| Chain sequence(s) |
A: AMAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLK
C: AMAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLK B: AMAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTLK D: AMAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSSTVERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVGDVCISLTL input PDB |
| Selected Chain(s) | A,C,B,D |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:03)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:03)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:03)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:03)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:03)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:10:50)
[INFO] Main: Simulation completed successfully. (00:10:56)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 565 | A | A | -0.3285 | |
| 566 | M | A | -0.3422 | |
| 567 | A | A | 0.0000 | |
| 568 | P | A | 0.0000 | |
| 569 | P | A | 0.0251 | |
| 570 | T | A | -0.0348 | |
| 571 | L | A | 0.0000 | |
| 572 | P | A | 0.0000 | |
| 573 | P | A | 0.0000 | |
| 574 | Y | A | 0.0000 | |
| 575 | F | A | 0.0000 | |
| 576 | M | A | -1.1043 | |
| 577 | K | A | -2.0615 | |
| 578 | G | A | 0.0000 | |
| 579 | S | A | 0.0000 | |
| 580 | I | A | -0.6679 | |
| 581 | I | A | 0.0000 | |
| 582 | Q | A | -1.2772 | |
| 583 | L | A | 0.0000 | |
| 584 | A | A | -0.9603 | |
| 585 | N | A | -1.6193 | |
| 586 | G | A | -1.5084 | |
| 587 | E | A | -1.3079 | |
| 588 | L | A | -0.0979 | |
| 589 | K | A | -1.1707 | |
| 590 | K | A | -1.6624 | |
| 591 | V | A | 0.0000 | |
| 592 | E | A | -2.2120 | |
| 593 | D | A | -2.7943 | |
| 594 | L | A | 0.0000 | |
| 595 | K | A | -2.4347 | |
| 596 | T | A | -1.3623 | |
| 597 | E | A | -2.1493 | |
| 598 | D | A | -2.3208 | |
| 599 | F | A | 0.0000 | |
| 600 | I | A | -1.0710 | |
| 601 | Q | A | -1.4010 | |
| 602 | S | A | -1.1060 | |
| 603 | A | A | 0.0000 | |
| 604 | E | A | -1.5473 | |
| 605 | I | A | 0.1774 | |
| 606 | S | A | -1.1805 | |
| 607 | N | A | -2.2375 | |
| 608 | D | A | -2.6848 | |
| 609 | L | A | 0.0000 | |
| 610 | K | A | -2.1882 | |
| 611 | I | A | -0.8915 | |
| 612 | D | A | -0.9295 | |
| 613 | S | A | -0.2774 | |
| 614 | S | A | 0.0000 | |
| 615 | T | A | -0.3750 | |
| 616 | V | A | 0.0000 | |
| 617 | E | A | -1.6568 | |
| 618 | R | A | -2.1665 | |
| 619 | I | A | -1.4166 | |
| 620 | E | A | -2.9076 | |
| 621 | D | A | -2.7477 | |
| 622 | S | A | -1.8089 | |
| 623 | H | A | -1.7153 | |
| 624 | S | A | -0.9956 | |
| 625 | P | A | -0.7217 | |
| 626 | G | A | -0.5005 | |
| 627 | V | A | -0.7249 | |
| 628 | A | A | 0.0000 | |
| 629 | V | A | -1.3841 | |
| 630 | I | A | 0.0000 | |
| 631 | Q | A | -1.5040 | |
| 632 | F | A | 0.0000 | |
| 633 | A | A | 0.0000 | |
| 634 | V | A | -1.4205 | |
| 635 | G | A | -1.9271 | |
| 636 | E | A | -2.9793 | |
| 637 | H | A | -2.8562 | |
| 638 | R | A | -3.1061 | |
| 639 | A | A | -1.9337 | |
| 640 | Q | A | -1.8580 | |
| 641 | V | A | -0.8017 | |
| 642 | S | A | -0.7664 | |
| 643 | V | A | 0.0000 | |
| 644 | E | A | -0.9702 | |
| 645 | V | A | 0.0000 | |
| 646 | L | A | 0.0469 | |
| 647 | V | A | -0.1395 | |
| 648 | E | A | 0.0000 | |
| 649 | Y | A | 0.2805 | |
| 650 | P | A | 0.0000 | |
| 651 | F | A | 0.0000 | |
| 652 | F | A | 0.0000 | |
| 653 | V | A | 0.0000 | |
| 654 | F | A | 1.0518 | |
| 655 | G | A | -0.4792 | |
| 656 | Q | A | -0.9345 | |
| 657 | G | A | -0.9560 | |
| 658 | W | A | 0.0000 | |
| 659 | S | A | 0.0000 | |
| 660 | S | A | 0.0000 | |
| 661 | C | A | -0.8275 | |
| 662 | C | A | -0.8555 | |
| 663 | P | A | -1.7805 | |
| 664 | E | A | -2.6783 | |
| 665 | R | A | -1.7629 | |
| 666 | T | A | 0.0000 | |
| 667 | S | A | -2.3140 | |
| 668 | Q | A | -2.1208 | |
| 669 | L | A | 0.0000 | |
| 670 | F | A | 0.0000 | |
| 671 | D | A | -2.7950 | |
| 672 | L | A | 0.0000 | |
| 673 | P | A | -1.5281 | |
| 674 | C | A | -1.2641 | |
| 675 | S | A | -1.3768 | |
| 676 | K | A | -1.9522 | |
| 677 | L | A | 0.0000 | |
| 678 | S | A | -0.1525 | |
| 679 | V | A | 0.6441 | |
| 680 | G | A | -0.1263 | |
| 681 | D | A | 0.0000 | |
| 682 | V | A | 0.8138 | |
| 683 | C | A | 0.0000 | |
| 684 | I | A | 0.0000 | |
| 685 | S | A | 0.0744 | |
| 686 | L | A | 0.0000 | |
| 687 | T | A | -0.8240 | |
| 688 | L | A | -1.3725 | |
| 689 | K | A | -2.5095 | |
| 565 | A | B | -0.2132 | |
| 566 | M | B | -0.1039 | |
| 567 | A | B | 0.0000 | |
| 568 | P | B | 0.0000 | |
| 569 | P | B | 0.0000 | |
| 570 | T | B | 0.0000 | |
| 571 | L | B | 0.0786 | |
| 572 | P | B | 0.0000 | |
| 573 | P | B | -0.0843 | |
| 574 | Y | B | 0.0000 | |
| 575 | F | B | 0.0000 | |
| 576 | M | B | 0.0000 | |
| 577 | K | B | -1.6269 | |
| 578 | G | B | -1.3314 | |
| 579 | S | B | 0.0000 | |
| 580 | I | B | -0.9768 | |
| 581 | I | B | 0.0000 | |
| 582 | Q | B | -1.2333 | |
| 583 | L | B | 0.0000 | |
| 584 | A | B | -1.2906 | |
| 585 | N | B | -1.9102 | |
| 586 | G | B | -1.8873 | |
| 587 | E | B | -2.2741 | |
| 588 | L | B | -1.2193 | |
| 589 | K | B | -1.8871 | |
| 590 | K | B | -2.5471 | |
| 591 | V | B | 0.0000 | |
| 592 | E | B | -3.0463 | |
| 593 | D | B | -3.0366 | |
| 594 | L | B | 0.0000 | |
| 595 | K | B | -1.2417 | |
| 596 | T | B | 0.0000 | |
| 597 | E | B | -0.7424 | |
| 598 | D | B | 0.0000 | |
| 599 | F | B | 0.0000 | |
| 600 | I | B | -0.5210 | |
| 601 | Q | B | -1.2308 | |
| 602 | S | B | 0.0000 | |
| 603 | A | B | -1.2257 | |
| 604 | E | B | -1.8211 | |
| 605 | I | B | -0.6488 | |
| 606 | S | B | -1.1530 | |
| 607 | N | B | -2.1853 | |
| 608 | D | B | -2.2798 | |
| 609 | L | B | 0.0000 | |
| 610 | K | B | -1.4770 | |
| 611 | I | B | -0.4618 | |
| 612 | D | B | -0.7450 | |
| 613 | S | B | -0.4715 | |
| 614 | S | B | 0.0000 | |
| 615 | T | B | 0.0000 | |
| 616 | V | B | 0.0000 | |
| 617 | E | B | 0.0000 | |
| 618 | R | B | -1.1392 | |
| 619 | I | B | -1.0786 | |
| 620 | E | B | -2.7705 | |
| 621 | D | B | -2.8945 | |
| 622 | S | B | -2.0411 | |
| 623 | H | B | -1.6889 | |
| 624 | S | B | -1.1994 | |
| 625 | P | B | -0.8861 | |
| 626 | G | B | -0.5812 | |
| 627 | V | B | -1.0908 | |
| 628 | A | B | 0.0000 | |
| 629 | V | B | -1.6030 | |
| 630 | I | B | 0.0000 | |
| 631 | Q | B | -1.1714 | |
| 632 | F | B | 0.0000 | |
| 633 | A | B | 0.0000 | |
| 634 | V | B | -0.9785 | |
| 635 | G | B | -1.5893 | |
| 636 | E | B | -2.5538 | |
| 637 | H | B | -2.2976 | |
| 638 | R | B | -1.8686 | |
| 639 | A | B | -1.3481 | |
| 640 | Q | B | -1.4039 | |
| 641 | V | B | -0.5065 | |
| 642 | S | B | -0.7928 | |
| 643 | V | B | 0.0000 | |
| 644 | E | B | -1.9291 | |
| 645 | V | B | 0.0000 | |
| 646 | L | B | -0.0013 | |
| 647 | V | B | -0.1920 | |
| 648 | E | B | 0.0000 | |
| 649 | Y | B | 0.0000 | |
| 650 | P | B | 0.0000 | |
| 651 | F | B | 0.0000 | |
| 652 | F | B | 0.0000 | |
| 653 | V | B | 0.0000 | |
| 654 | F | B | 0.0000 | |
| 655 | G | B | 0.0000 | |
| 656 | Q | B | -0.7503 | |
| 657 | G | B | 0.0000 | |
| 658 | W | B | 0.0000 | |
| 659 | S | B | 0.0000 | |
| 660 | S | B | 0.0000 | |
| 661 | C | B | -0.7992 | |
| 662 | C | B | -0.9151 | |
| 663 | P | B | -1.7073 | |
| 664 | E | B | -2.8155 | |
| 665 | R | B | -2.0351 | |
| 666 | T | B | 0.0000 | |
| 667 | S | B | -2.2702 | |
| 668 | Q | B | -2.6461 | |
| 669 | L | B | 0.0000 | |
| 670 | F | B | 0.0000 | |
| 671 | D | B | -2.8621 | |
| 672 | L | B | 0.0000 | |
| 673 | P | B | -1.4451 | |
| 674 | C | B | -1.3737 | |
| 675 | S | B | -1.4660 | |
| 676 | K | B | -2.1021 | |
| 677 | L | B | 0.0000 | |
| 678 | S | B | -0.4192 | |
| 679 | V | B | -0.1169 | |
| 680 | G | B | -0.5232 | |
| 681 | D | B | 0.0000 | |
| 682 | V | B | 0.0886 | |
| 683 | C | B | 0.0000 | |
| 684 | I | B | 0.0000 | |
| 685 | S | B | 0.0000 | |
| 686 | L | B | 0.0000 | |
| 687 | T | B | -0.5884 | |
| 688 | L | B | -1.3768 | |
| 689 | K | B | -2.2232 | |
| 565 | A | C | -0.0526 | |
| 566 | M | C | -0.1293 | |
| 567 | A | C | 0.0000 | |
| 568 | P | C | 0.0000 | |
| 569 | P | C | 0.0517 | |
| 570 | T | C | -0.0365 | |
| 571 | L | C | 0.0000 | |
| 572 | P | C | 0.0000 | |
| 573 | P | C | 0.0000 | |
| 574 | Y | C | 0.0000 | |
| 575 | F | C | 0.0000 | |
| 576 | M | C | 0.0000 | |
| 577 | K | C | -2.0097 | |
| 578 | G | C | -1.2773 | |
| 579 | S | C | 0.0000 | |
| 580 | I | C | -0.4772 | |
| 581 | I | C | 0.0000 | |
| 582 | Q | C | -1.1150 | |
| 583 | L | C | 0.0000 | |
| 584 | A | C | -0.8383 | |
| 585 | N | C | -1.7242 | |
| 586 | G | C | -1.7016 | |
| 587 | E | C | -1.8035 | |
| 588 | L | C | -0.4489 | |
| 589 | K | C | -1.4269 | |
| 590 | K | C | -1.8615 | |
| 591 | V | C | 0.0000 | |
| 592 | E | C | -2.3393 | |
| 593 | D | C | -2.9303 | |
| 594 | L | C | 0.0000 | |
| 595 | K | C | -2.6232 | |
| 596 | T | C | -1.3499 | |
| 597 | E | C | -1.4670 | |
| 598 | D | C | -1.7593 | |
| 599 | F | C | 0.0000 | |
| 600 | I | C | 0.0000 | |
| 601 | Q | C | -0.7046 | |
| 602 | S | C | 0.0000 | |
| 603 | A | C | 0.0000 | |
| 604 | E | C | -0.4163 | |
| 605 | I | C | 0.2427 | |
| 606 | S | C | -1.0583 | |
| 607 | N | C | -2.2048 | |
| 608 | D | C | -2.6997 | |
| 609 | L | C | -1.6453 | |
| 610 | K | C | -1.3141 | |
| 611 | I | C | 0.0000 | |
| 612 | D | C | -0.4009 | |
| 613 | S | C | -0.0481 | |
| 614 | S | C | 0.0000 | |
| 615 | T | C | -0.3531 | |
| 616 | V | C | 0.0000 | |
| 617 | E | C | -1.9152 | |
| 618 | R | C | -2.3998 | |
| 619 | I | C | -1.6270 | |
| 620 | E | C | -2.9401 | |
| 621 | D | C | -2.7859 | |
| 622 | S | C | -1.7813 | |
| 623 | H | C | -1.6963 | |
| 624 | S | C | -0.9608 | |
| 625 | P | C | -0.7564 | |
| 626 | G | C | -0.4914 | |
| 627 | V | C | -0.5987 | |
| 628 | A | C | 0.0000 | |
| 629 | V | C | -1.2486 | |
| 630 | I | C | 0.0000 | |
| 631 | Q | C | -1.5992 | |
| 632 | F | C | 0.0000 | |
| 633 | A | C | -1.2544 | |
| 634 | V | C | 0.0000 | |
| 635 | G | C | 0.0000 | |
| 636 | E | C | -0.9880 | |
| 637 | H | C | -1.4243 | |
| 638 | R | C | -1.1888 | |
| 639 | A | C | -1.0463 | |
| 640 | Q | C | -1.3886 | |
| 641 | V | C | -0.2796 | |
| 642 | S | C | -0.5780 | |
| 643 | V | C | 0.0000 | |
| 644 | E | C | -0.6961 | |
| 645 | V | C | 0.0000 | |
| 646 | L | C | 0.3089 | |
| 647 | V | C | -0.1123 | |
| 648 | E | C | 0.0000 | |
| 649 | Y | C | 0.2607 | |
| 650 | P | C | 0.0000 | |
| 651 | F | C | 0.0000 | |
| 652 | F | C | 0.0000 | |
| 653 | V | C | 0.0000 | |
| 654 | F | C | 0.0728 | |
| 655 | G | C | -0.8301 | |
| 656 | Q | C | -1.0858 | |
| 657 | G | C | -1.1514 | |
| 658 | W | C | 0.0000 | |
| 659 | S | C | 0.0000 | |
| 660 | S | C | 0.0000 | |
| 661 | C | C | -0.6691 | |
| 662 | C | C | -0.9272 | |
| 663 | P | C | -1.8965 | |
| 664 | E | C | -2.8898 | |
| 665 | R | C | -2.0705 | |
| 666 | T | C | 0.0000 | |
| 667 | S | C | -2.4811 | |
| 668 | Q | C | -2.5447 | |
| 669 | L | C | 0.0000 | |
| 670 | F | C | 0.0000 | |
| 671 | D | C | -2.8721 | |
| 672 | L | C | 0.0000 | |
| 673 | P | C | -1.4432 | |
| 674 | C | C | -1.2182 | |
| 675 | S | C | -1.2763 | |
| 676 | K | C | -1.9587 | |
| 677 | L | C | 0.0000 | |
| 678 | S | C | -0.3455 | |
| 679 | V | C | 0.2210 | |
| 680 | G | C | -0.3886 | |
| 681 | D | C | -0.1674 | |
| 682 | V | C | 0.3909 | |
| 683 | C | C | 0.0000 | |
| 684 | I | C | 0.0000 | |
| 685 | S | C | -0.0832 | |
| 686 | L | C | 0.0000 | |
| 687 | T | C | 0.0000 | |
| 688 | L | C | -1.2306 | |
| 689 | K | C | -2.6447 | |
| 565 | A | D | 0.0917 | |
| 566 | M | D | 0.2984 | |
| 567 | A | D | 0.0000 | |
| 568 | P | D | 0.0000 | |
| 569 | P | D | 0.0000 | |
| 570 | T | D | 0.0000 | |
| 571 | L | D | 0.0000 | |
| 572 | P | D | 0.0000 | |
| 573 | P | D | -0.1731 | |
| 574 | Y | D | 0.0000 | |
| 575 | F | D | 0.0000 | |
| 576 | M | D | 0.0000 | |
| 577 | K | D | -1.7138 | |
| 578 | G | D | -1.1302 | |
| 579 | S | D | 0.0000 | |
| 580 | I | D | -0.4575 | |
| 581 | I | D | 0.0000 | |
| 582 | Q | D | -1.0281 | |
| 583 | L | D | 0.0000 | |
| 584 | A | D | -0.8214 | |
| 585 | N | D | -1.3182 | |
| 586 | G | D | -1.5864 | |
| 587 | E | D | -1.9928 | |
| 588 | L | D | -0.8794 | |
| 589 | K | D | -1.6401 | |
| 590 | K | D | -1.6070 | |
| 591 | V | D | 0.0000 | |
| 592 | E | D | -2.4859 | |
| 593 | D | D | -2.8057 | |
| 594 | L | D | 0.0000 | |
| 595 | K | D | -2.9402 | |
| 596 | T | D | 0.0000 | |
| 597 | E | D | -2.3502 | |
| 598 | D | D | 0.0000 | |
| 599 | F | D | 0.0000 | |
| 600 | I | D | -1.1155 | |
| 601 | Q | D | -1.2946 | |
| 602 | S | D | 0.0000 | |
| 603 | A | D | -1.5455 | |
| 604 | E | D | -1.7395 | |
| 605 | I | D | 0.2206 | |
| 606 | S | D | -0.9386 | |
| 607 | N | D | -1.9306 | |
| 608 | D | D | -1.9471 | |
| 609 | L | D | -1.4924 | |
| 610 | K | D | -2.0189 | |
| 611 | I | D | -0.9765 | |
| 612 | D | D | -0.9348 | |
| 613 | S | D | -0.3807 | |
| 614 | S | D | 0.0000 | |
| 615 | T | D | -0.2767 | |
| 616 | V | D | 0.0000 | |
| 617 | E | D | -1.0302 | |
| 618 | R | D | -1.8141 | |
| 619 | I | D | -1.1927 | |
| 620 | E | D | -2.7559 | |
| 621 | D | D | -2.7829 | |
| 622 | S | D | -1.8804 | |
| 623 | H | D | -1.5441 | |
| 624 | S | D | -1.0536 | |
| 625 | P | D | -0.8322 | |
| 626 | G | D | -0.6452 | |
| 627 | V | D | 0.0000 | |
| 628 | A | D | 0.0000 | |
| 629 | V | D | -1.2528 | |
| 630 | I | D | 0.0000 | |
| 631 | Q | D | -1.3002 | |
| 632 | F | D | 0.0000 | |
| 633 | A | D | 0.0000 | |
| 634 | V | D | -1.2285 | |
| 635 | G | D | -1.7745 | |
| 636 | E | D | -2.8316 | |
| 637 | H | D | -2.8606 | |
| 638 | R | D | -2.9092 | |
| 639 | A | D | -1.8105 | |
| 640 | Q | D | -1.6421 | |
| 641 | V | D | -0.7523 | |
| 642 | S | D | -0.7235 | |
| 643 | V | D | 0.0000 | |
| 644 | E | D | -0.9362 | |
| 645 | V | D | 0.0000 | |
| 646 | L | D | 0.0000 | |
| 647 | V | D | -0.2352 | |
| 648 | E | D | 0.0000 | |
| 649 | Y | D | 0.0000 | |
| 650 | P | D | 0.0000 | |
| 651 | F | D | 0.0000 | |
| 652 | F | D | 0.0000 | |
| 653 | V | D | 0.0000 | |
| 654 | F | D | 0.3314 | |
| 655 | G | D | -0.9546 | |
| 656 | Q | D | -1.4484 | |
| 657 | G | D | -1.1235 | |
| 658 | W | D | 0.0000 | |
| 659 | S | D | 0.0000 | |
| 660 | S | D | 0.0000 | |
| 661 | C | D | -0.6250 | |
| 662 | C | D | -0.9534 | |
| 663 | P | D | -1.7285 | |
| 664 | E | D | -2.8119 | |
| 665 | R | D | -2.0605 | |
| 666 | T | D | 0.0000 | |
| 667 | S | D | -2.3264 | |
| 668 | Q | D | -2.5348 | |
| 669 | L | D | -1.7678 | |
| 670 | F | D | 0.0000 | |
| 671 | D | D | -2.8063 | |
| 672 | L | D | 0.0000 | |
| 673 | P | D | -1.3944 | |
| 674 | C | D | -1.4925 | |
| 675 | S | D | -1.4325 | |
| 676 | K | D | -1.9257 | |
| 677 | L | D | 0.0000 | |
| 678 | S | D | -0.0676 | |
| 679 | V | D | 0.7400 | |
| 680 | G | D | 0.0402 | |
| 681 | D | D | 0.0925 | |
| 682 | V | D | 0.6022 | |
| 683 | C | D | 0.0000 | |
| 684 | I | D | 0.0000 | |
| 685 | S | D | 0.0000 | |
| 686 | L | D | 0.0000 | |
| 687 | T | D | -0.6218 | |
| 688 | L | D | -0.5693 |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine