| Chain sequence(s) |
I: LTYTDCTESGQNLCLCEGSNVVCGQGNKCILGSSDGEKNQCVTGEGTPKPQSGDFEEIPEEEYLQ
H: IVEGSDAEIIGMSSPWQVMLLFRKSPQELLCGASSLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLLEKIYIHPRYNWREENLDRDIALMKLKKPVAFSDYIHPVCLPDRRETAASLLQAGYKGRVVTGWGNLKETGQPSVLQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKKVIDQFG L: ADCGLRPLFEKKSLEDKTERELLESYI input PDB |
| Selected Chain(s) | I,H,L |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:00)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:05:32)
[INFO] Main: Simulation completed successfully. (00:05:34)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1B | A | L | -0.5598 | |
| 1A | D | L | -1.4572 | |
| 1 | C | L | -0.4366 | |
| 2 | G | L | 0.0000 | |
| 3 | L | L | -1.0734 | |
| 4 | R | L | 0.0000 | |
| 5 | P | L | 0.0000 | |
| 6 | L | L | -0.6231 | |
| 7 | F | L | 0.0000 | |
| 8 | E | L | -1.6275 | |
| 9 | K | L | -2.5211 | |
| 10 | K | L | -2.2809 | |
| 11 | S | L | -1.2982 | |
| 12 | L | L | -0.7291 | |
| 13 | E | L | -2.1419 | |
| 14 | D | L | 0.0000 | |
| 14A | K | L | -2.3677 | |
| 14B | T | L | -1.7159 | |
| 14C | E | L | 0.0000 | |
| 14D | R | L | -2.5910 | |
| 14E | E | L | -2.1009 | |
| 14F | L | L | 0.0000 | |
| 14G | L | L | -0.8487 | |
| 14H | E | L | -1.6682 | |
| 14I | S | L | -0.5487 | |
| 14J | Y | L | 0.3962 | |
| 14K | I | L | 1.5914 | |
| 16 | I | H | 0.0000 | |
| 17 | V | H | 0.0000 | |
| 18 | E | H | -2.6810 | |
| 19 | G | H | -1.6320 | |
| 20 | S | H | -1.5223 | |
| 21 | D | H | -1.7990 | |
| 22 | A | H | 0.0000 | |
| 23 | E | H | -0.2997 | |
| 24 | I | H | 1.0409 | |
| 25 | G | H | 0.4568 | |
| 26 | M | H | 0.0000 | |
| 27 | S | H | 0.0000 | |
| 28 | P | H | 0.0000 | |
| 29 | W | H | 0.0000 | |
| 30 | Q | H | 0.0000 | |
| 31 | V | H | 0.0000 | |
| 32 | M | H | 0.0000 | |
| 33 | L | H | 0.0000 | |
| 34 | F | H | 0.0000 | |
| 35 | R | H | -1.0218 | |
| 36 | K | H | -0.8273 | |
| 36A | S | H | -0.7562 | |
| 37 | P | H | -0.9017 | |
| 38 | Q | H | -1.3991 | |
| 39 | E | H | -1.3212 | |
| 40 | L | H | -0.3709 | |
| 41 | L | H | -0.0275 | |
| 42 | C | H | 0.0000 | |
| 43 | G | H | 0.0000 | |
| 44 | A | H | 0.0000 | |
| 45 | S | H | 0.0000 | |
| 46 | L | H | 0.0000 | |
| 47 | I | H | -0.0129 | |
| 48 | S | H | -0.4705 | |
| 49 | D | H | -1.3360 | |
| 50 | R | H | -1.6840 | |
| 51 | W | H | 0.0000 | |
| 52 | V | H | 0.0000 | |
| 53 | L | H | 0.0000 | |
| 54 | T | H | 0.0000 | |
| 55 | A | H | 0.0000 | |
| 56 | A | H | 0.0000 | |
| 57 | H | H | 0.0000 | |
| 58 | C | H | 0.0000 | |
| 59 | L | H | 0.0000 | |
| 60 | L | H | -0.4587 | |
| 60A | Y | H | 0.0000 | |
| 60B | P | H | -1.2681 | |
| 60C | P | H | -1.1043 | |
| 60D | W | H | -1.2854 | |
| 60E | D | H | -2.0966 | |
| 60F | K | H | -1.5321 | |
| 60G | N | H | -1.6724 | |
| 60H | F | H | -1.0646 | |
| 60I | T | H | -1.2196 | |
| 61 | E | H | -1.6671 | |
| 62 | N | H | -1.9173 | |
| 63 | D | H | -1.6542 | |
| 64 | L | H | 0.0000 | |
| 65 | L | H | 0.0000 | |
| 66 | V | H | 0.0000 | |
| 67 | R | H | 0.0000 | |
| 68 | I | H | 0.0000 | |
| 69 | G | H | 0.0000 | |
| 70 | K | H | 0.0000 | |
| 71 | H | H | -0.1618 | |
| 72 | S | H | -0.4415 | |
| 73 | R | H | 0.0000 | |
| 74 | T | H | -1.7719 | |
| 75 | R | H | -2.6936 | |
| 76 | Y | H | -2.0245 | |
| 77 | E | H | -1.7762 | |
| 77I | R | H | -2.5597 | |
| 78 | N | H | -1.8469 | |
| 79 | I | H | -0.5634 | |
| 80 | E | H | 0.0000 | |
| 81 | K | H | -0.9628 | |
| 82 | I | H | 0.0000 | |
| 83 | S | H | 0.0000 | |
| 84 | M | H | -0.8191 | |
| 85 | L | H | 0.0000 | |
| 86 | E | H | -2.5837 | |
| 87 | K | H | -1.7381 | |
| 88 | I | H | -0.5218 | |
| 89 | Y | H | 0.3499 | |
| 90 | I | H | 0.2099 | |
| 91 | H | H | -0.6706 | |
| 92 | P | H | -1.1417 | |
| 93 | R | H | -2.0854 | |
| 94 | Y | H | 0.0000 | |
| 95 | N | H | -1.9125 | |
| 96 | W | H | -1.6528 | |
| 97 | R | H | -3.0086 | |
| 97A | E | H | -3.2404 | |
| 98 | N | H | -1.9310 | |
| 99 | L | H | 0.0000 | |
| 100 | D | H | 0.0000 | |
| 101 | R | H | -1.3516 | |
| 102 | D | H | 0.0000 | |
| 103 | I | H | 0.0000 | |
| 104 | A | H | 0.0000 | |
| 105 | L | H | 0.0000 | |
| 106 | M | H | 0.0000 | |
| 107 | K | H | -1.3984 | |
| 108 | L | H | 0.0000 | |
| 109 | K | H | -2.5035 | |
| 110 | K | H | -2.6510 | |
| 111 | P | H | -1.6625 | |
| 112 | V | H | 0.0000 | |
| 113 | A | H | -0.0682 | |
| 114 | F | H | 0.4604 | |
| 115 | S | H | -0.0716 | |
| 116 | D | H | -0.8525 | |
| 117 | Y | H | 0.2618 | |
| 118 | I | H | 0.0000 | |
| 119 | H | H | 0.0000 | |
| 120 | P | H | 0.0000 | |
| 121 | V | H | 0.0000 | |
| 122 | C | H | 0.0000 | |
| 123 | L | H | 0.0205 | |
| 124 | P | H | 0.0000 | |
| 125 | D | H | -2.9388 | |
| 126 | R | H | -3.5554 | |
| 127 | E | H | -3.1506 | |
| 128 | T | H | -1.5396 | |
| 129 | A | H | -1.5817 | |
| 129A | A | H | -1.2200 | |
| 129B | S | H | -0.5786 | |
| 129C | L | H | 0.0000 | |
| 130 | L | H | -0.0234 | |
| 131 | Q | H | -0.7751 | |
| 132 | A | H | -0.7325 | |
| 133 | G | H | -0.3169 | |
| 134 | Y | H | -0.1817 | |
| 135 | K | H | -0.5432 | |
| 136 | G | H | 0.0000 | |
| 137 | R | H | 0.0000 | |
| 138 | V | H | 0.0000 | |
| 139 | T | H | 0.0000 | |
| 140 | G | H | 0.0000 | |
| 141 | W | H | 0.0000 | |
| 142 | G | H | 0.0000 | |
| 143 | N | H | -1.3502 | |
| 144 | L | H | -1.5018 | |
| 145 | K | H | -2.4126 | |
| 146 | E | H | -1.5757 | |
| 147 | T | H | -1.0009 | |
| 150 | G | H | -1.3083 | |
| 151 | Q | H | -1.3867 | |
| 152 | P | H | 0.0000 | |
| 153 | S | H | -0.8160 | |
| 154 | V | H | -0.5773 | |
| 155 | L | H | 0.0000 | |
| 156 | Q | H | 0.0000 | |
| 157 | V | H | 0.0000 | |
| 158 | V | H | 0.0000 | |
| 159 | N | H | 0.0000 | |
| 160 | L | H | 0.0000 | |
| 161 | P | H | 0.0000 | |
| 162 | I | H | 0.0000 | |
| 163 | V | H | 0.0000 | |
| 164 | E | H | -1.2304 | |
| 165 | R | H | -1.7445 | |
| 166 | P | H | -1.4068 | |
| 167 | V | H | -1.0993 | |
| 168 | C | H | 0.0000 | |
| 169 | K | H | -2.8173 | |
| 170 | D | H | -2.5925 | |
| 171 | S | H | -1.7677 | |
| 172 | T | H | -1.7354 | |
| 173 | R | H | -2.0014 | |
| 174 | I | H | -1.9674 | |
| 175 | R | H | -2.5537 | |
| 176 | I | H | 0.0000 | |
| 177 | T | H | -1.6101 | |
| 178 | D | H | -2.2250 | |
| 179 | N | H | 0.0000 | |
| 180 | M | H | 0.0000 | |
| 181 | F | H | 0.0000 | |
| 182 | C | H | 0.0000 | |
| 183 | A | H | 0.0000 | |
| 184 | G | H | 0.0000 | |
| 184A | Y | H | -1.9498 | |
| 185 | K | H | -2.3816 | |
| 186 | P | H | -2.8717 | |
| 186A | D | H | -3.1924 | |
| 186B | E | H | -2.8125 | |
| 186C | G | H | -2.5509 | |
| 186D | K | H | -3.3426 | |
| 187 | R | H | -3.3910 | |
| 188 | G | H | 0.0000 | |
| 189 | D | H | -1.1615 | |
| 190 | A | H | -0.7191 | |
| 191 | C | H | 0.0000 | |
| 192 | E | H | -1.0982 | |
| 193 | G | H | -0.3641 | |
| 194 | D | H | 0.0000 | |
| 195 | S | H | 0.0000 | |
| 196 | G | H | 0.0000 | |
| 197 | G | H | 0.0000 | |
| 198 | P | H | 0.0000 | |
| 199 | F | H | 0.0000 | |
| 200 | V | H | 0.0000 | |
| 201 | M | H | 0.0000 | |
| 202 | K | H | 0.0000 | |
| 203 | S | H | 0.0000 | |
| 204 | P | H | 0.0493 | |
| 204A | F | H | 1.0926 | |
| 204B | N | H | -0.5289 | |
| 205 | N | H | -1.0336 | |
| 206 | R | H | -0.8847 | |
| 207 | W | H | 0.0000 | |
| 208 | Y | H | 0.0000 | |
| 209 | Q | H | 0.0000 | |
| 210 | M | H | 0.0000 | |
| 211 | G | H | 0.0000 | |
| 212 | I | H | 0.0000 | |
| 213 | V | H | 0.0000 | |
| 214 | S | H | 0.0000 | |
| 215 | W | H | 0.0000 | |
| 216 | G | H | -0.2508 | |
| 217 | E | H | 0.0000 | |
| 219 | G | H | 0.0000 | |
| 220 | C | H | 0.0000 | |
| 221 | D | H | -1.8806 | |
| 221A | R | H | -1.8505 | |
| 222 | D | H | -2.8001 | |
| 223 | G | H | -1.8499 | |
| 224 | K | H | -1.3881 | |
| 225 | Y | H | 0.0000 | |
| 226 | G | H | 0.0000 | |
| 227 | F | H | 0.0000 | |
| 228 | Y | H | 0.0000 | |
| 229 | T | H | 0.0000 | |
| 230 | H | H | -0.9028 | |
| 231 | V | H | 0.0000 | |
| 232 | F | H | -1.3501 | |
| 233 | R | H | -2.6748 | |
| 234 | L | H | 0.0000 | |
| 235 | K | H | -2.3996 | |
| 236 | K | H | -2.8315 | |
| 237 | W | H | 0.0000 | |
| 238 | I | H | 0.0000 | |
| 239 | Q | H | -2.7425 | |
| 240 | K | H | -3.2110 | |
| 241 | V | H | 0.0000 | |
| 242 | I | H | -1.3033 | |
| 243 | D | H | -2.7068 | |
| 244 | Q | H | -2.0416 | |
| 245 | F | H | -0.4087 | |
| 246 | G | H | -0.9359 | |
| 1 | L | I | 0.0000 | |
| 2 | T | I | -0.5348 | |
| 3 | Y | I | 0.0000 | |
| 4 | T | I | -1.1055 | |
| 5 | D | I | -1.9488 | |
| 6 | C | I | 0.0000 | |
| 7 | T | I | -1.2895 | |
| 8 | E | I | -1.9444 | |
| 9 | S | I | -0.8363 | |
| 10 | G | I | -0.9319 | |
| 11 | Q | I | 0.0000 | |
| 12 | N | I | 0.0000 | |
| 13 | L | I | 0.0000 | |
| 14 | C | I | 0.0000 | |
| 15 | L | I | 0.0000 | |
| 16 | C | I | 0.0000 | |
| 17 | E | I | -1.3939 | |
| 18 | G | I | -1.3752 | |
| 19 | S | I | -1.2215 | |
| 20 | N | I | -1.0479 | |
| 21 | V | I | 0.0000 | |
| 22 | C | I | 0.0000 | |
| 23 | G | I | -1.4055 | |
| 24 | Q | I | -2.3995 | |
| 25 | G | I | -1.8570 | |
| 26 | N | I | -1.4783 | |
| 27 | K | I | -1.3805 | |
| 28 | C | I | 0.0000 | |
| 29 | I | I | 0.1278 | |
| 30 | L | I | -0.9287 | |
| 31 | G | I | -2.1256 | |
| 32 | S | I | -2.0094 | |
| 33 | D | I | -2.9584 | |
| 34 | G | I | -2.7098 | |
| 35 | E | I | -3.6567 | |
| 36 | K | I | -3.2919 | |
| 37 | N | I | -1.6786 | |
| 38 | Q | I | -1.1907 | |
| 39 | C | I | -0.2107 | |
| 40 | V | I | -0.0995 | |
| 41 | T | I | -0.8501 | |
| 42 | G | I | -1.5183 | |
| 43 | E | I | -2.4144 | |
| 44 | G | I | -1.5829 | |
| 45 | T | I | -0.9943 | |
| 46 | P | I | -0.8445 | |
| 47 | K | I | -1.2181 | |
| 48 | P | I | -1.0078 | |
| 49 | Q | I | -1.5153 | |
| 50 | S | I | -0.9764 | |
| 54 | G | I | -1.7439 | |
| 55 | D | I | -2.6195 | |
| 56 | F | I | -2.1125 | |
| 57 | E | I | -2.5180 | |
| 58 | E | I | -2.8867 | |
| 59 | I | I | 0.0000 | |
| 60 | P | I | -1.8549 | |
| 61 | E | I | -2.4554 | |
| 62 | E | I | -2.1959 | |
| 63 | Y | I | -0.6037 | |
| 64 | L | I | -0.1383 |