Project name: query_structure

Status: done

Started: 2026-03-16 23:26:55
Settings
Chain sequence(s) A: GLPVCGESCFGGTCNTPGCACDPWPVCTRD
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimalization                                        (00:00:00)
[INFO]       Analysis: Starting Aggrescan3D on folded.pdb                                          (00:00:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:06)
Show buried residues

Minimal score value
-2.3987
Maximal score value
1.7564
Average score
-0.3293
Total score value
-9.8779

The table below lists A3D score for protein residues. Residues with A3D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan3D score mutation
residue index residue name chain Aggrescan3D score
mutation
1 G A -0.9948
2 L A 0.9920
3 P A 0.2981
4 V A 1.3431
5 C A 0.1769
6 G A -0.1570
7 E A -0.5057
8 S A 0.0906
9 C A 0.0000
10 F A 1.7564
11 G A 0.2273
12 G A 0.1579
13 T A -0.1963
14 C A -0.8421
15 N A -1.4601
16 T A -1.1655
17 P A -0.9355
18 G A -1.3573
19 C A -1.2734
20 A A -1.3198
21 C A -0.5382
22 D A -1.8119
23 P A -0.5219
24 W A 0.9077
25 P A 0.8951
26 V A 0.7123
27 C A 0.0000
28 T A 0.0000
29 R A -1.9571
30 D A -2.3987
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Laboratory of Theory of Biopolymers 2018