |
| 75 | E | A | -1.4498 | |
| 76 | Q | A | -1.3822 | |
| 77 | S | A | -1.1556 | |
| 78 | G | A | 0.0000 | |
| 79 | Y | A | 0.6689 | |
| 80 | Y | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | C | A | 0.0000 | |
| 83 | Y | A | 0.0000 | |
| 84 | P | A | -1.9488 | |
| 85 | R | A | -2.8366 | |
| 86 | G | A | -2.0111 | |
| 87 | S | A | -2.3419 | |
| 88 | K | A | -3.3273 | |
| 89 | P | A | -3.3041 | |
| 90 | E | A | -3.7171 | |
| 91 | D | A | -3.5018 | |
| 92 | A | A | -2.1361 | |
| 93 | N | A | -1.5822 | |
| 94 | F | A | -0.0582 | |
| 95 | Y | A | 1.3196 | |
| 96 | L | A | 1.2768 | |
| 97 | Y | A | 1.2798 | |
| 98 | L | A | 0.0000 | |
| 99 | R | A | -1.8598 | |
| 100 | A | A | -1.4413 | |
| 101 | R | A | -1.9486 | |
| 102 | V | A | -1.5480 | |
| 103 | C | A | -1.7146 | |
| 104 | E | A | -2.3377 | |
| 105 | N | A | -1.8294 | |
| 106 | C | A | -0.7684 | |
| 107 | M | A | -0.1255 | |
| 108 | E | A | -1.0559 | |
| 109 | M | A | 0.4541 | |
| 110 | D | A | -0.5070 | |
| 111 | V | A | 1.7009 | |
| 112 | M | A | 2.0064 | |
| 113 | S | A | 1.5284 | |
| 114 | V | A | 2.3039 | |
| 115 | A | A | 1.0184 |