Project name: BBN-StrongResp

Status: done

Started: 2026-06-26 13:54:08
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Chain sequence(s) A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARMTLKKTLVTSKLPLITCYEGAKPGLTVNAEENAQMNSACVNSSCIKGQLQSGFITSALQYSFSSAGEAPFYLWGSMNTEEAANTMVNFYTSVAPVLRGQPCEEQSQVRFQRSPWPLTFEPSAGIFRLKYESQKSKSNYAAVGNDGGFPSSYPYDVPDYA
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:01)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:01:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:01:58)
Show buried residues

Minimal score value
-3.5653
Maximal score value
4.2891
Average score
-0.0845
Total score value
-15.8881

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 M A 0.3179
2 D A -1.1810
3 A A -0.7354
4 M A -0.6662
5 K A -2.2349
6 R A -2.1211
7 G A -0.7395
8 L A 1.1904
9 C A 2.3000
10 C A 2.9165
11 V A 4.2891
12 L A 3.8903
13 L A 3.3242
14 L A 3.0423
15 C A 1.9588
16 G A 1.1987
17 A A 1.8948
18 V A 3.0481
19 F A 3.5418
20 V A 3.0246
21 S A 0.9098
22 P A -0.3542
23 S A -0.8719
24 Q A -1.5974
25 E A -1.7407
26 I A 0.2158
27 H A -0.9263
28 A A -0.5937
29 R A -1.1395
30 M A 0.2385
31 T A 0.0400
32 L A 0.2981
33 K A -1.4815
34 K A -1.4740
35 T A 0.1268
36 L A 1.6409
37 V A 1.9694
38 T A 0.9032
39 S A 0.0990
40 K A -0.6955
41 L A 1.4419
42 P A 1.4107
43 L A 2.6340
44 I A 3.2228
45 T A 1.8050
46 C A 1.5278
47 Y A 0.8884
48 E A -1.4010
49 G A -1.3305
50 A A -1.0137
51 K A -1.9179
52 P A -0.9499
53 G A -0.1061
54 L A 1.2137
55 T A 1.0586
56 V A 0.7772
57 N A -1.4317
58 A A -2.0108
59 E A -3.3087
60 E A -3.5653
61 N A -3.0026
62 A A -2.3787
63 Q A -2.3293
64 M A -0.8316
65 N A -1.1585
66 S A -0.4587
67 A A 0.1767
68 C A 0.8145
69 V A 1.2331
70 N A -0.3153
71 S A 0.0744
72 S A 0.1778
73 C A 0.9670
74 I A 1.1607
75 K A -0.8817
76 G A -0.9239
77 Q A -1.1091
78 L A -0.0891
79 Q A -0.7691
80 S A -0.2657
81 G A -0.1679
82 F A 1.6847
83 I A 1.3195
84 T A 0.6490
85 S A 0.4680
86 A A 0.0463
87 L A 0.3114
88 Q A -0.2058
89 Y A 0.9224
90 S A 0.8976
91 F A 1.4771
92 S A 0.2582
93 S A -0.1456
94 A A -0.4566
95 G A -1.1845
96 E A -1.8032
97 A A -0.3336
98 P A 0.1024
99 F A 1.0805
100 Y A 1.5594
101 L A 0.0000
102 W A 1.1707
103 G A 0.7003
104 S A 0.1773
105 M A -0.2566
106 N A -1.3501
107 T A -1.7407
108 E A -3.0762
109 E A -3.1659
110 A A -1.4822
111 A A -1.2339
112 N A -1.5913
113 T A -0.3769
114 M A 0.8377
115 V A 0.9147
116 N A 0.2579
117 F A 1.1232
118 Y A 1.5388
119 T A 1.4000
120 S A 1.1682
121 V A 2.4473
122 A A 1.2801
123 P A 1.7566
124 V A 2.5914
125 L A 1.2667
126 R A -0.9487
127 G A -1.2907
128 Q A -1.4326
129 P A -1.1280
130 C A -1.1187
131 E A -2.9591
132 E A -3.3622
133 Q A -2.5639
134 S A -2.0374
135 Q A -1.6502
136 V A -0.4825
137 R A -1.9807
138 F A -1.2419
139 Q A -2.3285
140 R A -2.4545
141 S A -1.0177
142 P A -0.2953
143 W A 1.0079
144 P A 1.2009
145 L A 2.1494
146 T A 1.2355
147 F A 1.6212
148 E A -0.8172
149 P A -0.6479
150 S A -0.5678
151 A A 0.1189
152 G A 0.3385
153 I A 1.4967
154 F A 2.0996
155 R A -0.3628
156 L A -0.1634
157 K A -1.5272
158 Y A -1.0427
159 E A -2.5474
160 S A -2.2089
161 Q A -2.9285
162 K A -3.1843
163 S A -2.5759
164 K A -2.7303
165 S A -1.5600
166 N A -1.2189
167 Y A 0.7096
168 A A 0.7592
169 A A 0.8578
170 V A 1.1965
171 G A -0.7981
172 N A -2.0797
173 D A -2.4630
174 G A -1.5761
175 G A -0.4574
176 F A 1.2180
177 P A 0.5539
178 S A 0.2773
179 S A 0.4454
180 Y A 1.0489
181 P A 0.7100
182 Y A 1.0423
183 D A -0.4545
184 V A 0.8386
185 P A -0.1798
186 D A -0.9882
187 Y A 0.6287
188 A A 0.2317
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Laboratory of Theory of Biopolymers 2018