| Chain sequence(s) |
A: MRVLYLLFSFLFIFLMPLPGVFGGIGDPVTCLKSGAICHPVFCPRRYKQIGTCGLPGTKCCKKPEAAKFLRSEELRQRLMSESEAASESRSPSAAAMGPETSKKIKLLPKGDLTDIGDKGVNLSGGQGPGPGVSAYSFSITAYFPEGGPGPGALQLMGGTPRSVDGPAAYVLFSGTLRFGPGPGIQHTVRNEF
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:02)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:02)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:02)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:02)
[INFO] FoldX: Starting FoldX energy minimalization (00:00:02)
[INFO] Analysis: Starting Aggrescan3D on folded.pdb (00:03:19)
[INFO] Main: Simulation completed successfully. (00:03:21)
|
The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan3D score | mutation |
|---|---|---|---|---|
| residue index | residue name | chain | Aggrescan3D score | |
| 1 | M | A | 1.4276 | |
| 2 | R | A | 0.5893 | |
| 3 | V | A | 2.8035 | |
| 4 | L | A | 3.2389 | |
| 5 | Y | A | 3.4103 | |
| 6 | L | A | 3.5784 | |
| 7 | L | A | 4.0414 | |
| 8 | F | A | 4.4015 | |
| 9 | S | A | 4.4222 | |
| 10 | F | A | 5.2206 | |
| 11 | L | A | 5.3215 | |
| 12 | F | A | 5.7786 | |
| 13 | I | A | 5.8718 | |
| 14 | F | A | 5.4900 | |
| 15 | L | A | 4.9232 | |
| 16 | M | A | 3.9719 | |
| 17 | P | A | 2.1180 | |
| 18 | L | A | 2.5026 | |
| 19 | P | A | 0.9970 | |
| 20 | G | A | 1.2658 | |
| 21 | V | A | 2.4406 | |
| 22 | F | A | 2.2685 | |
| 23 | G | A | 0.6270 | |
| 24 | G | A | 0.1477 | |
| 25 | I | A | 0.1434 | |
| 26 | G | A | -0.6013 | |
| 27 | D | A | -0.3764 | |
| 28 | P | A | 0.5985 | |
| 29 | V | A | 1.5096 | |
| 30 | T | A | 0.1830 | |
| 31 | C | A | 0.0000 | |
| 32 | L | A | 1.2646 | |
| 33 | K | A | -0.5783 | |
| 34 | S | A | -0.2125 | |
| 35 | G | A | -0.6716 | |
| 36 | A | A | 0.0000 | |
| 37 | I | A | 0.7874 | |
| 38 | C | A | 0.9383 | |
| 39 | H | A | 0.4184 | |
| 40 | P | A | 0.9023 | |
| 41 | V | A | 2.1803 | |
| 42 | F | A | 1.9519 | |
| 43 | C | A | -0.2260 | |
| 44 | P | A | -1.3311 | |
| 45 | R | A | -2.7665 | |
| 46 | R | A | -3.3375 | |
| 47 | Y | A | -2.6302 | |
| 48 | K | A | -2.7207 | |
| 49 | Q | A | -1.6158 | |
| 50 | I | A | -0.7239 | |
| 51 | G | A | -0.8672 | |
| 52 | T | A | -0.7671 | |
| 53 | C | A | 0.0000 | |
| 54 | G | A | -0.2419 | |
| 55 | L | A | 0.6914 | |
| 56 | P | A | 0.2296 | |
| 57 | G | A | 0.3530 | |
| 58 | T | A | 0.5294 | |
| 59 | K | A | -0.1400 | |
| 60 | C | A | 0.0000 | |
| 61 | C | A | 0.0000 | |
| 62 | K | A | -2.0444 | |
| 63 | K | A | -3.2562 | |
| 64 | P | A | -2.6221 | |
| 65 | E | A | -2.6915 | |
| 66 | A | A | -1.2175 | |
| 67 | A | A | -0.4946 | |
| 68 | K | A | -1.1288 | |
| 69 | F | A | 1.5184 | |
| 70 | L | A | 0.7524 | |
| 71 | R | A | -1.8700 | |
| 72 | S | A | -1.9877 | |
| 73 | E | A | -3.7611 | |
| 74 | E | A | -3.5439 | |
| 75 | L | A | -1.3454 | |
| 76 | R | A | -3.0134 | |
| 77 | Q | A | -3.3377 | |
| 78 | R | A | -2.9736 | |
| 79 | L | A | -1.2021 | |
| 80 | M | A | -1.4009 | |
| 81 | S | A | -2.1697 | |
| 82 | E | A | -2.5771 | |
| 83 | S | A | -1.8603 | |
| 84 | E | A | -2.5139 | |
| 85 | A | A | -1.8545 | |
| 86 | A | A | -1.6228 | |
| 87 | S | A | -2.1132 | |
| 88 | E | A | -2.6898 | |
| 89 | S | A | -2.1255 | |
| 90 | R | A | -2.5768 | |
| 91 | S | A | -1.3769 | |
| 92 | P | A | -0.9720 | |
| 93 | S | A | -0.5553 | |
| 94 | A | A | 0.0396 | |
| 95 | A | A | 0.2985 | |
| 96 | A | A | 0.4875 | |
| 97 | M | A | 0.5966 | |
| 98 | G | A | -0.5954 | |
| 99 | P | A | -1.6206 | |
| 100 | E | A | -2.7751 | |
| 101 | T | A | -2.0158 | |
| 102 | S | A | -2.2587 | |
| 103 | K | A | -3.2877 | |
| 104 | K | A | -2.7334 | |
| 105 | I | A | -1.8696 | |
| 106 | K | A | -2.4052 | |
| 107 | L | A | -0.3388 | |
| 108 | L | A | -0.5347 | |
| 109 | P | A | -0.7236 | |
| 110 | K | A | -1.9038 | |
| 111 | G | A | -1.9101 | |
| 112 | D | A | -1.7286 | |
| 113 | L | A | -0.2038 | |
| 114 | T | A | -1.4110 | |
| 115 | D | A | -1.8370 | |
| 116 | I | A | -0.8656 | |
| 117 | G | A | -1.5342 | |
| 118 | D | A | -2.6088 | |
| 119 | K | A | -2.3245 | |
| 120 | G | A | -1.2189 | |
| 121 | V | A | -0.0908 | |
| 122 | N | A | -0.8843 | |
| 123 | L | A | 0.2932 | |
| 124 | S | A | -0.1914 | |
| 125 | G | A | -0.2266 | |
| 126 | G | A | -0.4661 | |
| 127 | Q | A | -1.3459 | |
| 128 | G | A | -0.8157 | |
| 129 | P | A | -0.2153 | |
| 130 | G | A | -0.4914 | |
| 131 | P | A | -0.2702 | |
| 132 | G | A | 0.1005 | |
| 133 | V | A | 1.4490 | |
| 134 | S | A | 0.7387 | |
| 135 | A | A | 1.2018 | |
| 136 | Y | A | 1.6770 | |
| 137 | S | A | 1.0175 | |
| 138 | F | A | 2.1334 | |
| 139 | S | A | 1.4927 | |
| 140 | I | A | 2.4302 | |
| 141 | T | A | 1.3931 | |
| 142 | A | A | 1.4599 | |
| 143 | Y | A | 1.7927 | |
| 144 | F | A | 0.9540 | |
| 145 | P | A | -0.5392 | |
| 146 | E | A | -1.8673 | |
| 147 | G | A | -1.5132 | |
| 148 | G | A | -0.9711 | |
| 149 | P | A | -0.5779 | |
| 150 | G | A | -0.4239 | |
| 151 | P | A | 0.1322 | |
| 152 | G | A | 0.7403 | |
| 153 | A | A | 1.1315 | |
| 154 | L | A | 1.6440 | |
| 155 | Q | A | 0.0605 | |
| 156 | L | A | 1.3012 | |
| 157 | M | A | 1.0094 | |
| 158 | G | A | 0.0228 | |
| 159 | G | A | -0.4919 | |
| 160 | T | A | -0.6528 | |
| 161 | P | A | -0.9651 | |
| 162 | R | A | -1.9035 | |
| 163 | S | A | -0.8380 | |
| 164 | V | A | 0.1574 | |
| 165 | D | A | -1.4564 | |
| 166 | G | A | -0.9822 | |
| 167 | P | A | -0.7104 | |
| 168 | A | A | -0.3998 | |
| 169 | A | A | 0.6936 | |
| 170 | Y | A | 1.7383 | |
| 171 | V | A | 2.0735 | |
| 172 | L | A | 1.8106 | |
| 173 | F | A | 1.8475 | |
| 174 | S | A | -0.2577 | |
| 175 | G | A | -0.4974 | |
| 176 | T | A | -0.5729 | |
| 177 | L | A | -0.5004 | |
| 178 | R | A | -1.4945 | |
| 179 | F | A | -0.2316 | |
| 180 | G | A | -0.6068 | |
| 181 | P | A | -0.6522 | |
| 182 | G | A | -0.6936 | |
| 183 | P | A | -0.5278 | |
| 184 | G | A | -0.2084 | |
| 185 | I | A | 0.8600 | |
| 186 | Q | A | -0.8523 | |
| 187 | H | A | -0.4360 | |
| 188 | T | A | -0.7293 | |
| 189 | V | A | 0.0000 | |
| 190 | R | A | -1.9628 | |
| 191 | N | A | -1.6840 | |
| 192 | E | A | -1.9430 | |
| 193 | F | A | 0.5495 |