| Chain sequence(s) |
A: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA
B: DAEFRHDSGYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIA input PDB |
| Selected Chain(s) | A,B |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:02:37)
[INFO] Main: Simulation completed successfully. (00:02:38)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | D | A | -2.2219 | |
| 2 | A | A | -2.0629 | |
| 3 | E | A | -2.7244 | |
| 4 | F | A | -1.3010 | |
| 5 | R | A | -2.8064 | |
| 6 | H | A | -2.7406 | |
| 7 | D | A | -2.4780 | |
| 8 | S | A | -1.6710 | |
| 9 | G | A | -1.0242 | |
| 10 | Y | A | -0.7066 | |
| 11 | E | A | -2.0244 | |
| 12 | V | A | -0.6950 | |
| 13 | H | A | -1.2551 | |
| 14 | H | A | -1.4859 | |
| 15 | Q | A | -1.3760 | |
| 16 | K | A | -1.6358 | |
| 17 | L | A | -0.7231 | |
| 18 | V | A | -0.5536 | |
| 19 | F | A | 0.0694 | |
| 20 | F | A | 0.0000 | |
| 21 | A | A | 0.0000 | |
| 22 | E | A | -2.1754 | |
| 23 | D | A | -2.2696 | |
| 24 | V | A | 0.0000 | |
| 25 | G | A | -0.9466 | |
| 26 | S | A | -1.8395 | |
| 27 | N | A | -1.3826 | |
| 28 | K | A | -1.1460 | |
| 29 | G | A | 0.6714 | |
| 30 | A | A | 0.0000 | |
| 31 | I | A | 1.7060 | |
| 32 | I | A | 2.5224 | |
| 33 | G | A | 0.0000 | |
| 34 | L | A | 0.0000 | |
| 35 | M | A | 2.7445 | |
| 36 | V | A | 2.2320 | |
| 37 | G | A | 0.3961 | |
| 38 | G | A | 1.1522 | |
| 39 | V | A | 1.9557 | |
| 40 | V | A | 3.1801 | |
| 41 | I | A | 3.0669 | |
| 42 | A | A | 1.5449 | |
| 1 | D | B | -2.2146 | |
| 2 | A | B | -2.0532 | |
| 3 | E | B | -2.7002 | |
| 4 | F | B | -1.2851 | |
| 5 | R | B | -2.8049 | |
| 6 | H | B | -2.7364 | |
| 7 | D | B | -2.4790 | |
| 8 | S | B | -1.7493 | |
| 9 | G | B | -1.1462 | |
| 10 | Y | B | -0.7449 | |
| 11 | E | B | -2.1197 | |
| 12 | V | B | -0.8101 | |
| 13 | H | B | -1.3938 | |
| 14 | H | B | -1.7267 | |
| 15 | Q | B | -1.7585 | |
| 16 | K | B | -1.8634 | |
| 17 | L | B | -0.8542 | |
| 18 | V | B | -0.7254 | |
| 19 | F | B | -0.3486 | |
| 20 | F | B | 0.0000 | |
| 21 | A | B | 0.0000 | |
| 22 | E | B | -2.2876 | |
| 23 | D | B | -2.3803 | |
| 24 | V | B | 0.0000 | |
| 25 | G | B | -1.0862 | |
| 26 | S | B | -1.8422 | |
| 27 | N | B | -1.4906 | |
| 28 | K | B | -1.3236 | |
| 29 | G | B | 0.5302 | |
| 30 | A | B | 0.0000 | |
| 31 | I | B | 1.4889 | |
| 32 | I | B | 1.9627 | |
| 33 | G | B | 0.0000 | |
| 34 | L | B | 0.0000 | |
| 35 | M | B | 2.9025 | |
| 36 | V | B | 2.2783 | |
| 37 | G | B | 0.5506 | |
| 38 | G | B | 1.2704 | |
| 39 | V | B | 1.8772 | |
| 40 | V | B | 3.2567 | |
| 41 | I | B | 3.0995 | |
| 42 | A | B | 1.5403 |