| Chain sequence(s) |
A: GKDLSIIGVLRIDESNPADIARLRAILAQIAERSLETHALATAAGYTVKWSGLVIYPKGKAPRWIALDKVPASKEELQALIDAAIAADFAAPPASAALPAALRAAIEAVADSVPSPSLLVFVEGELAKVVPGLPSPEALLAAL
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:30)
[INFO] Main: Simulation completed successfully. (00:01:31)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | G | A | -1.5731 | |
| 2 | K | A | -2.6553 | |
| 3 | D | A | -2.3889 | |
| 4 | L | A | 0.0000 | |
| 5 | S | A | 0.0000 | |
| 6 | I | A | 0.0000 | |
| 7 | I | A | 0.0000 | |
| 8 | G | A | 0.0000 | |
| 9 | V | A | 0.0000 | |
| 10 | L | A | 0.0000 | |
| 11 | R | A | -1.3721 | |
| 12 | I | A | 0.0000 | |
| 13 | D | A | -2.0424 | |
| 14 | E | A | -2.1112 | |
| 15 | S | A | -1.3919 | |
| 16 | N | A | -1.2522 | |
| 17 | P | A | -0.8149 | |
| 18 | A | A | -0.7063 | |
| 19 | D | A | -1.0688 | |
| 20 | I | A | -0.6452 | |
| 21 | A | A | -0.7643 | |
| 22 | R | A | -0.9678 | |
| 23 | L | A | 0.0000 | |
| 24 | R | A | -1.7593 | |
| 25 | A | A | -1.0023 | |
| 26 | I | A | 0.0000 | |
| 27 | L | A | 0.0000 | |
| 28 | A | A | -1.5654 | |
| 29 | Q | A | -1.4773 | |
| 30 | I | A | -1.0264 | |
| 31 | A | A | 0.0000 | |
| 32 | E | A | -2.8925 | |
| 33 | R | A | 0.0000 | |
| 34 | S | A | 0.0000 | |
| 35 | L | A | -1.2784 | |
| 36 | E | A | -1.9845 | |
| 37 | T | A | 0.0000 | |
| 38 | H | A | 0.0000 | |
| 39 | A | A | -0.0999 | |
| 40 | L | A | -0.2360 | |
| 41 | A | A | 0.0000 | |
| 42 | T | A | -0.2755 | |
| 43 | A | A | 0.1668 | |
| 44 | A | A | 0.1613 | |
| 45 | G | A | -0.6074 | |
| 46 | Y | A | -0.7284 | |
| 47 | T | A | -1.0358 | |
| 48 | V | A | -1.0121 | |
| 49 | K | A | -2.0261 | |
| 50 | W | A | 0.0000 | |
| 51 | S | A | -0.6524 | |
| 52 | G | A | -0.2450 | |
| 53 | L | A | 0.0000 | |
| 54 | V | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | Y | A | -1.3775 | |
| 57 | P | A | 0.0000 | |
| 58 | K | A | -2.9045 | |
| 59 | G | A | -2.2604 | |
| 60 | K | A | -2.6039 | |
| 61 | A | A | -1.1873 | |
| 62 | P | A | -1.0020 | |
| 63 | R | A | -0.7213 | |
| 64 | W | A | 0.0000 | |
| 65 | I | A | 0.0928 | |
| 66 | A | A | 0.0000 | |
| 67 | L | A | -0.9545 | |
| 68 | D | A | -2.1629 | |
| 69 | K | A | -2.1380 | |
| 70 | V | A | -0.4860 | |
| 71 | P | A | 0.0000 | |
| 72 | A | A | -0.8435 | |
| 73 | S | A | -2.0085 | |
| 74 | K | A | -3.2367 | |
| 75 | E | A | -3.4002 | |
| 76 | E | A | -2.7884 | |
| 77 | L | A | 0.0000 | |
| 78 | Q | A | -2.3425 | |
| 79 | A | A | -1.5198 | |
| 80 | L | A | -0.7493 | |
| 81 | I | A | 0.0000 | |
| 82 | D | A | -1.6589 | |
| 83 | A | A | -0.5755 | |
| 84 | A | A | -0.5680 | |
| 85 | I | A | -0.8001 | |
| 86 | A | A | -0.5897 | |
| 87 | A | A | -0.8466 | |
| 88 | D | A | -1.7444 | |
| 89 | F | A | 0.0000 | |
| 90 | A | A | -0.4767 | |
| 91 | A | A | -0.2070 | |
| 92 | P | A | -0.0837 | |
| 93 | P | A | -0.2906 | |
| 94 | A | A | -0.1810 | |
| 95 | S | A | -0.4325 | |
| 96 | A | A | -0.6325 | |
| 97 | A | A | -0.3304 | |
| 98 | L | A | 0.0000 | |
| 99 | P | A | -0.2520 | |
| 100 | A | A | -0.1099 | |
| 101 | A | A | -0.4517 | |
| 102 | L | A | 0.0000 | |
| 103 | R | A | -0.6902 | |
| 104 | A | A | -0.4741 | |
| 105 | A | A | -0.6143 | |
| 106 | I | A | 0.0000 | |
| 107 | E | A | -1.4789 | |
| 108 | A | A | -0.7537 | |
| 109 | V | A | -0.4785 | |
| 110 | A | A | 0.0000 | |
| 111 | D | A | -2.1020 | |
| 112 | S | A | -1.1503 | |
| 113 | V | A | 0.0000 | |
| 114 | P | A | -0.7114 | |
| 115 | S | A | -0.6655 | |
| 116 | P | A | -0.3125 | |
| 117 | S | A | 0.0000 | |
| 118 | L | A | 0.0000 | |
| 119 | L | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | F | A | 0.0000 | |
| 122 | V | A | -1.8261 | |
| 123 | E | A | -3.1473 | |
| 124 | G | A | -2.3884 | |
| 125 | E | A | -2.4417 | |
| 126 | L | A | -0.8913 | |
| 127 | A | A | -0.6741 | |
| 128 | K | A | -0.5935 | |
| 129 | V | A | 0.2213 | |
| 130 | V | A | 0.0000 | |
| 131 | P | A | -0.2979 | |
| 132 | G | A | -0.1515 | |
| 133 | L | A | 0.0580 | |
| 134 | P | A | -0.2777 | |
| 135 | S | A | -0.8819 | |
| 136 | P | A | -1.1235 | |
| 137 | E | A | -1.9211 | |
| 138 | A | A | -0.6810 | |
| 139 | L | A | 0.0000 | |
| 140 | L | A | -0.0164 | |
| 141 | A | A | -0.0688 | |
| 142 | A | A | 0.1686 | |
| 143 | L | A | 0.8386 |