Project name: 8.P2H9.pdb

Status: done

Started: 2026-03-19 12:31:37
Settings
Chain sequence(s) H: QVQLVESGGGLVQAGGSLKLSCAASGNIFKNLHMGWYRQAPGKQRELVAIITDTSVTNYADSVKGRFTISRDNTKNTAYLQMNNLKPEDTAVYYCNARLPNIVWGRGTQVTVSS
input PDB
Selected Chain(s) H
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with H chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:33)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:34)
Show buried residues

Minimal score value
-3.1299
Maximal score value
1.2087
Average score
-0.7844
Total score value
-89.4195

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 Q H -1.6005
2 V H -1.1546
3 Q H -1.3458
4 L H 0.0000
5 V H 0.0887
6 E H 0.0000
7 S H -0.6768
8 G H -1.0371
9 G H -0.5676
11 G H 0.0951
12 L H 1.1685
13 V H 0.0871
14 Q H -1.3432
15 A H -1.6824
16 G H -1.8156
17 G H -1.2008
18 S H -1.3670
19 L H -0.8403
20 K H -1.7255
21 L H 0.0000
22 S H -0.3058
23 C H 0.0000
24 A H -0.4539
25 A H 0.0000
26 S H -1.2975
27 G H -1.8682
28 N H -2.2570
29 I H 0.0000
30 F H 0.0000
35 K H -3.1299
36 N H -2.4292
37 L H -1.2264
38 H H -0.8206
39 M H 0.0000
40 G H 0.0000
41 W H 0.0000
42 Y H 0.2587
43 R H 0.0000
44 Q H -1.4137
45 A H -1.5248
46 P H -1.2259
47 G H -1.7277
48 K H -2.8178
49 Q H -2.6083
50 R H -1.8002
51 E H -1.2100
52 L H 0.0573
53 V H 0.0000
54 A H 0.0000
55 I H 0.2075
56 I H 0.0000
57 T H -0.6319
58 D H -1.4642
59 T H -0.3506
63 S H 0.1530
64 V H 1.2087
65 T H 0.1398
66 N H -1.1387
67 Y H -1.3884
68 A H -1.4854
69 D H -2.6922
70 S H -1.8242
71 V H 0.0000
72 K H -2.8734
74 G H -1.9064
75 R H -1.8347
76 F H 0.0000
77 T H -0.8710
78 I H 0.0000
79 S H -0.1145
80 R H -1.2579
81 D H -1.6318
82 N H -2.1858
83 T H -1.6436
84 K H -2.2601
85 N H -2.1179
86 T H 0.0000
87 A H 0.0000
88 Y H -0.2367
89 L H 0.0000
90 Q H -0.9762
91 M H 0.0000
92 N H -1.8353
93 N H -2.3183
94 L H 0.0000
95 K H -2.6905
96 P H -1.9273
97 E H -2.3813
98 D H 0.0000
99 T H -0.8052
100 A H 0.0000
101 V H -0.2135
102 Y H 0.0000
103 Y H -0.0910
104 C H 0.0000
105 N H 0.0000
106 A H 0.0000
107 R H -0.0771
108 L H 0.7450
114 P H -0.0592
115 N H -0.5386
116 I H 0.5643
117 V H 0.1649
118 W H 0.1398
119 G H -0.5173
120 R H -1.7011
121 G H -0.7813
122 T H -0.7123
123 Q H -0.6986
124 V H 0.0000
125 T H -0.1608
126 V H 0.0000
127 S H -0.7895
128 S H -0.8400
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Laboratory of Theory of Biopolymers 2018