Project name: query_structure

Status: done

Started: 2026-03-16 23:33:09
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Chain sequence(s) A: GSSVPTNLEVVAATPTSLLISWDASSSSVSYYRITYGETGGNSPVQEFTVPSYYSTATISGLKPGVDYTITVYAYYYSYYYYYSYSPISINYRT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:31)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:31)
Show buried residues

Minimal score value
-2.4771
Maximal score value
3.5562
Average score
-0.0532
Total score value
-5.0029

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.5859
2 S A -0.3826
3 S A -0.1542
4 V A -0.0749
5 P A 0.0000
6 T A -1.3048
7 N A -2.0830
8 L A 0.0000
9 E A -1.6963
10 V A 0.1892
11 V A 1.5682
12 A A 0.9224
13 A A 0.3335
14 T A -0.1575
15 P A -1.1142
16 T A -1.0001
17 S A -0.5024
18 L A 0.0000
19 L A 0.8059
20 I A 0.0000
21 S A -0.4398
22 W A 0.0000
23 D A -1.8705
24 A A -0.4609
25 S A -0.5129
26 S A -0.5897
27 S A -0.2172
28 S A 0.0039
29 V A 0.7236
30 S A 0.9272
31 Y A 0.7691
32 Y A 0.0000
33 R A -0.5236
34 I A 0.0000
35 T A 0.0000
36 Y A -0.2376
37 G A 0.0000
38 E A -1.5693
39 T A -1.2518
40 G A -1.3116
41 G A -1.2430
42 N A -1.6842
43 S A -0.8395
44 P A -0.2508
45 V A 0.5314
46 Q A -0.7514
47 E A -1.5981
48 F A -0.5734
49 T A -0.1986
50 V A 0.6514
51 P A 0.7268
52 S A 1.0326
53 Y A 1.9263
54 Y A 1.7852
55 S A 0.5440
56 T A 0.4457
57 A A 0.0000
58 T A 0.1097
59 I A 0.0000
60 S A -0.6466
61 G A -1.0211
62 L A 0.0000
63 K A -2.3576
64 P A -1.6853
65 G A -1.4783
66 V A -1.4562
67 D A -1.9373
68 Y A -1.1879
69 T A -0.6823
70 I A 0.0000
71 T A 0.0000
72 V A 0.0000
73 Y A 0.1772
74 A A 0.0000
75 Y A 1.4074
76 Y A 1.9009
77 Y A 3.0566
78 S A 2.5608
79 Y A 2.6849
80 Y A 3.1957
81 Y A 3.5562
82 Y A 3.4020
83 Y A 2.7309
84 S A 1.3460
85 Y A 0.6415
86 S A 0.0159
87 P A 0.0594
88 I A -0.0048
89 S A -0.4614
90 I A -0.6249
91 N A -1.6481
92 Y A -1.3990
93 R A -2.4771
94 T A -1.4867
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Laboratory of Theory of Biopolymers 2018