| Chain sequence(s) |
B: PSRPVLLHMARNRIEREAYRTGDPQLVHWAFYPDDPETRARLEELAEEIRREMEA
input PDB |
| Selected Chain(s) | B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with B chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:05)
[INFO] Main: Simulation completed successfully. (00:01:05)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | P | B | -0.5834 | |
| 2 | S | B | -0.9664 | |
| 3 | R | B | -2.3398 | |
| 4 | P | B | -0.9463 | |
| 5 | V | B | 0.1604 | |
| 6 | L | B | 0.0000 | |
| 7 | L | B | -1.8714 | |
| 8 | H | B | -1.3621 | |
| 9 | M | B | -0.9960 | |
| 10 | A | B | 0.0000 | |
| 11 | R | B | -2.2030 | |
| 12 | N | B | -2.6626 | |
| 13 | R | B | -2.9578 | |
| 14 | I | B | 0.0000 | |
| 15 | E | B | -2.4648 | |
| 16 | R | B | -3.2159 | |
| 17 | E | B | -2.4340 | |
| 18 | A | B | 0.0000 | |
| 19 | Y | B | -0.7226 | |
| 20 | R | B | -2.1419 | |
| 21 | T | B | -1.3540 | |
| 22 | G | B | -1.3091 | |
| 23 | D | B | -1.3530 | |
| 24 | P | B | -1.1158 | |
| 25 | Q | B | -1.1470 | |
| 26 | L | B | -0.9065 | |
| 27 | V | B | 0.1053 | |
| 28 | H | B | -0.1885 | |
| 29 | W | B | -0.4097 | |
| 30 | A | B | 0.1206 | |
| 31 | F | B | 1.9535 | |
| 32 | Y | B | 1.0030 | |
| 33 | P | B | -0.6164 | |
| 34 | D | B | -1.9158 | |
| 35 | D | B | -1.7804 | |
| 36 | P | B | -2.0770 | |
| 37 | E | B | -2.7240 | |
| 38 | T | B | 0.0000 | |
| 39 | R | B | -3.1509 | |
| 40 | A | B | -2.8588 | |
| 41 | R | B | -2.9875 | |
| 42 | L | B | 0.0000 | |
| 43 | E | B | -4.0290 | |
| 44 | E | B | -3.7594 | |
| 45 | L | B | -2.9886 | |
| 46 | A | B | 0.0000 | |
| 47 | E | B | -4.0726 | |
| 48 | E | B | -3.7303 | |
| 49 | I | B | -2.9673 | |
| 50 | R | B | -3.3847 | |
| 51 | R | B | -4.0926 | |
| 52 | E | B | -3.4837 | |
| 53 | M | B | -1.9745 | |
| 54 | E | B | -2.7232 | |
| 55 | A | B | -1.7697 |