| Chain sequence(s) |
A: LPAPKNLVVSEVTEDSLRLSWTWPYADLDSFLIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVHNVYKDTNMRGLPLSAEFTT
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:00:52)
[INFO] Main: Simulation completed successfully. (00:00:52)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | L | A | 0.8423 | |
| 2 | P | A | 0.3365 | |
| 3 | A | A | -0.0342 | |
| 4 | P | A | 0.0000 | |
| 5 | K | A | -2.0685 | |
| 6 | N | A | -1.3879 | |
| 7 | L | A | -0.1553 | |
| 8 | V | A | 0.9340 | |
| 9 | V | A | 0.1118 | |
| 10 | S | A | -0.6198 | |
| 11 | E | A | -1.7824 | |
| 12 | V | A | -0.9060 | |
| 13 | T | A | -1.7802 | |
| 14 | E | A | -2.9099 | |
| 15 | D | A | -2.9429 | |
| 16 | S | A | -2.1714 | |
| 17 | L | A | 0.0000 | |
| 18 | R | A | -1.4484 | |
| 19 | L | A | 0.0000 | |
| 20 | S | A | -0.5048 | |
| 21 | W | A | 0.0000 | |
| 22 | T | A | -1.0279 | |
| 23 | W | A | 0.0000 | |
| 24 | P | A | -0.2517 | |
| 25 | Y | A | 0.5128 | |
| 26 | A | A | -0.5474 | |
| 27 | D | A | -1.8825 | |
| 28 | L | A | 0.0000 | |
| 29 | D | A | -2.3676 | |
| 30 | S | A | -1.7925 | |
| 31 | F | A | 0.0000 | |
| 32 | L | A | -0.4582 | |
| 33 | I | A | 0.0000 | |
| 34 | Q | A | -0.5807 | |
| 35 | Y | A | -0.6243 | |
| 36 | Q | A | -1.4489 | |
| 37 | E | A | -2.0901 | |
| 38 | S | A | -2.0161 | |
| 39 | E | A | -2.4809 | |
| 40 | K | A | -1.8040 | |
| 41 | V | A | 0.0405 | |
| 42 | G | A | -0.9029 | |
| 43 | E | A | -2.0450 | |
| 44 | A | A | -0.9241 | |
| 45 | I | A | -0.4028 | |
| 46 | N | A | -1.0095 | |
| 47 | L | A | -0.1320 | |
| 48 | T | A | -0.2523 | |
| 49 | V | A | 0.0000 | |
| 50 | P | A | -1.0729 | |
| 51 | G | A | -1.4521 | |
| 52 | S | A | -1.4254 | |
| 53 | E | A | -1.4642 | |
| 54 | R | A | -1.1638 | |
| 55 | S | A | -0.8257 | |
| 56 | Y | A | -0.9017 | |
| 57 | D | A | -1.7576 | |
| 58 | L | A | 0.0000 | |
| 59 | T | A | -1.4565 | |
| 60 | G | A | -1.5608 | |
| 61 | L | A | 0.0000 | |
| 62 | K | A | -3.0598 | |
| 63 | P | A | -2.6028 | |
| 64 | G | A | -1.8767 | |
| 65 | T | A | -2.2070 | |
| 66 | E | A | -2.6737 | |
| 67 | Y | A | 0.0000 | |
| 68 | T | A | -1.4413 | |
| 69 | V | A | 0.0000 | |
| 70 | S | A | 0.0000 | |
| 71 | I | A | 0.0000 | |
| 72 | Y | A | 0.0000 | |
| 73 | G | A | 0.0000 | |
| 74 | V | A | 0.0000 | |
| 75 | H | A | -1.9146 | |
| 76 | N | A | -2.5088 | |
| 77 | V | A | -0.9633 | |
| 78 | Y | A | -0.3056 | |
| 79 | K | A | -2.2674 | |
| 80 | D | A | -2.7726 | |
| 81 | T | A | -2.0760 | |
| 82 | N | A | -2.6455 | |
| 83 | M | A | -1.4793 | |
| 84 | R | A | -1.6384 | |
| 85 | G | A | 0.0846 | |
| 86 | L | A | 1.2505 | |
| 87 | P | A | 0.3196 | |
| 88 | L | A | -0.0163 | |
| 89 | S | A | -0.3210 | |
| 90 | A | A | -0.5823 | |
| 91 | E | A | -2.1422 | |
| 92 | F | A | 0.0000 | |
| 93 | T | A | -1.6313 | |
| 94 | T | A | -1.9288 |