| Chain sequence(s) |
H: QVQLVESGGGLVQAGGSLKLSCAASGNIFKNLHMGWYRQAPGKQRELVAIITDTSVTNYADSVKGRFTISRDNTKNTAYLQMNNLKPEDTAVYYCNARLPNIVWGRGTQVTVSS
input PDB |
| Selected Chain(s) | H |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with H chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:33)
[INFO] Main: Simulation completed successfully. (00:01:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | Q | H | -1.6005 | |
| 2 | V | H | -1.1546 | |
| 3 | Q | H | -1.3458 | |
| 4 | L | H | 0.0000 | |
| 5 | V | H | 0.0887 | |
| 6 | E | H | 0.0000 | |
| 7 | S | H | -0.6768 | |
| 8 | G | H | -1.0371 | |
| 9 | G | H | -0.5676 | |
| 11 | G | H | 0.0951 | |
| 12 | L | H | 1.1685 | |
| 13 | V | H | 0.0871 | |
| 14 | Q | H | -1.3432 | |
| 15 | A | H | -1.6824 | |
| 16 | G | H | -1.8156 | |
| 17 | G | H | -1.2008 | |
| 18 | S | H | -1.3670 | |
| 19 | L | H | -0.8403 | |
| 20 | K | H | -1.7255 | |
| 21 | L | H | 0.0000 | |
| 22 | S | H | -0.3058 | |
| 23 | C | H | 0.0000 | |
| 24 | A | H | -0.4539 | |
| 25 | A | H | 0.0000 | |
| 26 | S | H | -1.2975 | |
| 27 | G | H | -1.8682 | |
| 28 | N | H | -2.2570 | |
| 29 | I | H | 0.0000 | |
| 30 | F | H | 0.0000 | |
| 35 | K | H | -3.1299 | |
| 36 | N | H | -2.4292 | |
| 37 | L | H | -1.2264 | |
| 38 | H | H | -0.8206 | |
| 39 | M | H | 0.0000 | |
| 40 | G | H | 0.0000 | |
| 41 | W | H | 0.0000 | |
| 42 | Y | H | 0.2587 | |
| 43 | R | H | 0.0000 | |
| 44 | Q | H | -1.4137 | |
| 45 | A | H | -1.5248 | |
| 46 | P | H | -1.2259 | |
| 47 | G | H | -1.7277 | |
| 48 | K | H | -2.8178 | |
| 49 | Q | H | -2.6083 | |
| 50 | R | H | -1.8002 | |
| 51 | E | H | -1.2100 | |
| 52 | L | H | 0.0573 | |
| 53 | V | H | 0.0000 | |
| 54 | A | H | 0.0000 | |
| 55 | I | H | 0.2075 | |
| 56 | I | H | 0.0000 | |
| 57 | T | H | -0.6319 | |
| 58 | D | H | -1.4642 | |
| 59 | T | H | -0.3506 | |
| 63 | S | H | 0.1530 | |
| 64 | V | H | 1.2087 | |
| 65 | T | H | 0.1398 | |
| 66 | N | H | -1.1387 | |
| 67 | Y | H | -1.3884 | |
| 68 | A | H | -1.4854 | |
| 69 | D | H | -2.6922 | |
| 70 | S | H | -1.8242 | |
| 71 | V | H | 0.0000 | |
| 72 | K | H | -2.8734 | |
| 74 | G | H | -1.9064 | |
| 75 | R | H | -1.8347 | |
| 76 | F | H | 0.0000 | |
| 77 | T | H | -0.8710 | |
| 78 | I | H | 0.0000 | |
| 79 | S | H | -0.1145 | |
| 80 | R | H | -1.2579 | |
| 81 | D | H | -1.6318 | |
| 82 | N | H | -2.1858 | |
| 83 | T | H | -1.6436 | |
| 84 | K | H | -2.2601 | |
| 85 | N | H | -2.1179 | |
| 86 | T | H | 0.0000 | |
| 87 | A | H | 0.0000 | |
| 88 | Y | H | -0.2367 | |
| 89 | L | H | 0.0000 | |
| 90 | Q | H | -0.9762 | |
| 91 | M | H | 0.0000 | |
| 92 | N | H | -1.8353 | |
| 93 | N | H | -2.3183 | |
| 94 | L | H | 0.0000 | |
| 95 | K | H | -2.6905 | |
| 96 | P | H | -1.9273 | |
| 97 | E | H | -2.3813 | |
| 98 | D | H | 0.0000 | |
| 99 | T | H | -0.8052 | |
| 100 | A | H | 0.0000 | |
| 101 | V | H | -0.2135 | |
| 102 | Y | H | 0.0000 | |
| 103 | Y | H | -0.0910 | |
| 104 | C | H | 0.0000 | |
| 105 | N | H | 0.0000 | |
| 106 | A | H | 0.0000 | |
| 107 | R | H | -0.0771 | |
| 108 | L | H | 0.7450 | |
| 114 | P | H | -0.0592 | |
| 115 | N | H | -0.5386 | |
| 116 | I | H | 0.5643 | |
| 117 | V | H | 0.1649 | |
| 118 | W | H | 0.1398 | |
| 119 | G | H | -0.5173 | |
| 120 | R | H | -1.7011 | |
| 121 | G | H | -0.7813 | |
| 122 | T | H | -0.7123 | |
| 123 | Q | H | -0.6986 | |
| 124 | V | H | 0.0000 | |
| 125 | T | H | -0.1608 | |
| 126 | V | H | 0.0000 | |
| 127 | S | H | -0.7895 | |
| 128 | S | H | -0.8400 |