Project name: 40915c66727519d

Status: done

Started: 2024-06-17 20:51:09
Settings
Chain sequence(s) A: RPDFCLEPPYTGPCKARIIRYFYNAKAGLCQTFVYGGCRAKRNNFKSAEDCMRTCG
input PDB
Selected Chain(s) A
Distance of aggregation 5 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:45)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:45)
Show buried residues

Minimal score value
-2.0116
Maximal score value
2.0947
Average score
-0.3253
Total score value
-17.8926

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 R A -1.8677
2 P A -0.8016
3 D A -1.7564
4 F A -0.0045
5 C A 0.0000
6 L A 1.5112
7 E A 0.0223
8 P A -0.3149
9 P A -0.0838
10 Y A 0.4039
11 T A 0.0079
12 G A -0.1256
13 P A -0.1246
14 C A -0.0113
15 K A -1.6358
16 A A -0.6277
17 R A -1.7183
18 I A 0.6464
19 I A 2.0947
20 R A 0.0035
21 Y A 0.2507
22 F A 0.0000
23 Y A 0.0000
24 N A -0.2905
25 A A -0.3988
26 K A -1.6872
27 A A -0.3435
28 G A -0.1984
29 L A 1.3028
30 C A 0.2145
31 Q A -0.6839
32 T A -0.1118
33 F A 0.2643
34 V A 0.6643
35 Y A 0.0000
36 G A 0.0000
37 G A -0.3083
38 C A -0.2418
39 R A -1.8050
40 A A -0.4559
41 K A -1.2434
42 R A -2.0116
43 N A 0.0000
44 N A -0.1283
45 F A -0.1296
46 K A -1.6693
47 S A -0.3393
48 A A -0.2952
49 E A -1.7251
50 D A -0.9105
51 C A 0.0000
52 M A 0.7212
53 R A -1.6603
54 T A -0.3590
55 C A 0.0686
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Laboratory of Theory of Biopolymers 2018