Project name: query_structure

Status: done

Started: 2026-03-16 21:20:49
Settings
Chain sequence(s) A: MIIFYGLFSILVLTSINIAEAGHHNRVNCLLPPKTGPCKGSFARYYFDIETGSCKAFIYGGCEGNSNNFSEKHHCEKRCRGFRKFGGK
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:11)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:11)
Show buried residues

Minimal score value
-3.7995
Maximal score value
5.6315
Average score
0.0902
Total score value
7.9378

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 3.4787
2 I A 4.8273
3 I A 5.1562
4 F A 5.5164
5 Y A 5.2519
6 G A 4.5967
7 L A 5.5538
8 F A 5.6315
9 S A 4.2879
10 I A 5.1595
11 L A 4.6229
12 V A 3.8060
13 L A 4.0687
14 T A 2.7771
15 S A 2.4557
16 I A 2.7890
17 N A 0.8499
18 I A 1.6224
19 A A 0.0322
20 E A -1.7157
21 A A -1.3496
22 G A -1.7291
23 H A -2.2914
24 H A -2.1882
25 N A -1.9312
26 R A -1.6625
27 V A 0.6200
28 N A -0.0635
29 C A 0.0000
30 L A 1.6130
31 L A 1.0404
32 P A 0.0334
33 P A -0.4307
34 K A -1.2671
35 T A -0.6474
36 G A -1.2893
37 P A -1.1045
38 C A -1.0364
39 K A -1.4200
40 G A -0.4524
41 S A 0.5700
42 F A 1.6126
43 A A 1.0599
44 R A 0.1326
45 Y A -0.5154
46 Y A -0.2900
47 F A 0.0000
48 D A -0.0647
49 I A 0.1489
50 E A -1.5517
51 T A -0.9676
52 G A 0.0000
53 S A -0.9240
54 C A 0.0000
55 K A -1.0538
56 A A -0.2195
57 F A 0.8675
58 I A 1.7612
59 Y A 0.5312
60 G A 0.0000
61 G A -0.3840
62 C A -1.3108
63 E A -2.1587
64 G A -1.6867
65 N A -1.1260
66 S A -0.5839
67 N A 0.0000
68 N A -0.5395
69 F A -1.1709
70 S A -0.9320
71 E A -2.0999
72 K A -2.6698
73 H A -3.0192
74 H A -3.1403
75 C A 0.0000
76 E A -3.2222
77 K A -3.7995
78 R A -3.7504
79 C A 0.0000
80 R A -3.2040
81 G A -2.1919
82 F A -1.2705
83 R A -2.6356
84 K A -2.2581
85 F A 0.0648
86 G A -1.2500
87 G A -1.9958
88 K A -2.0361
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Laboratory of Theory of Biopolymers 2018