| Chain sequence(s) |
A: MDAMKRGLCCVLLLCGAVFVSPSQEIHARMTLKKTLVTSKLPLITCYEGAKPGLTVNAEENAQMNSACVNSSCIKGQLQSGFITSALQYSFSSAGEAPFYLWGSMNTEEAANTMVNFYTSVAPVLRGQPCEEQSQVRFQRSPWPLTFEPSAGIFRLKYESQKSKSNYAAVGNDGGFPSSYPYDVPDYA
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:01)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:01:56)
[INFO] Main: Simulation completed successfully. (00:01:58)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 0.3179 | |
| 2 | D | A | -1.1810 | |
| 3 | A | A | -0.7354 | |
| 4 | M | A | -0.6662 | |
| 5 | K | A | -2.2349 | |
| 6 | R | A | -2.1211 | |
| 7 | G | A | -0.7395 | |
| 8 | L | A | 1.1904 | |
| 9 | C | A | 2.3000 | |
| 10 | C | A | 2.9165 | |
| 11 | V | A | 4.2891 | |
| 12 | L | A | 3.8903 | |
| 13 | L | A | 3.3242 | |
| 14 | L | A | 3.0423 | |
| 15 | C | A | 1.9588 | |
| 16 | G | A | 1.1987 | |
| 17 | A | A | 1.8948 | |
| 18 | V | A | 3.0481 | |
| 19 | F | A | 3.5418 | |
| 20 | V | A | 3.0246 | |
| 21 | S | A | 0.9098 | |
| 22 | P | A | -0.3542 | |
| 23 | S | A | -0.8719 | |
| 24 | Q | A | -1.5974 | |
| 25 | E | A | -1.7407 | |
| 26 | I | A | 0.2158 | |
| 27 | H | A | -0.9263 | |
| 28 | A | A | -0.5937 | |
| 29 | R | A | -1.1395 | |
| 30 | M | A | 0.2385 | |
| 31 | T | A | 0.0400 | |
| 32 | L | A | 0.2981 | |
| 33 | K | A | -1.4815 | |
| 34 | K | A | -1.4740 | |
| 35 | T | A | 0.1268 | |
| 36 | L | A | 1.6409 | |
| 37 | V | A | 1.9694 | |
| 38 | T | A | 0.9032 | |
| 39 | S | A | 0.0990 | |
| 40 | K | A | -0.6955 | |
| 41 | L | A | 1.4419 | |
| 42 | P | A | 1.4107 | |
| 43 | L | A | 2.6340 | |
| 44 | I | A | 3.2228 | |
| 45 | T | A | 1.8050 | |
| 46 | C | A | 1.5278 | |
| 47 | Y | A | 0.8884 | |
| 48 | E | A | -1.4010 | |
| 49 | G | A | -1.3305 | |
| 50 | A | A | -1.0137 | |
| 51 | K | A | -1.9179 | |
| 52 | P | A | -0.9499 | |
| 53 | G | A | -0.1061 | |
| 54 | L | A | 1.2137 | |
| 55 | T | A | 1.0586 | |
| 56 | V | A | 0.7772 | |
| 57 | N | A | -1.4317 | |
| 58 | A | A | -2.0108 | |
| 59 | E | A | -3.3087 | |
| 60 | E | A | -3.5653 | |
| 61 | N | A | -3.0026 | |
| 62 | A | A | -2.3787 | |
| 63 | Q | A | -2.3293 | |
| 64 | M | A | -0.8316 | |
| 65 | N | A | -1.1585 | |
| 66 | S | A | -0.4587 | |
| 67 | A | A | 0.1767 | |
| 68 | C | A | 0.8145 | |
| 69 | V | A | 1.2331 | |
| 70 | N | A | -0.3153 | |
| 71 | S | A | 0.0744 | |
| 72 | S | A | 0.1778 | |
| 73 | C | A | 0.9670 | |
| 74 | I | A | 1.1607 | |
| 75 | K | A | -0.8817 | |
| 76 | G | A | -0.9239 | |
| 77 | Q | A | -1.1091 | |
| 78 | L | A | -0.0891 | |
| 79 | Q | A | -0.7691 | |
| 80 | S | A | -0.2657 | |
| 81 | G | A | -0.1679 | |
| 82 | F | A | 1.6847 | |
| 83 | I | A | 1.3195 | |
| 84 | T | A | 0.6490 | |
| 85 | S | A | 0.4680 | |
| 86 | A | A | 0.0463 | |
| 87 | L | A | 0.3114 | |
| 88 | Q | A | -0.2058 | |
| 89 | Y | A | 0.9224 | |
| 90 | S | A | 0.8976 | |
| 91 | F | A | 1.4771 | |
| 92 | S | A | 0.2582 | |
| 93 | S | A | -0.1456 | |
| 94 | A | A | -0.4566 | |
| 95 | G | A | -1.1845 | |
| 96 | E | A | -1.8032 | |
| 97 | A | A | -0.3336 | |
| 98 | P | A | 0.1024 | |
| 99 | F | A | 1.0805 | |
| 100 | Y | A | 1.5594 | |
| 101 | L | A | 0.0000 | |
| 102 | W | A | 1.1707 | |
| 103 | G | A | 0.7003 | |
| 104 | S | A | 0.1773 | |
| 105 | M | A | -0.2566 | |
| 106 | N | A | -1.3501 | |
| 107 | T | A | -1.7407 | |
| 108 | E | A | -3.0762 | |
| 109 | E | A | -3.1659 | |
| 110 | A | A | -1.4822 | |
| 111 | A | A | -1.2339 | |
| 112 | N | A | -1.5913 | |
| 113 | T | A | -0.3769 | |
| 114 | M | A | 0.8377 | |
| 115 | V | A | 0.9147 | |
| 116 | N | A | 0.2579 | |
| 117 | F | A | 1.1232 | |
| 118 | Y | A | 1.5388 | |
| 119 | T | A | 1.4000 | |
| 120 | S | A | 1.1682 | |
| 121 | V | A | 2.4473 | |
| 122 | A | A | 1.2801 | |
| 123 | P | A | 1.7566 | |
| 124 | V | A | 2.5914 | |
| 125 | L | A | 1.2667 | |
| 126 | R | A | -0.9487 | |
| 127 | G | A | -1.2907 | |
| 128 | Q | A | -1.4326 | |
| 129 | P | A | -1.1280 | |
| 130 | C | A | -1.1187 | |
| 131 | E | A | -2.9591 | |
| 132 | E | A | -3.3622 | |
| 133 | Q | A | -2.5639 | |
| 134 | S | A | -2.0374 | |
| 135 | Q | A | -1.6502 | |
| 136 | V | A | -0.4825 | |
| 137 | R | A | -1.9807 | |
| 138 | F | A | -1.2419 | |
| 139 | Q | A | -2.3285 | |
| 140 | R | A | -2.4545 | |
| 141 | S | A | -1.0177 | |
| 142 | P | A | -0.2953 | |
| 143 | W | A | 1.0079 | |
| 144 | P | A | 1.2009 | |
| 145 | L | A | 2.1494 | |
| 146 | T | A | 1.2355 | |
| 147 | F | A | 1.6212 | |
| 148 | E | A | -0.8172 | |
| 149 | P | A | -0.6479 | |
| 150 | S | A | -0.5678 | |
| 151 | A | A | 0.1189 | |
| 152 | G | A | 0.3385 | |
| 153 | I | A | 1.4967 | |
| 154 | F | A | 2.0996 | |
| 155 | R | A | -0.3628 | |
| 156 | L | A | -0.1634 | |
| 157 | K | A | -1.5272 | |
| 158 | Y | A | -1.0427 | |
| 159 | E | A | -2.5474 | |
| 160 | S | A | -2.2089 | |
| 161 | Q | A | -2.9285 | |
| 162 | K | A | -3.1843 | |
| 163 | S | A | -2.5759 | |
| 164 | K | A | -2.7303 | |
| 165 | S | A | -1.5600 | |
| 166 | N | A | -1.2189 | |
| 167 | Y | A | 0.7096 | |
| 168 | A | A | 0.7592 | |
| 169 | A | A | 0.8578 | |
| 170 | V | A | 1.1965 | |
| 171 | G | A | -0.7981 | |
| 172 | N | A | -2.0797 | |
| 173 | D | A | -2.4630 | |
| 174 | G | A | -1.5761 | |
| 175 | G | A | -0.4574 | |
| 176 | F | A | 1.2180 | |
| 177 | P | A | 0.5539 | |
| 178 | S | A | 0.2773 | |
| 179 | S | A | 0.4454 | |
| 180 | Y | A | 1.0489 | |
| 181 | P | A | 0.7100 | |
| 182 | Y | A | 1.0423 | |
| 183 | D | A | -0.4545 | |
| 184 | V | A | 0.8386 | |
| 185 | P | A | -0.1798 | |
| 186 | D | A | -0.9882 | |
| 187 | Y | A | 0.6287 | |
| 188 | A | A | 0.2317 |